miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46802_miR1436:micropc
          Length = 138

 Score =  256 bits (129), Expect = 5e-69
 Identities = 138/138 (100%)
 Strand = Plus / Plus

                                                                       
Query: 23  actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 82
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60

                                                                       
Query: 83  ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120

                             
Query: 143 ttatgggacggagggagt 160
           ||||||||||||||||||
Sbjct: 121 ttatgggacggagggagt 138




>46498_miR1436:micropc
          Length = 138

 Score =  256 bits (129), Expect = 5e-69
 Identities = 138/138 (100%)
 Strand = Plus / Plus

                                                                       
Query: 23  actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 82
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60

                                                                       
Query: 83  ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120

                             
Query: 143 ttatgggacggagggagt 160
           ||||||||||||||||||
Sbjct: 121 ttatgggacggagggagt 138




>46084_miR1436:micropc
          Length = 138

 Score =  256 bits (129), Expect = 5e-69
 Identities = 138/138 (100%)
 Strand = Plus / Plus

                                                                       
Query: 23  actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 82
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60

                                                                       
Query: 83  ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120

                             
Query: 143 ttatgggacggagggagt 160
           ||||||||||||||||||
Sbjct: 121 ttatgggacggagggagt 138




>45568_miR1436:micropc
          Length = 138

 Score =  256 bits (129), Expect = 5e-69
 Identities = 138/138 (100%)
 Strand = Plus / Plus

                                                                       
Query: 23  actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 82
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60

                                                                       
Query: 83  ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120

                             
Query: 143 ttatgggacggagggagt 160
           ||||||||||||||||||
Sbjct: 121 ttatgggacggagggagt 138




>45497_miR1436:micropc
          Length = 138

 Score =  256 bits (129), Expect = 5e-69
 Identities = 138/138 (100%)
 Strand = Plus / Plus

                                                                       
Query: 23  actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 82
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60

                                                                       
Query: 83  ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120

                             
Query: 143 ttatgggacggagggagt 160
           ||||||||||||||||||
Sbjct: 121 ttatgggacggagggagt 138




>45178_miR1436:micropc
          Length = 138

 Score =  256 bits (129), Expect = 5e-69
 Identities = 138/138 (100%)
 Strand = Plus / Plus

                                                                       
Query: 23  actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 82
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   actccctccgtcccaaaagtnaatctanctctgtatgtgacacattatagtacaacgaat 60

                                                                       
Query: 83  ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtttt 120

                             
Query: 143 ttatgggacggagggagt 160
           ||||||||||||||||||
Sbjct: 121 ttatgggacggagggagt 138




>45591_miR1128:micropc
          Length = 141

 Score =  218 bits (110), Expect = 1e-57
 Identities = 133/141 (94%), Gaps = 1/141 (0%)
 Strand = Plus / Plus

                                                                       
Query: 22  tactccctccgtcccaaaagtnaatctanc-tctgtatgtgacacattatagtacaacga 80
           |||||||||||||| |||||| |||||| | |||||||||||||||||||||||||||||
Sbjct: 1   tactccctccgtccgaaaagtgaatctagcctctgtatgtgacacattatagtacaacga 60

                                                                       
Query: 81  atctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtt 140
           || |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||
Sbjct: 61  atgtggatagaaatatgtgtagattcgtagtactaggatntgtcgcatcgagtnttggtt 120

                                
Query: 141 ttttatgggacggagggagtg 161
           |||||||||||||||||||||
Sbjct: 121 ttttatgggacggagggagtg 141




>44936_miR1128:micropc
          Length = 141

 Score =  218 bits (110), Expect = 1e-57
 Identities = 133/141 (94%), Gaps = 1/141 (0%)
 Strand = Plus / Plus

                                                                       
Query: 22  tactccctccgtcccaaaagtnaatctanc-tctgtatgtgacacattatagtacaacga 80
           |||||||||||||| |||||| |||||| | |||||||||||||||||||||||||||||
Sbjct: 1   tactccctccgtccgaaaagtgaatctagcctctgtatgtgacacattatagtacaacga 60

                                                                       
Query: 81  atctggatagaaatatgtgtanattcgtagtactaggatgtgtcgcatcgagtgttggtt 140
           || |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||
Sbjct: 61  atgtggatagaaatatgtgtagattcgtagtactaggatntgtcgcatcgagtnttggtt 120

                                
Query: 141 ttttatgggacggagggagtg 161
           |||||||||||||||||||||
Sbjct: 121 ttttatgggacggagggagtg 141




>46674_miR816:micropc
          Length = 68

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 59 gtgacacattatagtacaacgaatctgga 87
          |||||| ||| ||||||||||||||||||
Sbjct: 1  gtgacatattctagtacaacgaatctgga 29