miRNEST 2.0, an integrative microRNA resource :: BLAST
>45260_miR819:micropc
Length = 116
Score = 180 bits (91), Expect = 2e-46
Identities = 114/118 (96%), Gaps = 3/118 (2%)
Strand = Plus / Plus
Query: 29 ttataagactttctagcattatcacatattcatatatat-ttaatgaatctaaacatata 87
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 1 ttataagactttctagcattatc-catattcatatatatgttaatgaatctaaacatata 59
Query: 88 tgtgtctatattcattaacatctatataaatatggacacatactagaaagtcttataa 145
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 60 tgtgtctatattcattaacatctatataaatatggac-natactagaaagtcttataa 116
Score = 69.9 bits (35), Expect = 6e-13
Identities = 100/118 (84%), Gaps = 3/118 (2%)
Strand = Plus / Minus
Query: 29 ttataagactttctagcattatcacatattcatatatat-ttaatgaatctaaacatata 87
|||||||||||||||| || || |||||| ||||| || ||||||||| || ||| |||
Sbjct: 116 ttataagactttctagtatngtc-catatttatatagatgttaatgaatatagacacata 58
Query: 88 tgtgtctatattcattaacatctatataaatatggacacatactagaaagtcttataa 145
| ||| || |||||||||||| ||||| |||||||| | || ||||||||||||||||
Sbjct: 57 tatgtttagattcattaacatatatatgaatatggata-atgctagaaagtcttataa 1
>45075_miR819:micropc
Length = 116
Score = 180 bits (91), Expect = 2e-46
Identities = 114/118 (96%), Gaps = 3/118 (2%)
Strand = Plus / Plus
Query: 29 ttataagactttctagcattatcacatattcatatatat-ttaatgaatctaaacatata 87
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 1 ttataagactttctagcattatc-catattcatatatatgttaatgaatctaaacatata 59
Query: 88 tgtgtctatattcattaacatctatataaatatggacacatactagaaagtcttataa 145
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 60 tgtgtctatattcattaacatctatataaatatggac-natactagaaagtcttataa 116
Score = 69.9 bits (35), Expect = 6e-13
Identities = 100/118 (84%), Gaps = 3/118 (2%)
Strand = Plus / Minus
Query: 29 ttataagactttctagcattatcacatattcatatatat-ttaatgaatctaaacatata 87
|||||||||||||||| || || |||||| ||||| || ||||||||| || ||| |||
Sbjct: 116 ttataagactttctagtatngtc-catatttatatagatgttaatgaatatagacacata 58
Query: 88 tgtgtctatattcattaacatctatataaatatggacacatactagaaagtcttataa 145
| ||| || |||||||||||| ||||| |||||||| | || ||||||||||||||||
Sbjct: 57 tatgtttagattcattaacatatatatgaatatggata-atgctagaaagtcttataa 1
>46464_miR1132:micropc
Length = 149
Score = 69.9 bits (35), Expect = 6e-13
Identities = 79/90 (87%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 36 actttctagcattatcacatattcatatatat-ttaatgaatctaaacatatat--gtgt 92
||||||||||||| |||||||||||||| || |||||||||||| ||||||| ||||
Sbjct: 23 actttctagcattg-cacatattcatatagatattaatgaatctaggcatatatatgtgt 81
Query: 93 ctatattcattaacatctatataaatatgg 122
|| |||||||||| |||||||||||||||
Sbjct: 82 ttagattcattaacttctatataaatatgg 111
Score = 50.1 bits (25), Expect = 6e-07
Identities = 49/56 (87%), Gaps = 2/56 (3%)
Strand = Plus / Minus
Query: 68 ttaatgaatctaa--acatatatgtgtctatattcattaacatctatataaatatg 121
||||||||||||| |||||||| || ||| ||||||||| |||||||| ||||||
Sbjct: 94 ttaatgaatctaaacacatatatatgcctagattcattaatatctatatgaatatg 39
>45514_miR1132:micropc
Length = 149
Score = 69.9 bits (35), Expect = 6e-13
Identities = 79/90 (87%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 36 actttctagcattatcacatattcatatatat-ttaatgaatctaaacatatat--gtgt 92
||||||||||||| |||||||||||||| || |||||||||||| ||||||| ||||
Sbjct: 23 actttctagcattg-cacatattcatatagatattaatgaatctaggcatatatatgtgt 81
Query: 93 ctatattcattaacatctatataaatatgg 122
|| |||||||||| |||||||||||||||
Sbjct: 82 ttagattcattaacttctatataaatatgg 111
Score = 50.1 bits (25), Expect = 6e-07
Identities = 49/56 (87%), Gaps = 2/56 (3%)
Strand = Plus / Minus
Query: 68 ttaatgaatctaa--acatatatgtgtctatattcattaacatctatataaatatg 121
||||||||||||| |||||||| || ||| ||||||||| |||||||| ||||||
Sbjct: 94 ttaatgaatctaaacacatatatatgcctagattcattaatatctatatgaatatg 39
>45099_miR1132:micropc
Length = 149
Score = 69.9 bits (35), Expect = 6e-13
Identities = 79/90 (87%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 36 actttctagcattatcacatattcatatatat-ttaatgaatctaaacatatat--gtgt 92
||||||||||||| |||||||||||||| || |||||||||||| ||||||| ||||
Sbjct: 23 actttctagcattg-cacatattcatatagatattaatgaatctaggcatatatatgtgt 81
Query: 93 ctatattcattaacatctatataaatatgg 122
|| |||||||||| |||||||||||||||
Sbjct: 82 ttagattcattaacttctatataaatatgg 111
Score = 50.1 bits (25), Expect = 6e-07
Identities = 49/56 (87%), Gaps = 2/56 (3%)
Strand = Plus / Minus
Query: 68 ttaatgaatctaa--acatatatgtgtctatattcattaacatctatataaatatg 121
||||||||||||| |||||||| || ||| ||||||||| |||||||| ||||||
Sbjct: 94 ttaatgaatctaaacacatatatatgcctagattcattaatatctatatgaatatg 39
>45731_miR446:micropc
Length = 86
Score = 61.9 bits (31), Expect = 1e-10
Identities = 46/50 (92%), Gaps = 2/50 (4%)
Strand = Plus / Plus
Query: 67 tttaatgaatctaaacatata--tgtgtctatattcattaacatctatat 114
||||||||||||||||||||| |||||||| ||||||||||||| ||||
Sbjct: 23 tttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatat 72
>44978_miR1130:micropc
Length = 144
Score = 61.9 bits (31), Expect = 1e-10
Identities = 97/114 (85%), Gaps = 5/114 (4%)
Strand = Plus / Minus
Query: 32 taagactttctagcattatcacatattcatatatattt-aatgaatctaaacatatatgt 90
|||||||||||||||||| | |||||||||| || | ||| |||||||||||||||||
Sbjct: 128 taagactttctagcattacctg-tattcatatagatgtcaataaatctaaacatatatgt 70
Query: 91 gt--ctatattcattaacatctatataaatatggacacatactagaaagtctta 142
|| || |||||||| ||| ||||||||| |||||| || |||||||||||||
Sbjct: 69 gtgcttagattcattagcatatatataaatgtggaca-atgctagaaagtctta 17
Score = 48.1 bits (24), Expect = 2e-06
Identities = 89/107 (83%), Gaps = 4/107 (3%)
Strand = Plus / Plus
Query: 16 cctccgtatcatattataagactttctagcattatcacatattcatatatat-ttaatga 74
||||||| ||||| | ||||||||||||||||| || || ||| |||||||| ||||||
Sbjct: 1 cctccgtttcataatgtaagactttctagcattgtc-cacatttatatatatgctaatga 59
Query: 75 atctaa--acatatatgtgtctatattcattaacatctatataaata 119
|||||| ||| |||| ||| || ||| ||| |||||||||| ||||
Sbjct: 60 atctaagcacacatatatgtttagatttattgacatctatatgaata 106
>45687_miR819:micropc
Length = 84
Score = 52.0 bits (26), Expect = 1e-07
Identities = 49/54 (90%), Gaps = 2/54 (3%)
Strand = Plus / Minus
Query: 24 tcatattataagactttctagcattatcacatattcatatatat-ttaatgaat 76
||||||||||||||||||||||||| | || |||||||||||| |||||||||
Sbjct: 84 tcatattataagactttctagcatt-gcccacattcatatatatgttaatgaat 32
Score = 44.1 bits (22), Expect = 3e-05
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Plus
Query: 97 attcattaacatctatataaatatggacacatactagaaagtcttataat 146
|||||||||||| ||||| ||| ||| || || |||||||||||||||||
Sbjct: 32 attcattaacatatatatgaatgtgggca-atgctagaaagtcttataat 80
>46670_miR809:micropc
Length = 97
Score = 50.1 bits (25), Expect = 6e-07
Identities = 53/60 (88%), Gaps = 3/60 (5%)
Strand = Plus / Minus
Query: 56 attcatatatat-ttaatgaatctaaacatatatgtgt--ctatattcattaacatctat 112
|||||||||||| ||||||||| || |||||||||||| ||| ||| ||||||||||||
Sbjct: 81 attcatatatatgttaatgaatgtagacatatatgtgtgtctagatttattaacatctat 22
>44980_miR808:micropc
Length = 97
Score = 50.1 bits (25), Expect = 6e-07
Identities = 53/60 (88%), Gaps = 3/60 (5%)
Strand = Plus / Minus
Query: 56 attcatatatat-ttaatgaatctaaacatatatgtgt--ctatattcattaacatctat 112
|||||||||||| ||||||||| || |||||||||||| ||| ||| ||||||||||||
Sbjct: 81 attcatatatatgttaatgaatgtagacatatatgtgtgtctagatttattaacatctat 22
>46336_miR809:micropc
Length = 98
Score = 48.1 bits (24), Expect = 2e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 56 attcatatatat-ttaatgaatctaaacatatatgtgtctatattcattaacatctatat 114
|||||||| ||| |||||||||||| |||||||| | | || |||||| || ||| ||||
Sbjct: 81 attcatatttatattaatgaatctagacatatatctatttaaattcatcaatatcaatat 22
Query: 115 aaatatgg 122
||||||||
Sbjct: 21 aaatatgg 14
>45839_miR809:micropc
Length = 98
Score = 48.1 bits (24), Expect = 2e-06
Identities = 58/68 (85%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 56 attcatatatat-ttaatgaatctaaacatatatgtgtctatattcattaacatctatat 114
|||||||| ||| |||||||||||| |||||||| | | || |||||| || ||| ||||
Sbjct: 81 attcatatttatattaatgaatctagacatatatctatttaaattcatcaatatcaatat 22
Query: 115 aaatatgg 122
||||||||
Sbjct: 21 aaatatgg 14
>46637_miR446:micropc
Length = 80
Score = 44.1 bits (22), Expect = 3e-05
Identities = 49/57 (85%), Gaps = 2/57 (3%)
Strand = Plus / Plus
Query: 68 ttaatgaatctaaacatatatgtgt--ctatattcattaacatctatataaatatgg 122
|||||||||||| |||||||| | | ||| ||||||||||||| |||| |||||||
Sbjct: 20 ttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatgg 76
>45215_miR1120:micropc
Length = 142
Score = 44.1 bits (22), Expect = 3e-05
Identities = 43/49 (87%), Gaps = 2/49 (4%)
Strand = Plus / Plus
Query: 68 ttaatgaatctaaacatat--atgtgtctatattcattaacatctatat 114
|||||||||||| | |||| |||||| || ||||||||||||||||||
Sbjct: 52 ttaatgaatctagatatatttatgtgtttaaattcattaacatctatat 100
>44937_miR819:micropc
Length = 94
Score = 44.1 bits (22), Expect = 3e-05
Identities = 61/72 (84%), Gaps = 4/72 (5%)
Strand = Plus / Minus
Query: 24 tcatattataagactttctagcattatcacatattcatatatat---ttaatgaatctaa 80
|||||||||||||||||||| ||| | |||||| |||||||| ||||||| ||||
Sbjct: 94 tcatattataagactttctattatt-gcccatatttatatatatatgttaatgagtctat 36
Query: 81 acatatatgtgt 92
||||||||||||
Sbjct: 35 acatatatgtgt 24
Score = 42.1 bits (21), Expect = 1e-04
Identities = 34/37 (91%), Gaps = 1/37 (2%)
Strand = Plus / Plus
Query: 110 tatataaatatggacacatactagaaagtcttataat 146
||||||||||||| || ||| ||||||||||||||||
Sbjct: 55 tatataaatatgggca-ataatagaaagtcttataat 90
>46801_miR809:micropc
Length = 110
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 68 ttaatgaatctaaacatatat 88
|||||||||||||||||||||
Sbjct: 70 ttaatgaatctaaacatatat 50
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 83 atatatgtgtctatattcattaacatctatataaat 118
|||||| ||| || ||||||||||||| ||||||||
Sbjct: 48 atatatatgtttagattcattaacatcaatataaat 83
>46060_miR809:micropc
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 91 gtctatattcattaacatctatataaatatgga 123
||||| ||||||||||||| |||| ||||||||
Sbjct: 45 gtctagattcattaacatcaatatgaatatgga 13
>46080_miR809:micropc
Length = 99
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 83 atatatgtgtctatattcattaacatctatat 114
|||||| ||||||||||||||| |||| ||||
Sbjct: 47 atatatatgtctatattcattaccatcaatat 78
>45707_miR809:micropc
Length = 99
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 83 atatatgtgtctatattcattaacatctatat 114
|||||| ||||||||||||||| |||| ||||
Sbjct: 47 atatatatgtctatattcattaccatcaatat 78
>45603_miR819:micropc
Length = 61
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 29 ttataagactttctagcatt 48
||||||||||||||||||||
Sbjct: 6 ttataagactttctagcatt 25
