miRNEST 2.0, an integrative microRNA resource :: BLAST
>45825_miR818:micropc
Length = 130
Score = 52.0 bits (26), Expect = 2e-07
Identities = 56/65 (86%), Gaps = 2/65 (3%)
Strand = Plus / Minus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
||||||||| |||||||||||||||| || |||||| ||||||| |||||||||||
Sbjct: 63 ttaaataaggcgagtggtcaaacgttacaaacaaaaa--atcaaaattccttatattgtg 6
Query: 228 ggacg 232
|||||
Sbjct: 5 ggacg 1
Score = 52.0 bits (26), Expect = 2e-07
Identities = 56/65 (86%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 168 ttaaataagacgagtggtcaaacgttgtaagcaaaaactctcaaaatctcttatattgtg 227
|||||||||| ||||||||||||||| || |||||| || |||||| |||||||| ||
Sbjct: 68 ttaaataagatgagtggtcaaacgttacaaacaaaaa--cttaaaatcccttatattatg 125
Query: 228 ggacg 232
|||||
Sbjct: 126 ggacg 130
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 23 cgtcccataatataagagattttaagtttt 52
|||||||||||||||| |||||||||||||
Sbjct: 130 cgtcccataatataagggattttaagtttt 101
>46836_miR1439:micropc
Length = 86
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 215 ctcttatattgtgggacggagggagta 241
|||||||||| ||||||||||||||||
Sbjct: 59 ctcttatattttgggacggagggagta 85
>46744_miR1436:micropc
Length = 83
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagag 40
||||| ||||||||||||||||||||
Sbjct: 83 actccctccgtcccataatataagag 58
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 215 ctcttatattgtgggacggagggagt 240
|||||||||| |||||||||||||||
Sbjct: 58 ctcttatattatgggacggagggagt 83
>46560_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagag 40
||||| ||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagag 55
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 215 ctcttatattgtgggacggagggagt 240
|||||||||| |||||||||||||||
Sbjct: 55 ctcttatattatgggacggagggagt 80
>46416_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagag 40
||||| ||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagag 55
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 215 ctcttatattgtgggacggagggagt 240
|||||||||| |||||||||||||||
Sbjct: 55 ctcttatattatgggacggagggagt 80
>46351_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagag 40
||||| ||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagag 55
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 215 ctcttatattgtgggacggagggagt 240
|||||||||| |||||||||||||||
Sbjct: 55 ctcttatattatgggacggagggagt 80
>46296_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagag 40
||||| ||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagag 55
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 215 ctcttatattgtgggacggagggagt 240
|||||||||| |||||||||||||||
Sbjct: 55 ctcttatattatgggacggagggagt 80
>46229_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagag 40
||||| ||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagag 55
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 215 ctcttatattgtgggacggagggagt 240
|||||||||| |||||||||||||||
Sbjct: 55 ctcttatattatgggacggagggagt 80
>46082_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagag 40
||||| ||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagag 55
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 215 ctcttatattgtgggacggagggagt 240
|||||||||| |||||||||||||||
Sbjct: 55 ctcttatattatgggacggagggagt 80
>45853_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagag 40
||||| ||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagag 55
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 215 ctcttatattgtgggacggagggagt 240
|||||||||| |||||||||||||||
Sbjct: 55 ctcttatattatgggacggagggagt 80
>45812_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagag 40
||||| ||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagag 55
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 215 ctcttatattgtgggacggagggagt 240
|||||||||| |||||||||||||||
Sbjct: 55 ctcttatattatgggacggagggagt 80
>45616_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagag 40
||||| ||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagag 55
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 215 ctcttatattgtgggacggagggagt 240
|||||||||| |||||||||||||||
Sbjct: 55 ctcttatattatgggacggagggagt 80
>45608_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagag 40
||||| ||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagag 55
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 215 ctcttatattgtgggacggagggagt 240
|||||||||| |||||||||||||||
Sbjct: 55 ctcttatattatgggacggagggagt 80
>45459_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagag 40
||||| ||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagag 55
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 215 ctcttatattgtgggacggagggagt 240
|||||||||| |||||||||||||||
Sbjct: 55 ctcttatattatgggacggagggagt 80
>45450_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagag 40
||||| ||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagag 55
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 215 ctcttatattgtgggacggagggagt 240
|||||||||| |||||||||||||||
Sbjct: 55 ctcttatattatgggacggagggagt 80
>45382_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagag 40
||||| ||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagag 55
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 215 ctcttatattgtgggacggagggagt 240
|||||||||| |||||||||||||||
Sbjct: 55 ctcttatattatgggacggagggagt 80
>45149_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagag 40
||||| ||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagag 55
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 215 ctcttatattgtgggacggagggagt 240
|||||||||| |||||||||||||||
Sbjct: 55 ctcttatattatgggacggagggagt 80
>44955_miR1436:micropc
Length = 80
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataagag 40
||||| ||||||||||||||||||||
Sbjct: 80 actccctccgtcccataatataagag 55
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 215 ctcttatattgtgggacggagggagt 240
|||||||||| |||||||||||||||
Sbjct: 55 ctcttatattatgggacggagggagt 80
>44863_miR1132:micropc
Length = 140
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 25 tcccataatataagagatttt 45
|||||||||||||||||||||
Sbjct: 6 tcccataatataagagatttt 26
>46683_miR1436:micropc
Length = 60
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 15 actccatccgtcccataatataag 38
||||| ||||||||||||||||||
Sbjct: 60 actccctccgtcccataatataag 37
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 217 cttatattgtgggacggagggagt 240
|||||||| |||||||||||||||
Sbjct: 37 cttatattatgggacggagggagt 60
