miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46381_miR1884:micropc
          Length = 204

 Score =  168 bits (85), Expect = 1e-42
 Identities = 152/173 (87%), Gaps = 1/173 (0%)
 Strand = Plus / Plus

                                                                       
Query: 28  aatgtatgacgccattgactttttgtccaacgtttgatcattcgtcttattcaagaaatt 87
           ||||||| ||||| ||||||||||| | ||| ||| | ||||| ||||||| || |||||
Sbjct: 1   aatgtataacgccgttgactttttgactaacatttaaccattcatcttattaaaaaaatt 60

                                                                       
Query: 88  tatgtaattatcatttattttattatgacttgattcgttatcaagtattctttaagcatg 147
            ||||||||||||||||||||||||||| ||||||  | ||||| | ||||||||| |||
Sbjct: 61  -atgtaattatcatttattttattatgatttgatttatcatcaaatgttctttaagtatg 119

                                                                
Query: 148 atataaatatttttatatttgcacaaaaattttgaataaaacgaatggtcaaa 200
           |||||||||||||||||||||||  |||||||||||||| |||||||||||||
Sbjct: 120 atataaatatttttatatttgcatcaaaattttgaataagacgaatggtcaaa 172



 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 39/43 (90%), Gaps = 1/43 (2%)
 Strand = Plus / Minus

                                                      
Query: 39  ccattgactttttgtccaacgtttgatcattcgtcttattcaa 81
           ||||||||||||| || ||| ||||| ||||||||||||||||
Sbjct: 192 ccattgactttttatc-aacttttgaccattcgtcttattcaa 151




>46603_miR806:micropc
          Length = 188

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                  
Query: 59 gtttgatcattcgtcttattcaagaaatttatgtaattat 98
          |||||| | |||||||||||||| ||||||| ||||||||
Sbjct: 24 gtttgaccgttcgtcttattcaaaaaatttaagtaattat 63




>46529_miR806:micropc
          Length = 188

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                  
Query: 59 gtttgatcattcgtcttattcaagaaatttatgtaattat 98
          |||||| | |||||||||||||| ||||||| ||||||||
Sbjct: 24 gtttgaccgttcgtcttattcaaaaaatttaagtaattat 63




>45954_miR806:micropc
          Length = 188

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                  
Query: 59 gtttgatcattcgtcttattcaagaaatttatgtaattat 98
          |||||| | |||||||||||||| ||||||| ||||||||
Sbjct: 24 gtttgaccgttcgtcttattcaaaaaatttaagtaattat 63




>46748_miR806:micropc
          Length = 187

 Score = 40.1 bits (20), Expect = 8e-04
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 69  tcgtcttattcaagaaatttatgtaattatcatttatttt 108
           ||||||||||||| |||||||  ||||||| |||| ||||
Sbjct: 155 tcgtcttattcaaaaaatttaaataattattatttttttt 116