miRNEST 2.0, an integrative microRNA resource :: BLAST
>45260_miR819:micropc
Length = 116
Score = 224 bits (113), Expect = 2e-59
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 29 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
Query: 89 gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
Score = 107 bits (54), Expect = 3e-24
Identities = 100/116 (86%)
Strand = Plus / Minus
Query: 29 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 88
|||||||||||||||| || |||||||| ||||| |||||||||||| || ||| ||||
Sbjct: 116 ttataagactttctagtatngtccatatttatatagatgttaatgaatatagacacatat 57
Query: 89 gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 144
||| || |||||||||||| ||||| |||||||| || ||||||||||||||||
Sbjct: 56 atgtttagattcattaacatatatatgaatatggataatgctagaaagtcttataa 1
>45075_miR819:micropc
Length = 116
Score = 224 bits (113), Expect = 2e-59
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 29 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60
Query: 89 gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
Score = 107 bits (54), Expect = 3e-24
Identities = 100/116 (86%)
Strand = Plus / Minus
Query: 29 ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 88
|||||||||||||||| || |||||||| ||||| |||||||||||| || ||| ||||
Sbjct: 116 ttataagactttctagtatngtccatatttatatagatgttaatgaatatagacacatat 57
Query: 89 gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 144
||| || |||||||||||| ||||| |||||||| || ||||||||||||||||
Sbjct: 56 atgtttagattcattaacatatatatgaatatggataatgctagaaagtcttataa 1
>44978_miR1130:micropc
Length = 144
Score = 107 bits (54), Expect = 3e-24
Identities = 110/128 (85%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 32 taagactttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtg 91
|||||||||||||||||| | |||||||||| |||| ||| ||||||||||||||||||
Sbjct: 128 taagactttctagcattacctgtattcatatagatgtcaataaatctaaacatatatgtg 69
Query: 92 t--ctatattcattaacatctatataaatatggacnatactagaaagtcttataatctga 149
| || |||||||| ||| ||||||||| ||||| || ||||||||||||| | | |||
Sbjct: 68 tgcttagattcattagcatatatataaatgtggacaatgctagaaagtcttacattatga 9
Query: 150 aacggagg 157
||||||||
Sbjct: 8 aacggagg 1
Score = 77.8 bits (39), Expect = 2e-15
Identities = 90/106 (84%), Gaps = 2/106 (1%)
Strand = Plus / Plus
Query: 16 cctccgtatcatattataagactttctagcattatccatattcatatatatgttaatgaa 75
||||||| ||||| | ||||||||||||||||| |||| ||| ||||||||| |||||||
Sbjct: 1 cctccgtttcataatgtaagactttctagcattgtccacatttatatatatgctaatgaa 60
Query: 76 tctaa--acatatatgtgtctatattcattaacatctatataaata 119
||||| ||| |||| ||| || ||| ||| |||||||||| ||||
Sbjct: 61 tctaagcacacatatatgtttagatttattgacatctatatgaata 106
>46464_miR1132:micropc
Length = 149
Score = 81.8 bits (41), Expect = 2e-16
Identities = 118/143 (82%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 16 cctccgtatcatattataagactttctagcattatccatattcatatatatgttaatgaa 75
||||||| ||||| | || || ||||||||| || ||||||| ||||| | |||||||||
Sbjct: 146 cctccgtttcataatgtaggattttctagcactacccatatttatatagaagttaatgaa 87
Query: 76 tctaa--acatatatgtgtctatattcattaacatctatataaatatggacnatactaga 133
||||| |||||||| || ||| ||||||||| |||||||| |||||| | || |||||
Sbjct: 86 tctaaacacatatatatgcctagattcattaatatctatatgaatatgtgcaatgctaga 27
Query: 134 aagtcttataatctgaaacggag 156
|||| ||| | | ||||||||||
Sbjct: 26 aagtattacattgtgaaacggag 4
Score = 75.8 bits (38), Expect = 1e-14
Identities = 77/89 (86%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 36 actttctagcattatccatattcatatatatgttaatgaatctaaacatatat--gtgtc 93
||||||||||||| |||||||||||| || |||||||||||| ||||||| ||||
Sbjct: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
Query: 94 tatattcattaacatctatataaatatgg 122
|| |||||||||| |||||||||||||||
Sbjct: 83 tagattcattaacttctatataaatatgg 111
>45687_miR819:micropc
Length = 84
Score = 81.8 bits (41), Expect = 2e-16
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 24 tcatattataagactttctagcattatccatattcatatatatgttaatgaat 76
||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 84 tcatattataagactttctagcattgcccacattcatatatatgttaatgaat 32
Score = 52.0 bits (26), Expect = 1e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 97 attcattaacatctatataaatatggacnatactagaaagtcttataat 145
|||||||||||| ||||| ||| ||| | || |||||||||||||||||
Sbjct: 32 attcattaacatatatatgaatgtgggcaatgctagaaagtcttataat 80
>45514_miR1132:micropc
Length = 149
Score = 81.8 bits (41), Expect = 2e-16
Identities = 118/143 (82%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 16 cctccgtatcatattataagactttctagcattatccatattcatatatatgttaatgaa 75
||||||| ||||| | || || ||||||||| || ||||||| ||||| | |||||||||
Sbjct: 146 cctccgtttcataatgtaggattttctagcactacccatatttatatagaagttaatgaa 87
Query: 76 tctaa--acatatatgtgtctatattcattaacatctatataaatatggacnatactaga 133
||||| |||||||| || ||| ||||||||| |||||||| |||||| | || |||||
Sbjct: 86 tctaaacacatatatatgcctagattcattaatatctatatgaatatgtgcaatgctaga 27
Query: 134 aagtcttataatctgaaacggag 156
|||| ||| | | ||||||||||
Sbjct: 26 aagtattacattgtgaaacggag 4
Score = 75.8 bits (38), Expect = 1e-14
Identities = 77/89 (86%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 36 actttctagcattatccatattcatatatatgttaatgaatctaaacatatat--gtgtc 93
||||||||||||| |||||||||||| || |||||||||||| ||||||| ||||
Sbjct: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
Query: 94 tatattcattaacatctatataaatatgg 122
|| |||||||||| |||||||||||||||
Sbjct: 83 tagattcattaacttctatataaatatgg 111
>45099_miR1132:micropc
Length = 149
Score = 81.8 bits (41), Expect = 2e-16
Identities = 118/143 (82%), Gaps = 2/143 (1%)
Strand = Plus / Minus
Query: 16 cctccgtatcatattataagactttctagcattatccatattcatatatatgttaatgaa 75
||||||| ||||| | || || ||||||||| || ||||||| ||||| | |||||||||
Sbjct: 146 cctccgtttcataatgtaggattttctagcactacccatatttatatagaagttaatgaa 87
Query: 76 tctaa--acatatatgtgtctatattcattaacatctatataaatatggacnatactaga 133
||||| |||||||| || ||| ||||||||| |||||||| |||||| | || |||||
Sbjct: 86 tctaaacacatatatatgcctagattcattaatatctatatgaatatgtgcaatgctaga 27
Query: 134 aagtcttataatctgaaacggag 156
|||| ||| | | ||||||||||
Sbjct: 26 aagtattacattgtgaaacggag 4
Score = 75.8 bits (38), Expect = 1e-14
Identities = 77/89 (86%), Gaps = 2/89 (2%)
Strand = Plus / Plus
Query: 36 actttctagcattatccatattcatatatatgttaatgaatctaaacatatat--gtgtc 93
||||||||||||| |||||||||||| || |||||||||||| ||||||| ||||
Sbjct: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
Query: 94 tatattcattaacatctatataaatatgg 122
|| |||||||||| |||||||||||||||
Sbjct: 83 tagattcattaacttctatataaatatgg 111
>46670_miR809:micropc
Length = 97
Score = 73.8 bits (37), Expect = 4e-14
Identities = 67/76 (88%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaacatatat--gtgtctat 96
||||| ||||| ||| |||||||||||||||||||||| || |||||||| |||||||
Sbjct: 97 ttctaacattacccacattcatatatatgttaatgaatgtagacatatatgtgtgtctag 38
Query: 97 attcattaacatctat 112
||| ||||||||||||
Sbjct: 37 atttattaacatctat 22
Score = 40.1 bits (20), Expect = 5e-04
Identities = 63/75 (84%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 42 tagcattatccatattcatatatatgttaatgaatctaaacata--tatgtgtctatatt 99
||||||| || ||||||| ||| |||||||| |||||| ||| | ||| |||||| |||
Sbjct: 4 tagcattgtctatattca-atagatgttaataaatctagacacacatatatgtctacatt 62
Query: 100 cattaacatctatat 114
||||||||| |||||
Sbjct: 63 cattaacatatatat 77
>45731_miR446:micropc
Length = 86
Score = 73.8 bits (37), Expect = 4e-14
Identities = 64/72 (88%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 45 cattatccatattcatatatatgttaatgaatctaaacatata--tgtgtctatattcat 102
|||| |||| ||||||||| || |||||||||||||||||||| |||||||| ||||||
Sbjct: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
Query: 103 taacatctatat 114
||||||| ||||
Sbjct: 61 taacatcaatat 72
Score = 42.1 bits (21), Expect = 1e-04
Identities = 60/72 (83%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 55 attcatatatatgttaatgaatct--aaacatatatgtgtctatattcattaacatctat 112
|||||||| |||||||||||||| | ||| |||| ||| || ||||||||| ||||||
Sbjct: 76 attcatattgatgttaatgaatctagacacacatatatgtttagattcattaaaatctat 17
Query: 113 ataaatatggac 124
|| ||| |||||
Sbjct: 16 atgaatgtggac 5
>45215_miR1120:micropc
Length = 142
Score = 73.8 bits (37), Expect = 4e-14
Identities = 102/123 (82%), Gaps = 2/123 (1%)
Strand = Plus / Plus
Query: 36 actttctagcattatccatattcatatatatgttaatgaatctaaacata--tatgtgtc 93
||||||||||||| ||| ||||| |||||||||||||||||| | ||| |||||||
Sbjct: 20 actttctagcattgcccacgttcatttatatgttaatgaatctagatatatttatgtgtt 79
Query: 94 tatattcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacg 153
|| |||||||||||||||||| ||||| | || |||||| ||||||| | |||||||
Sbjct: 80 taaattcattaacatctatatgtatatgagcaatgttagaaattcttatattatgaaacg 139
Query: 154 gag 156
|||
Sbjct: 140 gag 142
Score = 54.0 bits (27), Expect = 4e-08
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 17 ctccgtatcatattataagactttctagcattatccatattcatatatatgttaatgaat 76
|||||| ||||| ||||||| |||||| |||| ||||| |||||| ||||||||||||
Sbjct: 142 ctccgtttcataatataagaatttctaacattgctcatatacatatagatgttaatgaat 83
Query: 77 ctaaaca 83
||||||
Sbjct: 82 ttaaaca 76
>44980_miR808:micropc
Length = 97
Score = 73.8 bits (37), Expect = 4e-14
Identities = 67/76 (88%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaacatatat--gtgtctat 96
||||| ||||| ||| |||||||||||||||||||||| || |||||||| |||||||
Sbjct: 97 ttctaacattacccacattcatatatatgttaatgaatgtagacatatatgtgtgtctag 38
Query: 97 attcattaacatctat 112
||| ||||||||||||
Sbjct: 37 atttattaacatctat 22
Score = 40.1 bits (20), Expect = 5e-04
Identities = 63/75 (84%), Gaps = 3/75 (4%)
Strand = Plus / Plus
Query: 42 tagcattatccatattcatatatatgttaatgaatctaaacata--tatgtgtctatatt 99
||||||| || ||||||| ||| |||||||| |||||| ||| | ||| |||||| |||
Sbjct: 4 tagcattgtctatattca-atagatgttaataaatctagacacacatatatgtctacatt 62
Query: 100 cattaacatctatat 114
||||||||| |||||
Sbjct: 63 cattaacatatatat 77
>46336_miR809:micropc
Length = 98
Score = 65.9 bits (33), Expect = 9e-12
Identities = 80/96 (83%)
Strand = Plus / Minus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatat 98
|||||||||| | || |||||||| ||| |||||||||||| |||||||| | | || ||
Sbjct: 97 ttctagcatttttcacattcatatttatattaatgaatctagacatatatctatttaaat 38
Query: 99 tcattaacatctatataaatatggacnatactagaa 134
|||| || ||| |||||||||||| |||||||||
Sbjct: 37 tcatcaatatcaatataaatatggtgaatactagaa 2
>45839_miR809:micropc
Length = 98
Score = 65.9 bits (33), Expect = 9e-12
Identities = 80/96 (83%)
Strand = Plus / Minus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatat 98
|||||||||| | || |||||||| ||| |||||||||||| |||||||| | | || ||
Sbjct: 97 ttctagcatttttcacattcatatttatattaatgaatctagacatatatctatttaaat 38
Query: 99 tcattaacatctatataaatatggacnatactagaa 134
|||| || ||| |||||||||||| |||||||||
Sbjct: 37 tcatcaatatcaatataaatatggtgaatactagaa 2
>44937_miR819:micropc
Length = 94
Score = 63.9 bits (32), Expect = 4e-11
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 24 tcatattataagactttctagcattatccatattcatatatat--gttaatgaatctaaa 81
|||||||||||||||||||| ||| ||||||| |||||||| |||||||| |||| |
Sbjct: 94 tcatattataagactttctattattgcccatatttatatatatatgttaatgagtctata 35
Query: 82 catatatgtgt 92
|||||||||||
Sbjct: 34 catatatgtgt 24
Score = 50.1 bits (25), Expect = 5e-07
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 110 tatataaatatggacnatactagaaagtcttataat 145
||||||||||||| | ||| ||||||||||||||||
Sbjct: 55 tatataaatatgggcaataatagaaagtcttataat 90
>46060_miR809:micropc
Length = 87
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatcta 79
|||||||||| ||||||||||||| |||||||||||||||
Sbjct: 2 ttctagcattttccatattcatattgatgttaatgaatcta 42
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 91 gtctatattcattaacatctatataaatatgga 123
||||| ||||||||||||| |||| ||||||||
Sbjct: 45 gtctagattcattaacatcaatatgaatatgga 13
>46637_miR446:micropc
Length = 80
Score = 52.0 bits (26), Expect = 1e-07
Identities = 59/69 (85%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 56 ttcatatatatgttaatgaatctaaacatatatgtgt--ctatattcattaacatctata 113
||||||| ||||||||||||||| |||||||| | | ||| ||||||||||||| |||
Sbjct: 8 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 67
Query: 114 taaatatgg 122
| |||||||
Sbjct: 68 tgaatatgg 76
Score = 50.1 bits (25), Expect = 5e-07
Identities = 52/60 (86%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 51 ccatattcatatatatgttaatgaatcta--aacatatatgtgtctatattcattaacat 108
|||||||||||| ||||||||||||||| | |||||| |||||| ||||||||||||
Sbjct: 76 ccatattcatattgatgttaatgaatctagctagatatatatgtctagattcattaacat 17
>46801_miR809:micropc
Length = 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 65 atgttaatgaatctaaacatatat 88
||||||||||||||||||||||||
Sbjct: 73 atgttaatgaatctaaacatatat 50
Score = 46.1 bits (23), Expect = 9e-06
Identities = 56/66 (84%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 55 attcatatatatgttaatgaatctaaaca--tatatgtgtctatattcattaacatctat 112
|||||||| ||||||||||||||| | | ||||| ||| || ||||||||||||| ||
Sbjct: 18 attcatattaatgttaatgaatctagatagatatatatgtttagattcattaacatcaat 77
Query: 113 ataaat 118
||||||
Sbjct: 78 ataaat 83
>45708_miR809:micropc
Length = 100
Score = 46.1 bits (23), Expect = 9e-06
Identities = 68/82 (82%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 39 ttctagcattatccatattcatatatatgttaatgaatct--aaacatatatgtgtctat 96
||||| |||| | ||||||||||| || ||||||||||| | | |||||| ||||||
Sbjct: 2 ttctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtctag 61
Query: 97 attcattaacatctatataaat 118
|||||||| |||| ||||||||
Sbjct: 62 attcattagcatcaatataaat 83
