miRNEST 2.0, an integrative microRNA resource :: BLAST
>45419_miR319:micropc
Length = 176
Score = 65.9 bits (33), Expect = 1e-11
Identities = 61/69 (88%), Gaps = 1/69 (1%)
Strand = Plus / Plus
Query: 5 gagagctctcttcagtccactcatgggcgggcgaaggttttgaattatctgccgactcat 64
||||||| ||||||||||||||||||| || | ||| ||| ||||| ||||||||||||
Sbjct: 1 gagagctttcttcagtccactcatgggtggcggtagggttt-aattagctgccgactcat 59
Query: 65 tcattcaaa 73
|||||||||
Sbjct: 60 tcattcaaa 68
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctccc 182
|||| |||||||||||||||||||||
Sbjct: 151 ctgtacttggactgaagggagctccc 176
>46724_miR319:micropc
Length = 173
Score = 61.9 bits (31), Expect = 2e-10
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 7 gagctctcttcagtccactcatgggcgggcgaaggttttgaattatctgccgactcattc 66
||||| ||||||||||||||||||| || | ||| ||| ||||| ||||||||||||||
Sbjct: 1 gagctttcttcagtccactcatgggtggcggtagggttt-aattagctgccgactcattc 59
Query: 67 attcaaa 73
|||||||
Sbjct: 60 attcaaa 66
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctcc 181
|||| ||||||||||||||||||||
Sbjct: 149 ctgtacttggactgaagggagctcc 173
>46473_miR159:micropc
Length = 172
Score = 61.9 bits (31), Expect = 2e-10
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 7 gagctctcttcagtccactcatgggcgggcgaaggttttgaattatctgccgactcattc 66
||||| ||||||||||||||||||| || | ||| ||| ||||| ||||||||||||||
Sbjct: 1 gagctttcttcagtccactcatgggtggcggtagggttt-aattagctgccgactcattc 59
Query: 67 attcaaa 73
|||||||
Sbjct: 60 attcaaa 66
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctc 180
|||| |||||||||||||||||||
Sbjct: 149 ctgtacttggactgaagggagctc 172
>45333_miR319:micropc
Length = 173
Score = 61.9 bits (31), Expect = 2e-10
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 7 gagctctcttcagtccactcatgggcgggcgaaggttttgaattatctgccgactcattc 66
||||| ||||||||||||||||||| || | ||| ||| ||||| ||||||||||||||
Sbjct: 1 gagctttcttcagtccactcatgggtggcggtagggttt-aattagctgccgactcattc 59
Query: 67 attcaaa 73
|||||||
Sbjct: 60 attcaaa 66
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctcc 181
|||| ||||||||||||||||||||
Sbjct: 149 ctgtacttggactgaagggagctcc 173
>46281_miR319:micropc
Length = 184
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 153 ttctctgtgcttggactgaagggagctcc 181
|||||||||||||||||||||||||||||
Sbjct: 154 ttctctgtgcttggactgaagggagctcc 182
>46127_miR319:micropc
Length = 182
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 153 ttctctgtgcttggactgaagggagctcc 181
|||||||||||||||||||||||||||||
Sbjct: 153 ttctctgtgcttggactgaagggagctcc 181
>46095_miR319:micropc
Length = 172
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 147 cttctcttctctgtgcttggactgaagggagctccct 183
|||| ||||||| ||||||||||||||||||||||||
Sbjct: 136 cttcacttctctatgcttggactgaagggagctccct 172
>45623_miR319:micropc
Length = 170
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 147 cttctcttctctgtgcttggactgaagggagctccc 182
|||| ||||||| |||||||||||||||||||||||
Sbjct: 135 cttcacttctctatgcttggactgaagggagctccc 170
>45297_miR319:micropc
Length = 170
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 147 cttctcttctctgtgcttggactgaagggagctccc 182
|||| ||||||| |||||||||||||||||||||||
Sbjct: 135 cttcacttctctatgcttggactgaagggagctccc 170
>46662_miR319:micropc
Length = 167
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 147 cttctcttctctgtgcttggactgaagggagctcc 181
|||| ||||||| ||||||||||||||||||||||
Sbjct: 133 cttcacttctctatgcttggactgaagggagctcc 167
>46415_miR319:micropc
Length = 172
Score = 54.0 bits (27), Expect = 4e-08
Identities = 68/79 (86%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 104 tgctattgtgaatgtgtgaatgatgcgggagataaatttc-atacttctcttctctgtgc 162
||||| ||||| || ||||||||||||||||||| |||| || | |||||| || |||
Sbjct: 95 tgctactgtgattgagtgaatgatgcgggagatagttttctattcctctctt-tccttgc 153
Query: 163 ttggactgaagggagctcc 181
|||||||||||||||||||
Sbjct: 154 ttggactgaagggagctcc 172
>46362_miR319:micropc
Length = 174
Score = 54.0 bits (27), Expect = 4e-08
Identities = 68/79 (86%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 104 tgctattgtgaatgtgtgaatgatgcgggagataaatttc-atacttctcttctctgtgc 162
||||| ||||| || ||||||||||||||||||| |||| || | |||||| || |||
Sbjct: 96 tgctactgtgattgagtgaatgatgcgggagatagttttctattcctctctt-tccttgc 154
Query: 163 ttggactgaagggagctcc 181
|||||||||||||||||||
Sbjct: 155 ttggactgaagggagctcc 173
>46323_miR319:micropc
Length = 176
Score = 54.0 bits (27), Expect = 4e-08
Identities = 68/79 (86%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 104 tgctattgtgaatgtgtgaatgatgcgggagataaatttc-atacttctcttctctgtgc 162
||||| ||||| || ||||||||||||||||||| |||| || | |||||| || |||
Sbjct: 97 tgctactgtgattgagtgaatgatgcgggagatagttttctattcctctctt-tccttgc 155
Query: 163 ttggactgaagggagctcc 181
|||||||||||||||||||
Sbjct: 156 ttggactgaagggagctcc 174
>46215_miR319:micropc
Length = 168
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 147 cttctcttctctgtgcttggactgaagggagctcc 181
|||| ||||||| ||||||||||||||||||||||
Sbjct: 134 cttcacttctctatgcttggactgaagggagctcc 168
>45663_miR319:micropc
Length = 168
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 147 cttctcttctctgtgcttggactgaagggagctcc 181
|||| ||||||| ||||||||||||||||||||||
Sbjct: 134 cttcacttctctatgcttggactgaagggagctcc 168
>45592_miR319:micropc
Length = 172
Score = 54.0 bits (27), Expect = 4e-08
Identities = 68/79 (86%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 104 tgctattgtgaatgtgtgaatgatgcgggagataaatttc-atacttctcttctctgtgc 162
||||| ||||| || ||||||||||||||||||| |||| || | |||||| || |||
Sbjct: 95 tgctactgtgattgagtgaatgatgcgggagatagttttctattcctctctt-tccttgc 153
Query: 163 ttggactgaagggagctcc 181
|||||||||||||||||||
Sbjct: 154 ttggactgaagggagctcc 172
>45367_miR159:micropc
Length = 174
Score = 54.0 bits (27), Expect = 4e-08
Identities = 68/79 (86%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 104 tgctattgtgaatgtgtgaatgatgcgggagataaatttc-atacttctcttctctgtgc 162
||||| ||||| || ||||||||||||||||||| |||| || | |||||| || |||
Sbjct: 96 tgctactgtgattgagtgaatgatgcgggagatagttttctattcctctctt-tccttgc 154
Query: 163 ttggactgaagggagctcc 181
|||||||||||||||||||
Sbjct: 155 ttggactgaagggagctcc 173
>46382_miR319:micropc
Length = 169
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctccc 182
||||||||||||||||||||||||||
Sbjct: 144 ctgtgcttggactgaagggagctccc 169
>46228_miR159:micropc
Length = 166
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 147 cttctcttctctgtgcttggactgaagggagctc 180
|||| ||||||| |||||||||||||||||||||
Sbjct: 133 cttcacttctctatgcttggactgaagggagctc 166
>45644_miR319:micropc
Length = 169
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctccc 182
||||||||||||||||||||||||||
Sbjct: 144 ctgtgcttggactgaagggagctccc 169
>45141_miR159:micropc
Length = 166
Score = 52.0 bits (26), Expect = 2e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 147 cttctcttctctgtgcttggactgaagggagctc 180
|||| ||||||| |||||||||||||||||||||
Sbjct: 133 cttcacttctctatgcttggactgaagggagctc 166
>45128_miR159:micropc
Length = 169
Score = 52.0 bits (26), Expect = 2e-07
Identities = 67/78 (85%), Gaps = 2/78 (2%)
Strand = Plus / Plus
Query: 104 tgctattgtgaatgtgtgaatgatgcgggagataaatttc-atacttctcttctctgtgc 162
||||| ||||| || ||||||||||||||||||| |||| || | |||||| || |||
Sbjct: 93 tgctactgtgattgagtgaatgatgcgggagatagttttctattcctctctt-tccttgc 151
Query: 163 ttggactgaagggagctc 180
||||||||||||||||||
Sbjct: 152 ttggactgaagggagctc 169
>46580_miR319:micropc
Length = 187
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 153 ttctctgtgcttggactgaagggagctcc 181
||||||| |||||||||||||||||||||
Sbjct: 157 ttctctgagcttggactgaagggagctcc 185
>45515_miR319:micropc
Length = 167
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctcc 181
|||||||||||||||||||||||||
Sbjct: 143 ctgtgcttggactgaagggagctcc 167
>45485_miR319:micropc
Length = 167
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctcc 181
|||||||||||||||||||||||||
Sbjct: 143 ctgtgcttggactgaagggagctcc 167
>45295_miR319:micropc
Length = 185
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 153 ttctctgtgcttggactgaagggagctcc 181
||||||| |||||||||||||||||||||
Sbjct: 156 ttctctgagcttggactgaagggagctcc 184
>45265_miR319:micropc
Length = 183
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 153 ttctctgtgcttggactgaagggagctcc 181
||||||| |||||||||||||||||||||
Sbjct: 155 ttctctgagcttggactgaagggagctcc 183
>45786_miR159:micropc
Length = 165
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctc 180
||||||||||||||||||||||||
Sbjct: 142 ctgtgcttggactgaagggagctc 165
>45262_miR319:micropc
Length = 170
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 4 agagagctctcttcagtccactcatggg 31
|||||||| |||||||||||||||||||
Sbjct: 1 agagagctttcttcagtccactcatggg 28
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctccct 183
|||| ||||||||||||||||||||||
Sbjct: 144 ctgtacttggactgaagggagctccct 170
>46813_miR319:micropc
Length = 172
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctccct 183
|||| ||||||||||||||||||||||
Sbjct: 146 ctgtacttggactgaagggagctccct 172
>46587_miR319:micropc
Length = 196
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctccct 183
|||| ||||||||||||||||||||||
Sbjct: 170 ctgtacttggactgaagggagctccct 196
>46399_miR319:micropc
Length = 168
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 5 gagagctctcttcagtccactcatggg 31
||||||| |||||||||||||||||||
Sbjct: 1 gagagctttcttcagtccactcatggg 27
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctccc 182
|||| |||||||||||||||||||||
Sbjct: 143 ctgtacttggactgaagggagctccc 168
>46740_miR319:micropc
Length = 170
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctccc 182
|||| |||||||||||||||||||||
Sbjct: 145 ctgtacttggactgaagggagctccc 170
>46010_miR319:micropc
Length = 194
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctccc 182
|||| |||||||||||||||||||||
Sbjct: 169 ctgtacttggactgaagggagctccc 194
>46783_miR319:micropc
Length = 173
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 14 cttcagtccactcatgggcgg 34
|||||||||||||||||||||
Sbjct: 8 cttcagtccactcatgggcgg 28
>46667_miR159:micropc
Length = 164
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 gagctctcttcagtccactcatggg 31
||||| |||||||||||||||||||
Sbjct: 1 gagctttcttcagtccactcatggg 25
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctc 180
|||| |||||||||||||||||||
Sbjct: 141 ctgtacttggactgaagggagctc 164
>46608_miR319:micropc
Length = 167
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctcc 181
|||| ||||||||||||||||||||
Sbjct: 143 ctgtacttggactgaagggagctcc 167
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 114 aatgtgtgaatgatgcgggagataaatt 141
|||| ||||||||||||||||| |||||
Sbjct: 101 aatgagtgaatgatgcgggagacaaatt 128
>46559_miR319:micropc
Length = 166
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctcc 181
|||| ||||||||||||||||||||
Sbjct: 142 ctgtacttggactgaagggagctcc 166
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 114 aatgtgtgaatgatgcgggagataaatt 141
|||| ||||||||||||||||| |||||
Sbjct: 100 aatgagtgaatgatgcgggagacaaatt 127
>45926_miR319:micropc
Length = 191
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctcc 181
|||| ||||||||||||||||||||
Sbjct: 167 ctgtacttggactgaagggagctcc 191
>45829_miR319:micropc
Length = 167
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctcc 181
|||| ||||||||||||||||||||
Sbjct: 143 ctgtacttggactgaagggagctcc 167
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 114 aatgtgtgaatgatgcgggagataaatt 141
|||| ||||||||||||||||| |||||
Sbjct: 101 aatgagtgaatgatgcgggagacaaatt 128
>45735_miR319:micropc
Length = 166
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctcc 181
|||| ||||||||||||||||||||
Sbjct: 142 ctgtacttggactgaagggagctcc 166
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 114 aatgtgtgaatgatgcgggagataaatt 141
|||| ||||||||||||||||| |||||
Sbjct: 100 aatgagtgaatgatgcgggagacaaatt 127
>45431_miR319:micropc
Length = 166
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctcc 181
|||| ||||||||||||||||||||
Sbjct: 142 ctgtacttggactgaagggagctcc 166
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 114 aatgtgtgaatgatgcgggagataaatt 141
|||| ||||||||||||||||| |||||
Sbjct: 100 aatgagtgaatgatgcgggagacaaatt 127
>45309_miR319:micropc
Length = 166
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 cttggactgaagggagctccc 182
|||||||||||||||||||||
Sbjct: 146 cttggactgaagggagctccc 166
>45243_miR319:micropc
Length = 191
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctcc 181
|||| ||||||||||||||||||||
Sbjct: 167 ctgtacttggactgaagggagctcc 191
>44834_miR159:micropc
Length = 164
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 gagctctcttcagtccactcatggg 31
||||| |||||||||||||||||||
Sbjct: 1 gagctttcttcagtccactcatggg 25
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctc 180
|||| |||||||||||||||||||
Sbjct: 141 ctgtacttggactgaagggagctc 164
>44802_miR319:micropc
Length = 165
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 7 gagctctcttcagtccactcatggg 31
||||| |||||||||||||||||||
Sbjct: 1 gagctttcttcagtccactcatggg 25
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctcc 181
|||| ||||||||||||||||||||
Sbjct: 141 ctgtacttggactgaagggagctcc 165
>45249_miR319:micropc
Length = 165
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 cttggactgaagggagctcc 181
||||||||||||||||||||
Sbjct: 146 cttggactgaagggagctcc 165
>45129_miR319:micropc
Length = 165
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 cttggactgaagggagctcc 181
||||||||||||||||||||
Sbjct: 146 cttggactgaagggagctcc 165
>44987_miR159:micropc
Length = 166
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 114 aatgtgtgaatgatgcgggagataaatt 141
|||| ||||||||||||||||| |||||
Sbjct: 101 aatgagtgaatgatgcgggagacaaatt 128
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctc 180
|||| |||||||||||||||||||
Sbjct: 143 ctgtacttggactgaagggagctc 166
>44973_miR159:micropc
Length = 190
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 157 ctgtgcttggactgaagggagctc 180
|||| |||||||||||||||||||
Sbjct: 167 ctgtacttggactgaagggagctc 190
