miRNEST 2.0, an integrative microRNA resource :: BLAST
>46130_miR319:micropc
Length = 176
Score = 276 bits (139), Expect = 6e-75
Identities = 169/178 (94%), Gaps = 2/178 (1%)
Strand = Plus / Plus
Query: 18 aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 60
Query: 78 gatacctctctggtgcagcaatggccgctgctcacctctgcacttgcatgggtgtgcatg 137
||| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||
Sbjct: 61 gatgcctctctggtgcagcaatgactaatgctcac--ctgcacttgcatgggtgtgcatg 118
Query: 138 acccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctcct 195
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 acccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcct 176
>45648_miR159:micropc
Length = 176
Score = 276 bits (139), Expect = 6e-75
Identities = 169/178 (94%), Gaps = 2/178 (1%)
Strand = Plus / Plus
Query: 18 aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatg 60
Query: 78 gatacctctctggtgcagcaatggccgctgctcacctctgcacttgcatgggtgtgcatg 137
||| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||
Sbjct: 61 gatgcctctctggtgcagcaatgactaatgctcac--ctgcacttgcatgggtgtgcatg 118
Query: 138 acccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctcct 195
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 acccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcct 176
>45590_miR319:micropc
Length = 173
Score = 270 bits (136), Expect = 4e-73
Identities = 166/175 (94%), Gaps = 2/175 (1%)
Strand = Plus / Plus
Query: 20 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
Query: 80 tacctctctggtgcagcaatggccgctgctcacctctgcacttgcatgggtgtgcatgac 139
| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||
Sbjct: 61 tgcctctctggtgcagcaatgactaatgctcac--ctgcacttgcatgggtgtgcatgac 118
Query: 140 ccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctcc 194
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcc 173
>45258_miR319:micropc
Length = 173
Score = 270 bits (136), Expect = 4e-73
Identities = 166/175 (94%), Gaps = 2/175 (1%)
Strand = Plus / Plus
Query: 20 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
Query: 80 tacctctctggtgcagcaatggccgctgctcacctctgcacttgcatgggtgtgcatgac 139
| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||
Sbjct: 61 tgcctctctggtgcagcaatgactaatgctcac--ctgcacttgcatgggtgtgcatgac 118
Query: 140 ccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctcc 194
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctcc 173
>46497_miR159:micropc
Length = 172
Score = 268 bits (135), Expect = 2e-72
Identities = 165/174 (94%), Gaps = 2/174 (1%)
Strand = Plus / Plus
Query: 20 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
Query: 80 tacctctctggtgcagcaatggccgctgctcacctctgcacttgcatgggtgtgcatgac 139
| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||
Sbjct: 61 tgcctctctggtgcagcaatgactaatgctcac--ctgcacttgcatgggtgtgcatgac 118
Query: 140 ccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctc 193
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 172
>45773_miR159:micropc
Length = 172
Score = 268 bits (135), Expect = 2e-72
Identities = 165/174 (94%), Gaps = 2/174 (1%)
Strand = Plus / Plus
Query: 20 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagctcccttcgatccaatccaggaggggaagtggtcggttgcagctgccggttcatgga 60
Query: 80 tacctctctggtgcagcaatggccgctgctcacctctgcacttgcatgggtgtgcatgac 139
| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||
Sbjct: 61 tgcctctctggtgcagcaatgactaatgctcac--ctgcacttgcatgggtgtgcatgac 118
Query: 140 ccgggagatgagcccgccatcatctttccctcgtgcttggattgaagggagctc 193
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 119 ccgggagatgaacccaccatcatctttccctcgtgcttggattgaagggagctc 172
>46779_miR159:micropc
Length = 164
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 19 agagctcccttcgatccaat 38
||||||||||||||||||||
Sbjct: 164 agagctcccttcgatccaat 145
>46495_miR319:micropc
Length = 191
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 175 cttggattgaagggagctcc 194
||||||||||||||||||||
Sbjct: 20 cttggattgaagggagctcc 1
>46281_miR319:micropc
Length = 184
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 172 gtgcttggattgaagggagctcct 195
||||||||| ||||||||||||||
Sbjct: 160 gtgcttggactgaagggagctcct 183
>46127_miR319:micropc
Length = 182
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 172 gtgcttggattgaagggagctcct 195
||||||||| ||||||||||||||
Sbjct: 159 gtgcttggactgaagggagctcct 182
>45391_miR159:micropc
Length = 165
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 19 agagctcccttcgatccaat 38
||||||||||||||||||||
Sbjct: 164 agagctcccttcgatccaat 145
>44971_miR319:micropc
Length = 195
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 175 cttggattgaagggagctcc 194
||||||||||||||||||||
Sbjct: 20 cttggattgaagggagctcc 1
