miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>45260_miR819:micropc
          Length = 116

 Score =  224 bits (113), Expect = 2e-59
 Identities = 116/116 (100%)
 Strand = Plus / Plus

                                                                       
Query: 33  ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 92
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60

                                                                   
Query: 93  gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116



 Score =  107 bits (54), Expect = 3e-24
 Identities = 100/116 (86%)
 Strand = Plus / Minus

                                                                       
Query: 33  ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 92
           |||||||||||||||| ||  |||||||| ||||| |||||||||||| || ||| ||||
Sbjct: 116 ttataagactttctagtatngtccatatttatatagatgttaatgaatatagacacatat 57

                                                                   
Query: 93  gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 148
            ||| || |||||||||||| ||||| ||||||||  || ||||||||||||||||
Sbjct: 56  atgtttagattcattaacatatatatgaatatggataatgctagaaagtcttataa 1




>45075_miR819:micropc
          Length = 116

 Score =  224 bits (113), Expect = 2e-59
 Identities = 116/116 (100%)
 Strand = Plus / Plus

                                                                       
Query: 33  ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 92
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 60

                                                                   
Query: 93  gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116



 Score =  107 bits (54), Expect = 3e-24
 Identities = 100/116 (86%)
 Strand = Plus / Minus

                                                                       
Query: 33  ttataagactttctagcattatccatattcatatatatgttaatgaatctaaacatatat 92
           |||||||||||||||| ||  |||||||| ||||| |||||||||||| || ||| ||||
Sbjct: 116 ttataagactttctagtatngtccatatttatatagatgttaatgaatatagacacatat 57

                                                                   
Query: 93  gtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 148
            ||| || |||||||||||| ||||| ||||||||  || ||||||||||||||||
Sbjct: 56  atgtttagattcattaacatatatatgaatatggataatgctagaaagtcttataa 1




>44978_miR1130:micropc
          Length = 144

 Score =  107 bits (54), Expect = 3e-24
 Identities = 110/128 (85%), Gaps = 2/128 (1%)
 Strand = Plus / Minus

                                                                       
Query: 36  taagactttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtg 95
           |||||||||||||||||| |  |||||||||| |||| ||| ||||||||||||||||||
Sbjct: 128 taagactttctagcattacctgtattcatatagatgtcaataaatctaaacatatatgtg 69

                                                                       
Query: 96  t--ctatattcattaacatctatataaatatggacnatactagaaagtcttataatctga 153
           |   || |||||||| ||| ||||||||| ||||| || ||||||||||||| | | |||
Sbjct: 68  tgcttagattcattagcatatatataaatgtggacaatgctagaaagtcttacattatga 9

                   
Query: 154 aacggagg 161
           ||||||||
Sbjct: 8   aacggagg 1



 Score = 77.8 bits (39), Expect = 3e-15
 Identities = 90/106 (84%), Gaps = 2/106 (1%)
 Strand = Plus / Plus

                                                                       
Query: 20  cctccgtatcatattataagactttctagcattatccatattcatatatatgttaatgaa 79
           ||||||| ||||| | ||||||||||||||||| |||| ||| ||||||||| |||||||
Sbjct: 1   cctccgtttcataatgtaagactttctagcattgtccacatttatatatatgctaatgaa 60

                                                         
Query: 80  tctaa--acatatatgtgtctatattcattaacatctatataaata 123
           |||||  ||| |||| ||| || ||| ||| |||||||||| ||||
Sbjct: 61  tctaagcacacatatatgtttagatttattgacatctatatgaata 106




>46464_miR1132:micropc
          Length = 149

 Score = 81.8 bits (41), Expect = 2e-16
 Identities = 118/143 (82%), Gaps = 2/143 (1%)
 Strand = Plus / Minus

                                                                       
Query: 20  cctccgtatcatattataagactttctagcattatccatattcatatatatgttaatgaa 79
           ||||||| ||||| | || || ||||||||| || ||||||| ||||| | |||||||||
Sbjct: 146 cctccgtttcataatgtaggattttctagcactacccatatttatatagaagttaatgaa 87

                                                                       
Query: 80  tctaa--acatatatgtgtctatattcattaacatctatataaatatggacnatactaga 137
           |||||  |||||||| || ||| ||||||||| |||||||| ||||||  | || |||||
Sbjct: 86  tctaaacacatatatatgcctagattcattaatatctatatgaatatgtgcaatgctaga 27

                                  
Query: 138 aagtcttataatctgaaacggag 160
           |||| ||| | | ||||||||||
Sbjct: 26  aagtattacattgtgaaacggag 4



 Score = 75.8 bits (38), Expect = 1e-14
 Identities = 77/89 (86%), Gaps = 2/89 (2%)
 Strand = Plus / Plus

                                                                       
Query: 40  actttctagcattatccatattcatatatatgttaatgaatctaaacatatat--gtgtc 97
           |||||||||||||   |||||||||||| || ||||||||||||  |||||||  |||| 
Sbjct: 23  actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82

                                        
Query: 98  tatattcattaacatctatataaatatgg 126
           || |||||||||| |||||||||||||||
Sbjct: 83  tagattcattaacttctatataaatatgg 111




>45687_miR819:micropc
          Length = 84

 Score = 81.8 bits (41), Expect = 2e-16
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                               
Query: 28 tcatattataagactttctagcattatccatattcatatatatgttaatgaat 80
          |||||||||||||||||||||||||  ||| ||||||||||||||||||||||
Sbjct: 84 tcatattataagactttctagcattgcccacattcatatatatgttaatgaat 32



 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                            
Query: 101 attcattaacatctatataaatatggacnatactagaaagtcttataat 149
           |||||||||||| ||||| ||| ||| | || |||||||||||||||||
Sbjct: 32  attcattaacatatatatgaatgtgggcaatgctagaaagtcttataat 80




>45514_miR1132:micropc
          Length = 149

 Score = 81.8 bits (41), Expect = 2e-16
 Identities = 118/143 (82%), Gaps = 2/143 (1%)
 Strand = Plus / Minus

                                                                       
Query: 20  cctccgtatcatattataagactttctagcattatccatattcatatatatgttaatgaa 79
           ||||||| ||||| | || || ||||||||| || ||||||| ||||| | |||||||||
Sbjct: 146 cctccgtttcataatgtaggattttctagcactacccatatttatatagaagttaatgaa 87

                                                                       
Query: 80  tctaa--acatatatgtgtctatattcattaacatctatataaatatggacnatactaga 137
           |||||  |||||||| || ||| ||||||||| |||||||| ||||||  | || |||||
Sbjct: 86  tctaaacacatatatatgcctagattcattaatatctatatgaatatgtgcaatgctaga 27

                                  
Query: 138 aagtcttataatctgaaacggag 160
           |||| ||| | | ||||||||||
Sbjct: 26  aagtattacattgtgaaacggag 4



 Score = 75.8 bits (38), Expect = 1e-14
 Identities = 77/89 (86%), Gaps = 2/89 (2%)
 Strand = Plus / Plus

                                                                       
Query: 40  actttctagcattatccatattcatatatatgttaatgaatctaaacatatat--gtgtc 97
           |||||||||||||   |||||||||||| || ||||||||||||  |||||||  |||| 
Sbjct: 23  actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82

                                        
Query: 98  tatattcattaacatctatataaatatgg 126
           || |||||||||| |||||||||||||||
Sbjct: 83  tagattcattaacttctatataaatatgg 111




>45099_miR1132:micropc
          Length = 149

 Score = 81.8 bits (41), Expect = 2e-16
 Identities = 118/143 (82%), Gaps = 2/143 (1%)
 Strand = Plus / Minus

                                                                       
Query: 20  cctccgtatcatattataagactttctagcattatccatattcatatatatgttaatgaa 79
           ||||||| ||||| | || || ||||||||| || ||||||| ||||| | |||||||||
Sbjct: 146 cctccgtttcataatgtaggattttctagcactacccatatttatatagaagttaatgaa 87

                                                                       
Query: 80  tctaa--acatatatgtgtctatattcattaacatctatataaatatggacnatactaga 137
           |||||  |||||||| || ||| ||||||||| |||||||| ||||||  | || |||||
Sbjct: 86  tctaaacacatatatatgcctagattcattaatatctatatgaatatgtgcaatgctaga 27

                                  
Query: 138 aagtcttataatctgaaacggag 160
           |||| ||| | | ||||||||||
Sbjct: 26  aagtattacattgtgaaacggag 4



 Score = 75.8 bits (38), Expect = 1e-14
 Identities = 77/89 (86%), Gaps = 2/89 (2%)
 Strand = Plus / Plus

                                                                       
Query: 40  actttctagcattatccatattcatatatatgttaatgaatctaaacatatat--gtgtc 97
           |||||||||||||   |||||||||||| || ||||||||||||  |||||||  |||| 
Sbjct: 23  actttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtt 82

                                        
Query: 98  tatattcattaacatctatataaatatgg 126
           || |||||||||| |||||||||||||||
Sbjct: 83  tagattcattaacttctatataaatatgg 111




>46670_miR809:micropc
          Length = 97

 Score = 73.8 bits (37), Expect = 4e-14
 Identities = 67/76 (88%), Gaps = 2/76 (2%)
 Strand = Plus / Minus

                                                                       
Query: 43  ttctagcattatccatattcatatatatgttaatgaatctaaacatatat--gtgtctat 100
           ||||| ||||| ||| |||||||||||||||||||||| || ||||||||  ||||||| 
Sbjct: 97  ttctaacattacccacattcatatatatgttaatgaatgtagacatatatgtgtgtctag 38

                           
Query: 101 attcattaacatctat 116
           ||| ||||||||||||
Sbjct: 37  atttattaacatctat 22



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 63/75 (84%), Gaps = 3/75 (4%)
 Strand = Plus / Plus

                                                                       
Query: 46  tagcattatccatattcatatatatgttaatgaatctaaacata--tatgtgtctatatt 103
           ||||||| || ||||||| ||| |||||||| |||||| ||| |  ||| |||||| |||
Sbjct: 4   tagcattgtctatattca-atagatgttaataaatctagacacacatatatgtctacatt 62

                          
Query: 104 cattaacatctatat 118
           ||||||||| |||||
Sbjct: 63  cattaacatatatat 77




>45731_miR446:micropc
          Length = 86

 Score = 73.8 bits (37), Expect = 4e-14
 Identities = 64/72 (88%), Gaps = 2/72 (2%)
 Strand = Plus / Plus

                                                                       
Query: 49  cattatccatattcatatatatgttaatgaatctaaacatata--tgtgtctatattcat 106
           |||| |||| ||||||||| || ||||||||||||||||||||  |||||||| ||||||
Sbjct: 1   cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60

                       
Query: 107 taacatctatat 118
           ||||||| ||||
Sbjct: 61  taacatcaatat 72



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 60/72 (83%), Gaps = 2/72 (2%)
 Strand = Plus / Minus

                                                                       
Query: 59  attcatatatatgttaatgaatct--aaacatatatgtgtctatattcattaacatctat 116
           ||||||||  ||||||||||||||  | ||| |||| ||| || ||||||||| ||||||
Sbjct: 76  attcatattgatgttaatgaatctagacacacatatatgtttagattcattaaaatctat 17

                       
Query: 117 ataaatatggac 128
           || ||| |||||
Sbjct: 16  atgaatgtggac 5




>45215_miR1120:micropc
          Length = 142

 Score = 73.8 bits (37), Expect = 4e-14
 Identities = 102/123 (82%), Gaps = 2/123 (1%)
 Strand = Plus / Plus

                                                                       
Query: 40  actttctagcattatccatattcatatatatgttaatgaatctaaacata--tatgtgtc 97
           |||||||||||||  |||  ||||| |||||||||||||||||| | |||  ||||||| 
Sbjct: 20  actttctagcattgcccacgttcatttatatgttaatgaatctagatatatttatgtgtt 79

                                                                       
Query: 98  tatattcattaacatctatataaatatggacnatactagaaagtcttataatctgaaacg 157
           || ||||||||||||||||||  |||||  | ||  |||||| ||||||| | |||||||
Sbjct: 80  taaattcattaacatctatatgtatatgagcaatgttagaaattcttatattatgaaacg 139

              
Query: 158 gag 160
           |||
Sbjct: 140 gag 142



 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                       
Query: 21  ctccgtatcatattataagactttctagcattatccatattcatatatatgttaatgaat 80
           |||||| ||||| ||||||| |||||| ||||   ||||| |||||| ||||||||||||
Sbjct: 142 ctccgtttcataatataagaatttctaacattgctcatatacatatagatgttaatgaat 83

                  
Query: 81  ctaaaca 87
            ||||||
Sbjct: 82  ttaaaca 76




>44980_miR808:micropc
          Length = 97

 Score = 73.8 bits (37), Expect = 4e-14
 Identities = 67/76 (88%), Gaps = 2/76 (2%)
 Strand = Plus / Minus

                                                                       
Query: 43  ttctagcattatccatattcatatatatgttaatgaatctaaacatatat--gtgtctat 100
           ||||| ||||| ||| |||||||||||||||||||||| || ||||||||  ||||||| 
Sbjct: 97  ttctaacattacccacattcatatatatgttaatgaatgtagacatatatgtgtgtctag 38

                           
Query: 101 attcattaacatctat 116
           ||| ||||||||||||
Sbjct: 37  atttattaacatctat 22



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 63/75 (84%), Gaps = 3/75 (4%)
 Strand = Plus / Plus

                                                                       
Query: 46  tagcattatccatattcatatatatgttaatgaatctaaacata--tatgtgtctatatt 103
           ||||||| || ||||||| ||| |||||||| |||||| ||| |  ||| |||||| |||
Sbjct: 4   tagcattgtctatattca-atagatgttaataaatctagacacacatatatgtctacatt 62

                          
Query: 104 cattaacatctatat 118
           ||||||||| |||||
Sbjct: 63  cattaacatatatat 77




>46336_miR809:micropc
          Length = 98

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 80/96 (83%)
 Strand = Plus / Minus

                                                                       
Query: 43  ttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatat 102
           |||||||||| | || |||||||| ||| |||||||||||| |||||||| | | || ||
Sbjct: 97  ttctagcatttttcacattcatatttatattaatgaatctagacatatatctatttaaat 38

                                               
Query: 103 tcattaacatctatataaatatggacnatactagaa 138
           |||| || ||| ||||||||||||   |||||||||
Sbjct: 37  tcatcaatatcaatataaatatggtgaatactagaa 2




>45839_miR809:micropc
          Length = 98

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 80/96 (83%)
 Strand = Plus / Minus

                                                                       
Query: 43  ttctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatat 102
           |||||||||| | || |||||||| ||| |||||||||||| |||||||| | | || ||
Sbjct: 97  ttctagcatttttcacattcatatttatattaatgaatctagacatatatctatttaaat 38

                                               
Query: 103 tcattaacatctatataaatatggacnatactagaa 138
           |||| || ||| ||||||||||||   |||||||||
Sbjct: 37  tcatcaatatcaatataaatatggtgaatactagaa 2




>44937_miR819:micropc
          Length = 94

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 62/71 (87%), Gaps = 2/71 (2%)
 Strand = Plus / Minus

                                                                      
Query: 28 tcatattataagactttctagcattatccatattcatatatat--gttaatgaatctaaa 85
          ||||||||||||||||||||  |||  ||||||| ||||||||  |||||||| |||| |
Sbjct: 94 tcatattataagactttctattattgcccatatttatatatatatgttaatgagtctata 35

                     
Query: 86 catatatgtgt 96
          |||||||||||
Sbjct: 34 catatatgtgt 24



 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 114 tatataaatatggacnatactagaaagtcttataat 149
           ||||||||||||| | ||| ||||||||||||||||
Sbjct: 55  tatataaatatgggcaataatagaaagtcttataat 90




>46060_miR809:micropc
          Length = 87

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                   
Query: 43 ttctagcattatccatattcatatatatgttaatgaatcta 83
          |||||||||| |||||||||||||  |||||||||||||||
Sbjct: 2  ttctagcattttccatattcatattgatgttaatgaatcta 42



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 95  gtctatattcattaacatctatataaatatgga 127
           ||||| ||||||||||||| |||| ||||||||
Sbjct: 45  gtctagattcattaacatcaatatgaatatgga 13




>46637_miR446:micropc
          Length = 80

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 59/69 (85%), Gaps = 2/69 (2%)
 Strand = Plus / Plus

                                                                       
Query: 60  ttcatatatatgttaatgaatctaaacatatatgtgt--ctatattcattaacatctata 117
           |||||||  ||||||||||||||| |||||||| | |  ||| ||||||||||||| |||
Sbjct: 8   ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 67

                    
Query: 118 taaatatgg 126
           | |||||||
Sbjct: 68  tgaatatgg 76



 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 52/60 (86%), Gaps = 2/60 (3%)
 Strand = Plus / Minus

                                                                       
Query: 55  ccatattcatatatatgttaatgaatcta--aacatatatgtgtctatattcattaacat 112
           ||||||||||||  |||||||||||||||   | |||||| |||||| ||||||||||||
Sbjct: 76  ccatattcatattgatgttaatgaatctagctagatatatatgtctagattcattaacat 17




>46801_miR809:micropc
          Length = 110

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 69 atgttaatgaatctaaacatatat 92
          ||||||||||||||||||||||||
Sbjct: 73 atgttaatgaatctaaacatatat 50



 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 56/66 (84%), Gaps = 2/66 (3%)
 Strand = Plus / Plus

                                                                       
Query: 59  attcatatatatgttaatgaatctaaaca--tatatgtgtctatattcattaacatctat 116
           ||||||||  ||||||||||||||| | |  ||||| ||| || ||||||||||||| ||
Sbjct: 18  attcatattaatgttaatgaatctagatagatatatatgtttagattcattaacatcaat 77

                 
Query: 117 ataaat 122
           ||||||
Sbjct: 78  ataaat 83




>45708_miR809:micropc
          Length = 100

 Score = 46.1 bits (23), Expect = 9e-06
 Identities = 68/82 (82%), Gaps = 2/82 (2%)
 Strand = Plus / Plus

                                                                       
Query: 43  ttctagcattatccatattcatatatatgttaatgaatct--aaacatatatgtgtctat 100
           ||||| |||| | |||||||||||  || |||||||||||  | | |||||| |||||| 
Sbjct: 2   ttctaacatttttcatattcatattgatattaatgaatctagatagatatatatgtctag 61

                                 
Query: 101 attcattaacatctatataaat 122
           |||||||| |||| ||||||||
Sbjct: 62  attcattagcatcaatataaat 83