miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>44978_miR1130:micropc
          Length = 144

 Score = 79.8 bits (40), Expect = 6e-16
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                           
Query: 76  tatataaatgtggacaatgctagaaagtcttataatatgaaacggagg 123
           |||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 48  tatataaatgtggacaatgctagaaagtcttacattatgaaacggagg 1



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                    
Query: 40 tttcatattgtaagactttatggcattgcccacatctatata 81
          ||||||| ||||||||||| | |||||| |||||| ||||||
Sbjct: 7  tttcataatgtaagactttctagcattgtccacatttatata 48



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 91  aatgctagaaagtcttataatatgaaacggagg 123
           ||||||||||||||||| | |||||||| ||||
Sbjct: 112 aatgctagaaagtcttacattatgaaacagagg 144




>45687_miR819:micropc
          Length = 84

 Score = 65.9 bits (33), Expect = 8e-12
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                        
Query: 71  acatctatataaatgtggacaatgctagaaagtcttataatatga 115
           |||| ||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 40  acatatatatgaatgtgggcaatgctagaaagtcttataatatga 84



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                           
Query: 42 tcatattgtaagactttatggcattgcccacat 74
          ||||||| ||||||||| | |||||||||||||
Sbjct: 84 tcatattataagactttctagcattgcccacat 52




>45260_miR819:micropc
          Length = 116

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 71  acatctatataaatgtggacaatgctagaaagtcttataa 110
           |||||||||||||| ||||| || ||||||||||||||||
Sbjct: 77  acatctatataaatatggacnatactagaaagtcttataa 116



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 71  acatctatataaatgtggacaatgctagaaagtcttataa 110
           |||| ||||| ||| |||| ||||||||||||||||||||
Sbjct: 40  acatatatatgaatatggataatgctagaaagtcttataa 1




>45075_miR819:micropc
          Length = 116

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 71  acatctatataaatgtggacaatgctagaaagtcttataa 110
           |||||||||||||| ||||| || ||||||||||||||||
Sbjct: 77  acatctatataaatatggacnatactagaaagtcttataa 116



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 71  acatctatataaatgtggacaatgctagaaagtcttataa 110
           |||| ||||| ||| |||| ||||||||||||||||||||
Sbjct: 40  acatatatatgaatatggataatgctagaaagtcttataa 1




>46437_miR1436:micropc
          Length = 108

 Score = 56.0 bits (28), Expect = 8e-09
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 73  atctatataaatgtggacaatgctagaaagtcttataatatgaaacggaggg 124
           ||||||||  |||||| |||||||||||| ||||| | ||||||||||||||
Sbjct: 54  atctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggaggg 105




>45603_miR819:micropc
          Length = 61

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 77  atataaatgtggacaatgctagaaagtcttataa 110
           |||| ||||||| |||||||||||||||||||||
Sbjct: 39  atatgaatgtgggcaatgctagaaagtcttataa 6




>44937_miR819:micropc
          Length = 94

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 76  tatataaatgtggacaatgctagaaagtcttataatatga 115
           ||||||||| ||| ||||  ||||||||||||||||||||
Sbjct: 55  tatataaatatgggcaataatagaaagtcttataatatga 94




>45215_miR1120:micropc
          Length = 142

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 90  caatgctagaaagtcttataatatgaaacggag 122
           ||||| |||||| ||||||| ||||||||||||
Sbjct: 110 caatgttagaaattcttatattatgaaacggag 142