miRNEST 2.0, an integrative microRNA resource :: BLAST
>46833_miR446:micropc
Length = 81
Score = 85.7 bits (43), Expect = 1e-17
Identities = 67/74 (90%), Gaps = 2/74 (2%)
Strand = Plus / Minus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatatatatatgtctagattca 105
||||||||||| |||||||||||||||||| ||||||| |||| ||||||||||||||
Sbjct: 80 attttccacattcatattgatgttaatgaatttagatag--atatgtatgtctagattca 23
Query: 106 ttgacatcaatata 119
|| |||||||||||
Sbjct: 22 ttaacatcaatata 9
Score = 54.0 bits (27), Expect = 4e-08
Identities = 54/62 (87%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 57 atatattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaat 116
|||||||||||||||||||||||| | ||| |||| | |||| ||||||| ||||||||
Sbjct: 8 atatattgatgttaatgaatctag--acatacatatctatctaaattcattaacatcaat 65
Query: 117 at 118
||
Sbjct: 66 at 67
>45708_miR809:micropc
Length = 100
Score = 83.8 bits (42), Expect = 4e-17
Identities = 66/73 (90%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 22 atattgatattaatgaatctagatag--atatatatgtctagattcattagcatcaatat 79
Query: 119 agatatgagaaat 131
| || ||||||||
Sbjct: 80 aaatgtgagaaat 92
Score = 58.0 bits (29), Expect = 2e-09
Identities = 68/80 (85%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 52 cacatatatattgatgttaatgaatctagatagatatatatatgtctagattcattgaca 111
||||| |||||||||| |||||||||||| | |||||||| | |||||||||||| | |
Sbjct: 86 cacatttatattgatgctaatgaatctag--acatatatatctatctagattcattaata 29
Query: 112 tcaatatagatatgagaaat 131
||||||| |||||| ||||
Sbjct: 28 tcaatatgaatatgaaaaat 9
>46801_miR809:micropc
Length = 110
Score = 77.8 bits (39), Expect = 3e-15
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatatatatatgtctagattca 105
|||| |||||| ||||| |||||||||||||||||||| |||||||||| ||||||||
Sbjct: 9 atttcccacattcatattaatgttaatgaatctagatag--atatatatgtttagattca 66
Query: 106 ttgacatcaatata 119
|| |||||||||||
Sbjct: 67 ttaacatcaatata 80
Score = 52.0 bits (26), Expect = 1e-07
Identities = 53/61 (86%), Gaps = 2/61 (3%)
Strand = Plus / Minus
Query: 58 tatattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaata 117
||||||||||||||||||||| | | |||||||| | |||||||||||| |||| ||||
Sbjct: 80 tatattgatgttaatgaatct--aaacatatatatctatctagattcattaacattaata 23
Query: 118 t 118
|
Sbjct: 22 t 22
>46637_miR446:micropc
Length = 80
Score = 73.8 bits (37), Expect = 4e-14
Identities = 55/60 (91%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
|||||||||||||||||||||| ||||||| ||||||||||||||||| |||| |||||
Sbjct: 68 atattgatgttaatgaatctagctagatat--atatgtctagattcattaacattaatat 11
Score = 50.1 bits (25), Expect = 6e-07
Identities = 52/60 (86%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
||||| |||||||||||||||| | |||||||| | ||||||||||| ||||||||||
Sbjct: 11 atattaatgttaatgaatctag--acatatatatctagctagattcattaacatcaatat 68
>46758_miR808:micropc
Length = 98
Score = 67.9 bits (34), Expect = 2e-12
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
||||| |||||||||||||||||| | |||||||||||||||||| || |||||||||
Sbjct: 78 atattaatgttaatgaatctagatgg--atatatatgtctagattcgttagcatcaatat 21
Query: 119 agatatgagaaat 131
|||||||||||
Sbjct: 20 gaatatgagaaat 8
>45522_miR809:micropc
Length = 100
Score = 67.9 bits (34), Expect = 2e-12
Identities = 49/53 (92%), Gaps = 2/53 (3%)
Strand = Plus / Minus
Query: 62 ttgatgttaatgaatctagatagatatatatatgtctagattcattgacatca 114
||||||||||||||||||||||| ||| ||||||||||||||||| ||||||
Sbjct: 76 ttgatgttaatgaatctagatag--atacatatgtctagattcattaacatca 26
Score = 46.1 bits (23), Expect = 9e-06
Identities = 59/70 (84%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatatatatatgtctagattca 105
||||||||||| || |||||||||||||||||| | |||| ||| | ||||||||||
Sbjct: 9 attttccacattcgtaatgatgttaatgaatctag--acatatgtatctatctagattca 66
Query: 106 ttgacatcaa 115
|| |||||||
Sbjct: 67 ttaacatcaa 76
>45342_miR809:micropc
Length = 100
Score = 67.9 bits (34), Expect = 2e-12
Identities = 64/73 (87%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
||||| |||||||||||||||||| | |||||||||||||||||| || |||||||||
Sbjct: 79 atattaatgttaatgaatctagatgg--atatatatgtctagattcgttagcatcaatat 22
Query: 119 agatatgagaaat 131
|||||||||||
Sbjct: 21 gaatatgagaaat 9
>46775_miR808:micropc
Length = 98
Score = 61.9 bits (31), Expect = 1e-10
Identities = 51/57 (89%), Gaps = 3/57 (5%)
Strand = Plus / Plus
Query: 62 ttgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
||||||||||| ||||||||||||||||||| | |||||||||| ||||||||||
Sbjct: 25 ttgatgttaataaatctagatagatatatat---tttagattcattaacatcaatat 78
Score = 48.1 bits (24), Expect = 2e-06
Identities = 59/70 (84%), Gaps = 3/70 (4%)
Strand = Plus / Minus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatatatatatgtctagattca 105
|||| |||||| ||||||||||||||||||||| | |||||||| | |||||||| |
Sbjct: 91 atttcccacattcatattgatgttaatgaatcta---aaatatatatctatctagattta 35
Query: 106 ttgacatcaa 115
|| |||||||
Sbjct: 34 ttaacatcaa 25
>45995_miR446:micropc
Length = 86
Score = 61.9 bits (31), Expect = 1e-10
Identities = 51/57 (89%), Gaps = 3/57 (5%)
Strand = Plus / Plus
Query: 62 ttgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
||||||||||| ||||||||||||||||||| | |||||||||| ||||||||||
Sbjct: 19 ttgatgttaataaatctagatagatatatat---tttagattcattaacatcaatat 72
Score = 48.1 bits (24), Expect = 2e-06
Identities = 59/70 (84%), Gaps = 3/70 (4%)
Strand = Plus / Minus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatatatatatgtctagattca 105
|||| |||||| ||||||||||||||||||||| | |||||||| | |||||||| |
Sbjct: 85 atttcccacattcatattgatgttaatgaatcta---aaatatatatctatctagattta 29
Query: 106 ttgacatcaa 115
|| |||||||
Sbjct: 28 ttaacatcaa 19
>45913_miR809:micropc
Length = 100
Score = 61.9 bits (31), Expect = 1e-10
Identities = 51/57 (89%), Gaps = 3/57 (5%)
Strand = Plus / Plus
Query: 62 ttgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
||||||||||| ||||||||||||||||||| | |||||||||| ||||||||||
Sbjct: 26 ttgatgttaataaatctagatagatatatat---tttagattcattaacatcaatat 79
Score = 48.1 bits (24), Expect = 2e-06
Identities = 59/70 (84%), Gaps = 3/70 (4%)
Strand = Plus / Minus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatatatatatgtctagattca 105
|||| |||||| ||||||||||||||||||||| | |||||||| | |||||||| |
Sbjct: 92 atttcccacattcatattgatgttaatgaatcta---aaatatatatctatctagattta 36
Query: 106 ttgacatcaa 115
|| |||||||
Sbjct: 35 ttaacatcaa 26
>45717_miR446:micropc
Length = 86
Score = 61.9 bits (31), Expect = 1e-10
Identities = 51/57 (89%), Gaps = 3/57 (5%)
Strand = Plus / Plus
Query: 62 ttgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
||||||||||| ||||||||||||||||||| | |||||||||| ||||||||||
Sbjct: 19 ttgatgttaataaatctagatagatatatat---tttagattcattaacatcaatat 72
Score = 48.1 bits (24), Expect = 2e-06
Identities = 59/70 (84%), Gaps = 3/70 (4%)
Strand = Plus / Minus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatatatatatgtctagattca 105
|||| |||||| ||||||||||||||||||||| | |||||||| | |||||||| |
Sbjct: 85 atttcccacattcatattgatgttaatgaatcta---aaatatatatctatctagattta 29
Query: 106 ttgacatcaa 115
|| |||||||
Sbjct: 28 ttaacatcaa 19
>45176_miR446:micropc
Length = 86
Score = 61.9 bits (31), Expect = 1e-10
Identities = 51/57 (89%), Gaps = 3/57 (5%)
Strand = Plus / Plus
Query: 62 ttgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaatat 118
||||||||||| ||||||||||||||||||| | |||||||||| ||||||||||
Sbjct: 19 ttgatgttaataaatctagatagatatatat---tttagattcattaacatcaatat 72
Score = 48.1 bits (24), Expect = 2e-06
Identities = 59/70 (84%), Gaps = 3/70 (4%)
Strand = Plus / Minus
Query: 46 attttccacatatatattgatgttaatgaatctagatagatatatatatgtctagattca 105
|||| |||||| ||||||||||||||||||||| | |||||||| | |||||||| |
Sbjct: 85 atttcccacattcatattgatgttaatgaatcta---aaatatatatctatctagattta 29
Query: 106 ttgacatcaa 115
|| |||||||
Sbjct: 28 ttaacatcaa 19
>46318_miR446:micropc
Length = 86
Score = 60.0 bits (30), Expect = 6e-10
Identities = 54/61 (88%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 58 tatattgatgttaatgaatctagatagatatatatatgtctagattcattgacatcaata 117
|||| ||||||||||||||||| |||| ||||||||||||||||| ||| || ||||||
Sbjct: 14 tataatgatgttaatgaatctatatag--atatatatgtctagatttattaacgtcaata 71
Query: 118 t 118
|
Sbjct: 72 t 72
>46080_miR809:micropc
Length = 99
Score = 58.0 bits (29), Expect = 2e-09
Identities = 78/92 (84%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 40 tttagtattttccacatatatattgatgttaatgaatctagatagatatatatatgtcta 99
|||||||||| |||||| ||||||||| | |||| ||||||||||||| |||||||||
Sbjct: 3 tttagtatttcccacattcatattgatgctgatga-tctagatagatat--atatgtcta 59
Query: 100 gattcattgacatcaatatagatatgagaaat 131
||||||| ||||||||| || ||||||||
Sbjct: 60 tattcattaccatcaatatgaatgtgagaaat 91
>45707_miR809:micropc
Length = 99
Score = 58.0 bits (29), Expect = 2e-09
Identities = 78/92 (84%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 40 tttagtattttccacatatatattgatgttaatgaatctagatagatatatatatgtcta 99
|||||||||| |||||| ||||||||| | |||| ||||||||||||| |||||||||
Sbjct: 3 tttagtatttcccacattcatattgatgctgatga-tctagatagatat--atatgtcta 59
Query: 100 gattcattgacatcaatatagatatgagaaat 131
||||||| ||||||||| || ||||||||
Sbjct: 60 tattcattaccatcaatatgaatgtgagaaat 91
>46589_miR809:micropc
Length = 100
Score = 56.0 bits (28), Expect = 9e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 53 acatatatattgatgttaatgaatctagatagatatatat 92
|||| |||| |||||||||| |||||||||||||||||||
Sbjct: 16 acatttataatgatgttaataaatctagatagatatatat 55
>46060_miR809:micropc
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 46 attttccacatatatattgatgttaatgaatctaga 81
|||||||| || |||||||||||||||||||||||
Sbjct: 9 attttccatattcatattgatgttaatgaatctaga 44
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 52 cacatatatattgatgttaatgaatctag 80
||||| ||||||||||||||| |||||||
Sbjct: 73 cacatttatattgatgttaataaatctag 45
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 95 gtctagattcattgacatcaatat 118
||||||||||||| ||||||||||
Sbjct: 45 gtctagattcattaacatcaatat 22
>45731_miR446:micropc
Length = 86
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 59 atattgatgttaatgaatctaga 81
|||||||||||||||||||||||
Sbjct: 72 atattgatgttaatgaatctaga 50
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 85 atatatatatgtctagattcattgacatcaatat 118
|||||| | |||||||||||||| ||||||||||
Sbjct: 39 atatatgtgtgtctagattcattaacatcaatat 72
>46468_miR446:micropc
Length = 77
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 46 attttccacatatatattgatgttaatgaa 75
|||| |||||| ||||||||||||||||||
Sbjct: 1 atttcccacatttatattgatgttaatgaa 30
