miRNEST 2.0, an integrative microRNA resource :: BLAST
>44978_miR1130:micropc
Length = 144
Score = 93.7 bits (47), Expect = 5e-20
Identities = 92/106 (86%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 62 tattcatatagatgttagtaaatctatacaaatatgtgtc--tagatttattaacatata 119
||||||||||||||| | |||||||| ||| |||||||| |||||| |||| ||||||
Sbjct: 106 tattcatatagatgtcaataaatctaaacatatatgtgtgcttagattcattagcatata 47
Query: 120 tataaatatgagcaatgctagaaagtcttgtattatgaaacggagg 165
||||||| || ||||||||||||||||| |||||||||||||||
Sbjct: 46 tataaatgtggacaatgctagaaagtcttacattatgaaacggagg 1
Score = 65.9 bits (33), Expect = 1e-11
Identities = 117/144 (81%), Gaps = 2/144 (1%)
Strand = Plus / Plus
Query: 24 cctccgttttataatgcaagtctttttagtattgtccatattcatatagatgttagtaaa 83
||||||||| |||||| ||| |||| ||| |||||||| ||| ||||| ||| || | ||
Sbjct: 1 cctccgtttcataatgtaagactttctagcattgtccacatttatatatatgctaatgaa 60
Query: 84 tctat--acaaatatgtgtctagatttattaacatatatataaatatgagcaatgctaga 141
|||| ||| |||| ||| |||||||||| |||| ||||| |||| | |||||||||
Sbjct: 61 tctaagcacacatatatgtttagatttattgacatctatatgaatacaggtaatgctaga 120
Query: 142 aagtcttgtattatgaaacggagg 165
||||||| |||||||||| ||||
Sbjct: 121 aagtcttacattatgaaacagagg 144
>45260_miR819:micropc
Length = 116
Score = 89.7 bits (45), Expect = 7e-19
Identities = 89/104 (85%)
Strand = Plus / Minus
Query: 45 ctttttagtattgtccatattcatatagatgttagtaaatctatacaaatatgtgtctag 104
|||| |||||| ||||||||| |||||||||||| | ||| || ||| |||| ||| |||
Sbjct: 108 ctttctagtatngtccatatttatatagatgttaatgaatatagacacatatatgtttag 49
Query: 105 atttattaacatatatataaatatgagcaatgctagaaagtctt 148
||| |||||||||||||| |||||| ||||||||||||||||
Sbjct: 48 attcattaacatatatatgaatatggataatgctagaaagtctt 5
Score = 89.7 bits (45), Expect = 7e-19
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 45 ctttttagtattgtccatattcatatagatgttagtaaatctatacaaatatgtgtctag 104
|||| ||| ||| |||||||||||||| |||||| | |||||| ||| |||||||||||
Sbjct: 9 ctttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctat 68
Query: 105 atttattaacatatatataaatatgagcaatgctagaaagtctt 148
||| |||||||| |||||||||||| | || ||||||||||||
Sbjct: 69 attcattaacatctatataaatatggacnatactagaaagtctt 112
>45075_miR819:micropc
Length = 116
Score = 89.7 bits (45), Expect = 7e-19
Identities = 89/104 (85%)
Strand = Plus / Minus
Query: 45 ctttttagtattgtccatattcatatagatgttagtaaatctatacaaatatgtgtctag 104
|||| |||||| ||||||||| |||||||||||| | ||| || ||| |||| ||| |||
Sbjct: 108 ctttctagtatngtccatatttatatagatgttaatgaatatagacacatatatgtttag 49
Query: 105 atttattaacatatatataaatatgagcaatgctagaaagtctt 148
||| |||||||||||||| |||||| ||||||||||||||||
Sbjct: 48 attcattaacatatatatgaatatggataatgctagaaagtctt 5
Score = 89.7 bits (45), Expect = 7e-19
Identities = 89/104 (85%)
Strand = Plus / Plus
Query: 45 ctttttagtattgtccatattcatatagatgttagtaaatctatacaaatatgtgtctag 104
|||| ||| ||| |||||||||||||| |||||| | |||||| ||| |||||||||||
Sbjct: 9 ctttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctat 68
Query: 105 atttattaacatatatataaatatgagcaatgctagaaagtctt 148
||| |||||||| |||||||||||| | || ||||||||||||
Sbjct: 69 attcattaacatctatataaatatggacnatactagaaagtctt 112
>45215_miR1120:micropc
Length = 142
Score = 69.9 bits (35), Expect = 7e-13
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 94 tatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtatt 153
||||||| || ||| |||||||| ||||| |||||||||||| |||||| |||| ||||
Sbjct: 72 tatgtgtttaaattcattaacatctatatgtatatgagcaatgttagaaattcttatatt 131
Query: 154 atgaaacggag 164
|||||||||||
Sbjct: 132 atgaaacggag 142
Score = 50.1 bits (25), Expect = 6e-07
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 100 tctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtattatgaaa 159
|||||||| ||||||||||| || || || ||||||||||||||| || ||||| |||
Sbjct: 65 tctagattcattaacatataaatgaacgtgggcaatgctagaaagttttacattataaaa 6
Query: 160 cggag 164
|||||
Sbjct: 5 cggag 1
>46464_miR1132:micropc
Length = 149
Score = 63.9 bits (32), Expect = 4e-11
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||||||| |||||| |||||| | |||||||||||| | | ||||||||| || | ||
Sbjct: 74 atatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctacat 133
Query: 153 tatgaaacggagggag 168
||||||||||||||||
Sbjct: 134 tatgaaacggagggag 149
Score = 58.0 bits (29), Expect = 2e-09
Identities = 89/108 (82%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 59 ccatattcatatagatgttagtaaatctatacaaatatgtgt--ctagatttattaacat 116
||||||| ||||||| |||| | |||||| ||| |||| | | ||||||| ||||| ||
Sbjct: 111 ccatatttatatagaagttaatgaatctaaacacatatatatgcctagattcattaatat 52
Query: 117 atatataaatatgagcaatgctagaaagtcttgtattatgaaacggag 164
||||| |||||| ||||||||||||||| || ||| ||||||||||
Sbjct: 51 ctatatgaatatgtgcaatgctagaaagtattacattgtgaaacggag 4
>45514_miR1132:micropc
Length = 149
Score = 63.9 bits (32), Expect = 4e-11
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||||||| |||||| |||||| | |||||||||||| | | ||||||||| || | ||
Sbjct: 74 atatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctacat 133
Query: 153 tatgaaacggagggag 168
||||||||||||||||
Sbjct: 134 tatgaaacggagggag 149
Score = 58.0 bits (29), Expect = 2e-09
Identities = 89/108 (82%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 59 ccatattcatatagatgttagtaaatctatacaaatatgtgt--ctagatttattaacat 116
||||||| ||||||| |||| | |||||| ||| |||| | | ||||||| ||||| ||
Sbjct: 111 ccatatttatatagaagttaatgaatctaaacacatatatatgcctagattcattaatat 52
Query: 117 atatataaatatgagcaatgctagaaagtcttgtattatgaaacggag 164
||||| |||||| ||||||||||||||| || ||| ||||||||||
Sbjct: 51 ctatatgaatatgtgcaatgctagaaagtattacattgtgaaacggag 4
>45099_miR1132:micropc
Length = 149
Score = 63.9 bits (32), Expect = 4e-11
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 93 atatgtgtctagatttattaacatatatataaatatgagcaatgctagaaagtcttgtat 152
|||||||| |||||| |||||| | |||||||||||| | | ||||||||| || | ||
Sbjct: 74 atatgtgtttagattcattaacttctatataaatatgggtagtgctagaaaatcctacat 133
Query: 153 tatgaaacggagggag 168
||||||||||||||||
Sbjct: 134 tatgaaacggagggag 149
Score = 58.0 bits (29), Expect = 2e-09
Identities = 89/108 (82%), Gaps = 2/108 (1%)
Strand = Plus / Minus
Query: 59 ccatattcatatagatgttagtaaatctatacaaatatgtgt--ctagatttattaacat 116
||||||| ||||||| |||| | |||||| ||| |||| | | ||||||| ||||| ||
Sbjct: 111 ccatatttatatagaagttaatgaatctaaacacatatatatgcctagattcattaatat 52
Query: 117 atatataaatatgagcaatgctagaaagtcttgtattatgaaacggag 164
||||| |||||| ||||||||||||||| || ||| ||||||||||
Sbjct: 51 ctatatgaatatgtgcaatgctagaaagtattacattgtgaaacggag 4
>45687_miR819:micropc
Length = 84
Score = 58.0 bits (29), Expect = 2e-09
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 109 attaacatatatataaatatgagcaatgctagaaagtcttgtattatga 157
|||||||||||||| ||| || |||||||||||||||||| || |||||
Sbjct: 36 attaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 84
>46670_miR809:micropc
Length = 97
Score = 54.0 bits (27), Expect = 4e-08
Identities = 67/78 (85%), Gaps = 3/78 (3%)
Strand = Plus / Plus
Query: 47 ttttagtattgtccatattcatatagatgttagtaaatctatacaaa--tatgtgtctag 104
|||||| |||||| ||||||| |||||||||| |||||||| ||| | ||| ||||||
Sbjct: 1 ttttagcattgtctatattca-atagatgttaataaatctagacacacatatatgtctac 59
Query: 105 atttattaacatatatat 122
||| ||||||||||||||
Sbjct: 60 attcattaacatatatat 77
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 96 tgtgtctagatttattaacat 116
|||||||||||||||||||||
Sbjct: 46 tgtgtctagatttattaacat 26
>46437_miR1436:micropc
Length = 108
Score = 54.0 bits (27), Expect = 4e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 131 gcaatgctagaaagtcttgtattatgaaacggagggagt 169
||||||||||||| |||| |||||||||||||||||||
Sbjct: 70 gcaatgctagaaaatcttacattatgaaacggagggagt 108
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 124 aatatgagcaatgctagaaagtctt 148
|||||||||||||||||||||||||
Sbjct: 46 aatatgagcaatgctagaaagtctt 22
>44980_miR808:micropc
Length = 97
Score = 54.0 bits (27), Expect = 4e-08
Identities = 67/78 (85%), Gaps = 3/78 (3%)
Strand = Plus / Plus
Query: 47 ttttagtattgtccatattcatatagatgttagtaaatctatacaaa--tatgtgtctag 104
|||||| |||||| ||||||| |||||||||| |||||||| ||| | ||| ||||||
Sbjct: 1 ttttagcattgtctatattca-atagatgttaataaatctagacacacatatatgtctac 59
Query: 105 atttattaacatatatat 122
||| ||||||||||||||
Sbjct: 60 attcattaacatatatat 77
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 96 tgtgtctagatttattaacat 116
|||||||||||||||||||||
Sbjct: 46 tgtgtctagatttattaacat 26
>46060_miR809:micropc
Length = 87
Score = 52.0 bits (26), Expect = 2e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 101 ctagatttattaacatatatataaatatgagcaatgctagaa 142
|||||||||||||||| |||||||| |||| ||||||||||
Sbjct: 45 ctagatttattaacatcaatataaatgtgagaaatgctagaa 86
>45731_miR446:micropc
Length = 86
Score = 52.0 bits (26), Expect = 2e-07
Identities = 56/65 (86%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 54 attgtccatattcatatagatgttagtaaatctatacaaata--tgtgtctagatttatt 111
|||||||| |||||||||||| ||| | |||||| ||| ||| |||||||||||| |||
Sbjct: 2 attgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcatt 61
Query: 112 aacat 116
|||||
Sbjct: 62 aacat 66
>44937_miR819:micropc
Length = 94
Score = 46.1 bits (23), Expect = 9e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 115 atatatataaatatgagcaatgctagaaagtcttgtattatga 157
||||||||||||||| ||||| ||||||||||| || |||||
Sbjct: 52 atatatataaatatgggcaataatagaaagtcttataatatga 94
>46637_miR446:micropc
Length = 80
Score = 42.1 bits (21), Expect = 1e-04
Identities = 51/60 (85%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 59 ccatattcatatagatgttagtaaatcta--tacaaatatgtgtctagatttattaacat 116
|||||||||||| ||||||| | |||||| || | |||| |||||||||| ||||||||
Sbjct: 76 ccatattcatattgatgttaatgaatctagctagatatatatgtctagattcattaacat 17
