miRNEST 2.0, an integrative microRNA resource :: BLAST
>46801_miR809:micropc
Length = 110
Score = 95.6 bits (48), Expect = 1e-20
Identities = 67/72 (93%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 48 atttatattgatgttaatgaatctaaacatatatatttatcctagatccattaatattaa 107
|||||||||||||||||||||||||||||||||||| ||| |||||| |||||| |||||
Sbjct: 83 atttatattgatgttaatgaatctaaacatatatatctat-ctagattcattaacattaa 25
Query: 108 tatgactgtggg 119
||||| ||||||
Sbjct: 24 tatgaatgtggg 13
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 31 attctagcattttccatatttatattgatgttaatgaatcta 72
|||||| ||||| ||| ||| ||||| |||||||||||||||
Sbjct: 1 attctatcatttcccacattcatattaatgttaatgaatcta 42
>46060_miR809:micropc
Length = 87
Score = 75.8 bits (38), Expect = 9e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 31 attctagcattttccatatttatattgatgttaatgaatcta 72
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 attctagcattttccatattcatattgatgttaatgaatcta 42
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 31 attctagcattttccatatttatattgatgttaatgaatcta 72
|||||||||||| || |||||||||||||||||| ||||||
Sbjct: 87 attctagcatttctcacatttatattgatgttaataaatcta 46
>45708_miR809:micropc
Length = 100
Score = 73.8 bits (37), Expect = 4e-14
Identities = 59/65 (90%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 48 atttatattgatgttaatgaatctaaacatatatatttatcctagatccattaatattaa 107
||||||||||||| ||||||||||| |||||||||| ||| |||||| ||||||||| ||
Sbjct: 83 atttatattgatgctaatgaatctagacatatatatctat-ctagattcattaatatcaa 25
Query: 108 tatga 112
|||||
Sbjct: 24 tatga 20
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 31 attctagcattttccatatttatattgatgttaatgaatcta 72
|||||| |||||| |||||| |||||||| ||||||||||||
Sbjct: 1 attctaacatttttcatattcatattgatattaatgaatcta 42
>46464_miR1132:micropc
Length = 149
Score = 69.9 bits (35), Expect = 6e-13
Identities = 84/99 (84%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 6 ctccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaat 65
|||||||||||||| |||||| | |||||||| | |||||||||||| || ||||||
Sbjct: 149 ctccctccgtttcataatgtaggattttctagcactacccatatttatatagaagttaat 90
Query: 66 gaatctaaacatatatatttatcctagatccattaatat 104
||||||||||| |||||| | ||||||| |||||||||
Sbjct: 89 gaatctaaacacatatatat-gcctagattcattaatat 52
Score = 60.0 bits (30), Expect = 5e-10
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 10 ctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaatgaat 69
|||||||||||||||||| | |||||||||| |||||| |||| ||| |||||||||
Sbjct: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
Query: 70 ctaaacatatatat 83
||| |||||||||
Sbjct: 64 ctaggcatatatat 77
>45514_miR1132:micropc
Length = 149
Score = 69.9 bits (35), Expect = 6e-13
Identities = 84/99 (84%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 6 ctccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaat 65
|||||||||||||| |||||| | |||||||| | |||||||||||| || ||||||
Sbjct: 149 ctccctccgtttcataatgtaggattttctagcactacccatatttatatagaagttaat 90
Query: 66 gaatctaaacatatatatttatcctagatccattaatat 104
||||||||||| |||||| | ||||||| |||||||||
Sbjct: 89 gaatctaaacacatatatat-gcctagattcattaatat 52
Score = 60.0 bits (30), Expect = 5e-10
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 10 ctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaatgaat 69
|||||||||||||||||| | |||||||||| |||||| |||| ||| |||||||||
Sbjct: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
Query: 70 ctaaacatatatat 83
||| |||||||||
Sbjct: 64 ctaggcatatatat 77
>45099_miR1132:micropc
Length = 149
Score = 69.9 bits (35), Expect = 6e-13
Identities = 84/99 (84%), Gaps = 1/99 (1%)
Strand = Plus / Minus
Query: 6 ctccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaat 65
|||||||||||||| |||||| | |||||||| | |||||||||||| || ||||||
Sbjct: 149 ctccctccgtttcataatgtaggattttctagcactacccatatttatatagaagttaat 90
Query: 66 gaatctaaacatatatatttatcctagatccattaatat 104
||||||||||| |||||| | ||||||| |||||||||
Sbjct: 89 gaatctaaacacatatatat-gcctagattcattaatat 52
Score = 60.0 bits (30), Expect = 5e-10
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 10 ctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaatgaat 69
|||||||||||||||||| | |||||||||| |||||| |||| ||| |||||||||
Sbjct: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
Query: 70 ctaaacatatatat 83
||| |||||||||
Sbjct: 64 ctaggcatatatat 77
>45260_miR819:micropc
Length = 116
Score = 67.9 bits (34), Expect = 2e-12
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 32 ttctagcattttccatatttatattgatgttaatgaatctaaacatatat 81
|||||||||| |||||||| |||| ||||||||||||||||||||||||
Sbjct: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 43 tccatatttatattgatgttaatgaatctaaacatatatat 83
||||||||||||| ||||||||||||| || ||| ||||||
Sbjct: 95 tccatatttatatagatgttaatgaatatagacacatatat 55
>45075_miR819:micropc
Length = 116
Score = 67.9 bits (34), Expect = 2e-12
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 32 ttctagcattttccatatttatattgatgttaatgaatctaaacatatat 81
|||||||||| |||||||| |||| ||||||||||||||||||||||||
Sbjct: 11 ttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 43 tccatatttatattgatgttaatgaatctaaacatatatat 83
||||||||||||| ||||||||||||| || ||| ||||||
Sbjct: 95 tccatatttatatagatgttaatgaatatagacacatatat 55
>44978_miR1130:micropc
Length = 144
Score = 65.9 bits (33), Expect = 9e-12
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 9 cctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaatgaa 68
||||||||||| |||||||| | |||||||||| |||| |||||||| ||| |||||||
Sbjct: 1 cctccgtttcataatgtaagactttctagcattgtccacatttatatatatgctaatgaa 60
Query: 69 tctaa 73
|||||
Sbjct: 61 tctaa 65
Score = 50.1 bits (25), Expect = 5e-07
Identities = 61/73 (83%)
Strand = Plus / Minus
Query: 9 cctccgtttcacaatgtaagtcattctagcattttccatatttatattgatgttaatgaa 68
|||| |||||| |||||||| | |||||||||| | |||| |||| ||||| ||| ||
Sbjct: 144 cctctgtttcataatgtaagactttctagcattacctgtattcatatagatgtcaataaa 85
Query: 69 tctaaacatatat 81
|||||||||||||
Sbjct: 84 tctaaacatatat 72
>45522_miR809:micropc
Length = 100
Score = 61.9 bits (31), Expect = 1e-10
Identities = 62/71 (87%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 31 attctagcattttccatatttatattgatgttaatgaatctaaacatatatatttatcct 90
|||||||||||||||| ||| || ||||||||||||||||| |||||| ||| ||| ||
Sbjct: 1 attctagcattttccacattcgtaatgatgttaatgaatctagacatatgtatctat-ct 59
Query: 91 agatccattaa 101
|||| ||||||
Sbjct: 60 agattcattaa 70
>45913_miR809:micropc
Length = 100
Score = 60.0 bits (30), Expect = 5e-10
Identities = 52/58 (89%), Gaps = 1/58 (1%)
Strand = Plus / Minus
Query: 31 attctagcattttccatatttatattgatgttaatgaatctaaacatatatatttatc 88
|||||| ||||| ||| ||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 100 attctaacatttcccacattcatattgatgttaatgaatctaaa-atatatatctatc 44
>46775_miR808:micropc
Length = 98
Score = 58.0 bits (29), Expect = 2e-09
Identities = 51/57 (89%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 32 ttctagcattttccatatttatattgatgttaatgaatctaaacatatatatttatc 88
||||| ||||| ||| ||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 98 ttctaacatttcccacattcatattgatgttaatgaatctaaa-atatatatctatc 43
>45731_miR446:micropc
Length = 86
Score = 58.0 bits (29), Expect = 2e-09
Identities = 72/85 (84%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 38 cattttccatatttatattgatgttaatgaatctaaacatatatatttatcctagatcca 97
|||| |||| ||| |||| ||| ||||||||||||||||||||| | | | |||||| ||
Sbjct: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgt-ctagattca 59
Query: 98 ttaatattaatatgactgtgggcaa 122
|||| || ||||||| |||||||||
Sbjct: 60 ttaacatcaatatgaatgtgggcaa 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 52 atattgatgttaatgaatcta 72
|||||||||||||||||||||
Sbjct: 72 atattgatgttaatgaatcta 52
