miRNEST 2.0, an integrative microRNA resource :: BLAST
>44978_miR1130:micropc
Length = 144
Score = 85.7 bits (43), Expect = 7e-18
Identities = 64/70 (91%), Gaps = 2/70 (2%)
Strand = Plus / Plus
Query: 12 taagactttatagcattgtccacattcatatagatgctaatgaatctagg--cacatata 69
||||||||| |||||||||||||||| ||||| ||||||||||||||| | ||||||||
Sbjct: 17 taagactttctagcattgtccacatttatatatatgctaatgaatctaagcacacatata 76
Query: 70 tgtttagatt 79
||||||||||
Sbjct: 77 tgtttagatt 86
>45260_miR819:micropc
Length = 116
Score = 83.8 bits (42), Expect = 3e-17
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatata 69
||||||||||| ||| || ||||| ||| ||||||||| |||||||| ||| ||||||||
Sbjct: 115 tataagactttctagtatngtccatatttatatagatgttaatgaatatagacacatata 56
Query: 70 tgtttagattcat 82
|||||||||||||
Sbjct: 55 tgtttagattcat 43
Score = 60.0 bits (30), Expect = 4e-10
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatcta 59
||||||||||| ||||||| |||| ||||||||| ||| |||||||||||
Sbjct: 2 tataagactttctagcattatccatattcatatatatgttaatgaatcta 51
>45075_miR819:micropc
Length = 116
Score = 83.8 bits (42), Expect = 3e-17
Identities = 65/73 (89%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatctaggcacatata 69
||||||||||| ||| || ||||| ||| ||||||||| |||||||| ||| ||||||||
Sbjct: 115 tataagactttctagtatngtccatatttatatagatgttaatgaatatagacacatata 56
Query: 70 tgtttagattcat 82
|||||||||||||
Sbjct: 55 tgtttagattcat 43
Score = 60.0 bits (30), Expect = 4e-10
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaatcta 59
||||||||||| ||||||| |||| ||||||||| ||| |||||||||||
Sbjct: 2 tataagactttctagcattatccatattcatatatatgttaatgaatcta 51
>45731_miR446:micropc
Length = 86
Score = 65.9 bits (33), Expect = 6e-12
Identities = 54/60 (90%), Gaps = 2/60 (3%)
Strand = Plus / Minus
Query: 25 cattgtccacattcatatagatgctaatgaatctag--gcacatatatgtttagattcat 82
||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||
Sbjct: 86 cattgcccacattcatattgatgttaatgaatctagacacacatatatgtttagattcat 27
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 25 cattgtccacattcatatagatgctaatgaatcta 59
|||||||||||||||||||||| |||||||||||
Sbjct: 1 cattgtccacattcatatagattttaatgaatcta 35
>45687_miR819:micropc
Length = 84
Score = 61.9 bits (31), Expect = 9e-11
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 10 tataagactttatagcattgtccacattcatatagatgctaatgaat 56
||||||||||| |||||||| ||||||||||||| ||| ||||||||
Sbjct: 78 tataagactttctagcattgcccacattcatatatatgttaatgaat 32
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 84 tgggtaatgctagaaagtcttatgatatga 113
|||| |||||||||||||||||| ||||||
Sbjct: 55 tgggcaatgctagaaagtcttataatatga 84
>46464_miR1132:micropc
Length = 149
Score = 60.0 bits (30), Expect = 4e-10
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 16 actttatagcattgtccacattcatatagatgctaatgaatctaggcacatata--tgtt 73
||||| |||||||| || |||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
Query: 74 tagattcat 82
|||||||||
Sbjct: 83 tagattcat 91
>45514_miR1132:micropc
Length = 149
Score = 60.0 bits (30), Expect = 4e-10
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 16 actttatagcattgtccacattcatatagatgctaatgaatctaggcacatata--tgtt 73
||||| |||||||| || |||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
Query: 74 tagattcat 82
|||||||||
Sbjct: 83 tagattcat 91
>45099_miR1132:micropc
Length = 149
Score = 60.0 bits (30), Expect = 4e-10
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 16 actttatagcattgtccacattcatatagatgctaatgaatctaggcacatata--tgtt 73
||||| |||||||| || |||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 23 actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82
Query: 74 tagattcat 82
|||||||||
Sbjct: 83 tagattcat 91
>45603_miR819:micropc
Length = 61
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 4 tcaggctataagactttatagcattgtccacattcatat 42
||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 1 tcaggttataagactttctagcattgcccacattcatat 39
>46060_miR809:micropc
Length = 87
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 22 tagcattgtccacattcatatagatgctaatgaatctag 60
||||||| |||| |||||||| |||| ||||||||||||
Sbjct: 5 tagcattttccatattcatattgatgttaatgaatctag 43
>45708_miR809:micropc
Length = 100
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 32 cacattcatatagatgctaatgaatctaggcacatatat 70
|||||| |||| ||||||||||||||||| || ||||||
Sbjct: 86 cacatttatattgatgctaatgaatctagacatatatat 48
>46775_miR808:micropc
Length = 98
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 31 ccacattcatatagatgctaatgaatcta 59
|||||||||||| |||| |||||||||||
Sbjct: 86 ccacattcatattgatgttaatgaatcta 58
>45995_miR446:micropc
Length = 86
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 31 ccacattcatatagatgctaatgaatcta 59
|||||||||||| |||| |||||||||||
Sbjct: 80 ccacattcatattgatgttaatgaatcta 52
>45913_miR809:micropc
Length = 100
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 31 ccacattcatatagatgctaatgaatcta 59
|||||||||||| |||| |||||||||||
Sbjct: 87 ccacattcatattgatgttaatgaatcta 59
>45717_miR446:micropc
Length = 86
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 31 ccacattcatatagatgctaatgaatcta 59
|||||||||||| |||| |||||||||||
Sbjct: 80 ccacattcatattgatgttaatgaatcta 52
>45215_miR1120:micropc
Length = 142
Score = 42.1 bits (21), Expect = 9e-05
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 16 actttatagcattgtccacattcatatagatgctaatgaatctag 60
||||| |||||||| |||| ||||| || ||| ||||||||||||
Sbjct: 20 actttctagcattgcccacgttcatttatatgttaatgaatctag 64
>45176_miR446:micropc
Length = 86
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 31 ccacattcatatagatgctaatgaatcta 59
|||||||||||| |||| |||||||||||
Sbjct: 80 ccacattcatattgatgttaatgaatcta 52
>46833_miR446:micropc
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 25 cattgtccacattcatatagatgctaatgaat 56
|||| ||||||||||||| |||| ||||||||
Sbjct: 81 cattttccacattcatattgatgttaatgaat 50
