miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46802_miR1436:micropc
          Length = 138

 Score =  232 bits (117), Expect = 6e-62
 Identities = 133/138 (96%), Gaps = 1/138 (0%)
 Strand = Plus / Plus

                                                                       
Query: 13  actccctccgtcccaaaagtgaatctagctctgtatg-gacacattatagtacaacgaat 71
           |||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||
Sbjct: 1   actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60

                                                                       
Query: 72  ctggatagaaatatgtctagattcgtagtactaggatgtgtcgcatcgagtgttggtttt 131
           |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120

                             
Query: 132 ttatgggacggagggagt 149
           ||||||||||||||||||
Sbjct: 121 ttatgggacggagggagt 138




>46498_miR1436:micropc
          Length = 138

 Score =  232 bits (117), Expect = 6e-62
 Identities = 133/138 (96%), Gaps = 1/138 (0%)
 Strand = Plus / Plus

                                                                       
Query: 13  actccctccgtcccaaaagtgaatctagctctgtatg-gacacattatagtacaacgaat 71
           |||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||
Sbjct: 1   actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60

                                                                       
Query: 72  ctggatagaaatatgtctagattcgtagtactaggatgtgtcgcatcgagtgttggtttt 131
           |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120

                             
Query: 132 ttatgggacggagggagt 149
           ||||||||||||||||||
Sbjct: 121 ttatgggacggagggagt 138




>46084_miR1436:micropc
          Length = 138

 Score =  232 bits (117), Expect = 6e-62
 Identities = 133/138 (96%), Gaps = 1/138 (0%)
 Strand = Plus / Plus

                                                                       
Query: 13  actccctccgtcccaaaagtgaatctagctctgtatg-gacacattatagtacaacgaat 71
           |||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||
Sbjct: 1   actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60

                                                                       
Query: 72  ctggatagaaatatgtctagattcgtagtactaggatgtgtcgcatcgagtgttggtttt 131
           |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120

                             
Query: 132 ttatgggacggagggagt 149
           ||||||||||||||||||
Sbjct: 121 ttatgggacggagggagt 138




>45568_miR1436:micropc
          Length = 138

 Score =  232 bits (117), Expect = 6e-62
 Identities = 133/138 (96%), Gaps = 1/138 (0%)
 Strand = Plus / Plus

                                                                       
Query: 13  actccctccgtcccaaaagtgaatctagctctgtatg-gacacattatagtacaacgaat 71
           |||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||
Sbjct: 1   actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60

                                                                       
Query: 72  ctggatagaaatatgtctagattcgtagtactaggatgtgtcgcatcgagtgttggtttt 131
           |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120

                             
Query: 132 ttatgggacggagggagt 149
           ||||||||||||||||||
Sbjct: 121 ttatgggacggagggagt 138




>45497_miR1436:micropc
          Length = 138

 Score =  232 bits (117), Expect = 6e-62
 Identities = 133/138 (96%), Gaps = 1/138 (0%)
 Strand = Plus / Plus

                                                                       
Query: 13  actccctccgtcccaaaagtgaatctagctctgtatg-gacacattatagtacaacgaat 71
           |||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||
Sbjct: 1   actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60

                                                                       
Query: 72  ctggatagaaatatgtctagattcgtagtactaggatgtgtcgcatcgagtgttggtttt 131
           |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120

                             
Query: 132 ttatgggacggagggagt 149
           ||||||||||||||||||
Sbjct: 121 ttatgggacggagggagt 138




>45178_miR1436:micropc
          Length = 138

 Score =  232 bits (117), Expect = 6e-62
 Identities = 133/138 (96%), Gaps = 1/138 (0%)
 Strand = Plus / Plus

                                                                       
Query: 13  actccctccgtcccaaaagtgaatctagctctgtatg-gacacattatagtacaacgaat 71
           |||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||
Sbjct: 1   actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60

                                                                       
Query: 72  ctggatagaaatatgtctagattcgtagtactaggatgtgtcgcatcgagtgttggtttt 131
           |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120

                             
Query: 132 ttatgggacggagggagt 149
           ||||||||||||||||||
Sbjct: 121 ttatgggacggagggagt 138




>45591_miR1128:micropc
          Length = 141

 Score =  212 bits (107), Expect = 6e-56
 Identities = 134/141 (95%), Gaps = 2/141 (1%)
 Strand = Plus / Plus

                                                                       
Query: 12  tactccctccgtcccaaaagtgaatctagc-tctgtatg-gacacattatagtacaacga 69
           |||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 1   tactccctccgtccgaaaagtgaatctagcctctgtatgtgacacattatagtacaacga 60

                                                                       
Query: 70  atctggatagaaatatgtctagattcgtagtactaggatgtgtcgcatcgagtgttggtt 129
           || ||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 61  atgtggatagaaatatgtgtagattcgtagtactaggatntgtcgcatcgagtnttggtt 120

                                
Query: 130 ttttatgggacggagggagtg 150
           |||||||||||||||||||||
Sbjct: 121 ttttatgggacggagggagtg 141




>44936_miR1128:micropc
          Length = 141

 Score =  212 bits (107), Expect = 6e-56
 Identities = 134/141 (95%), Gaps = 2/141 (1%)
 Strand = Plus / Plus

                                                                       
Query: 12  tactccctccgtcccaaaagtgaatctagc-tctgtatg-gacacattatagtacaacga 69
           |||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 1   tactccctccgtccgaaaagtgaatctagcctctgtatgtgacacattatagtacaacga 60

                                                                       
Query: 70  atctggatagaaatatgtctagattcgtagtactaggatgtgtcgcatcgagtgttggtt 129
           || ||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 61  atgtggatagaaatatgtgtagattcgtagtactaggatntgtcgcatcgagtnttggtt 120

                                
Query: 130 ttttatgggacggagggagtg 150
           |||||||||||||||||||||
Sbjct: 121 ttttatgggacggagggagtg 141




>45802_miR818:micropc
          Length = 134

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 68  gaatctggatagaaatatgtctagattcgtagtactaggat 108
           |||| ||||||| | |||||| |||||||||||| ||||||
Sbjct: 55  gaatttggataggagtatgtccagattcgtagtattaggat 95