miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46829_miR159:micropc
Length = 173
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 93
Query: 61 tggtagtcttgtggcttccatatctggggagcttcatttgcct 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 tggtagtcttgtggcttccatatctggggagcttcatttgcct 136
>45771_miR159:micropc
Length = 171
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 92
Query: 61 tggtagtcttgtggcttccatatctggggagcttcatttgcct 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 tggtagtcttgtggcttccatatctggggagcttcatttgcct 135
>45395_miR159:micropc
Length = 173
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 93
Query: 61 tggtagtcttgtggcttccatatctggggagcttcatttgcct 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 tggtagtcttgtggcttccatatctggggagcttcatttgcct 136
>45281_miR319:micropc
Length = 171
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 92
Query: 61 tggtagtcttgtggcttccatatctggggagcttcatttgcct 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 tggtagtcttgtggcttccatatctggggagcttcatttgcct 135
>44997_miR159:micropc
Length = 175
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 94
Query: 61 tggtagtcttgtggcttccatatctggggagcttcatttgcct 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tggtagtcttgtggcttccatatctggggagcttcatttgcct 137
>44961_miR159:micropc
Length = 175
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 94
Query: 61 tggtagtcttgtggcttccatatctggggagcttcatttgcct 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 tggtagtcttgtggcttccatatctggggagcttcatttgcct 137
>46827_miR159:micropc
Length = 173
Score = 65.9 bits (33), Expect = 5e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagttctacccat 45
||||| ||||||||||| |||||||||||||||||| ||||||||
Sbjct: 34 gggtggattgagctgctaagctatggatcccacagtactacccat 78
>46727_miR319:micropc
Length = 171
Score = 65.9 bits (33), Expect = 5e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagttctacccat 45
||||| ||||||||||| |||||||||||||||||| ||||||||
Sbjct: 33 gggtggattgagctgctaagctatggatcccacagtactacccat 77
>45624_miR159:micropc
Length = 175
Score = 65.9 bits (33), Expect = 5e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagttctacccat 45
||||| ||||||||||| |||||||||||||||||| ||||||||
Sbjct: 35 gggtggattgagctgctaagctatggatcccacagtactacccat 79
>45397_miR159:micropc
Length = 173
Score = 65.9 bits (33), Expect = 5e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagttctacccat 45
||||| ||||||||||| |||||||||||||||||| ||||||||
Sbjct: 34 gggtggattgagctgctaagctatggatcccacagtactacccat 78
>45036_miR319:micropc
Length = 171
Score = 65.9 bits (33), Expect = 5e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagttctacccat 45
||||| ||||||||||| |||||||||||||||||| ||||||||
Sbjct: 33 gggtggattgagctgctaagctatggatcccacagtactacccat 77
>44848_miR159:micropc
Length = 175
Score = 65.9 bits (33), Expect = 5e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagttctacccat 45
||||| ||||||||||| |||||||||||||||||| ||||||||
Sbjct: 35 gggtggattgagctgctaagctatggatcccacagtactacccat 79
>46819_miR159:micropc
Length = 195
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagt 36
|||| |||||||||||| ||||||||||||||||||
Sbjct: 36 gggtaaattgagctgctgagctatggatcccacagt 71
>46451_miR159:micropc
Length = 195
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagt 36
|||| |||||||||||| ||||||||||||||||||
Sbjct: 36 gggtaaattgagctgctgagctatggatcccacagt 71
>46383_miR159:micropc
Length = 168
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 57 tttgtggtagtcttgtggcttccatatctggggagc 92
||||||||||| ||||||||||||||||| ||||||
Sbjct: 87 tttgtggtagttttgtggcttccatatctagggagc 122
>46233_miR319:micropc
Length = 164
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 57 tttgtggtagtcttgtggcttccatatctggggagc 92
||||||||||| ||||||||||||||||| ||||||
Sbjct: 85 tttgtggtagttttgtggcttccatatctagggagc 120
>46224_miR159:micropc
Length = 193
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagt 36
|||| |||||||||||| ||||||||||||||||||
Sbjct: 35 gggtaaattgagctgctgagctatggatcccacagt 70
>46165_miR319:micropc
Length = 188
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagt 36
|||| |||||||||||| ||||||||||||||||||
Sbjct: 34 gggtaaattgagctgctgagctatggatcccacagt 69
>46029_miR159:micropc
Length = 188
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagt 36
|||| |||||||||||| ||||||||||||||||||
Sbjct: 34 gggtaaattgagctgctgagctatggatcccacagt 69
>45919_miR159:micropc
Length = 193
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagt 36
|||| |||||||||||| ||||||||||||||||||
Sbjct: 35 gggtaaattgagctgctgagctatggatcccacagt 70
>45890_miR159:micropc
Length = 192
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagt 36
|||| |||||||||||| ||||||||||||||||||
Sbjct: 36 gggtaaattgagctgctgagctatggatcccacagt 71
>45869_miR319:micropc
Length = 188
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagt 36
|||| |||||||||||| ||||||||||||||||||
Sbjct: 34 gggtaaattgagctgctgagctatggatcccacagt 69
>45690_miR319:micropc
Length = 188
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagt 36
|||| |||||||||||| ||||||||||||||||||
Sbjct: 34 gggtaaattgagctgctgagctatggatcccacagt 69
>45673_miR159:micropc
Length = 168
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 57 tttgtggtagtcttgtggcttccatatctggggagc 92
||||||||||| ||||||||||||||||| ||||||
Sbjct: 87 tttgtggtagttttgtggcttccatatctagggagc 122
>45638_miR159:micropc
Length = 166
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 57 tttgtggtagtcttgtggcttccatatctggggagc 92
||||||||||| ||||||||||||||||| ||||||
Sbjct: 86 tttgtggtagttttgtggcttccatatctagggagc 121
>45534_miR159:micropc
Length = 192
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagt 36
|||| |||||||||||| ||||||||||||||||||
Sbjct: 36 gggtaaattgagctgctgagctatggatcccacagt 71
>45402_miR319:micropc
Length = 188
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagt 36
|||| |||||||||||| ||||||||||||||||||
Sbjct: 34 gggtaaattgagctgctgagctatggatcccacagt 69
>45400_miR159:micropc
Length = 190
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagt 36
|||| |||||||||||| ||||||||||||||||||
Sbjct: 35 gggtaaattgagctgctgagctatggatcccacagt 70
>45375_miR159:micropc
Length = 188
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagt 36
|||| |||||||||||| ||||||||||||||||||
Sbjct: 34 gggtaaattgagctgctgagctatggatcccacagt 69
>45368_miR319:micropc
Length = 164
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 57 tttgtggtagtcttgtggcttccatatctggggagc 92
||||||||||| ||||||||||||||||| ||||||
Sbjct: 85 tttgtggtagttttgtggcttccatatctagggagc 120
>45277_miR159:micropc
Length = 166
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 57 tttgtggtagtcttgtggcttccatatctggggagc 92
||||||||||| ||||||||||||||||| ||||||
Sbjct: 86 tttgtggtagttttgtggcttccatatctagggagc 121
>45210_miR159:micropc
Length = 193
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagt 36
|||| |||||||||||| ||||||||||||||||||
Sbjct: 35 gggtaaattgagctgctgagctatggatcccacagt 70
>45169_miR159:micropc
Length = 195
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagt 36
|||| |||||||||||| ||||||||||||||||||
Sbjct: 36 gggtaaattgagctgctgagctatggatcccacagt 71
>45019_miR159:micropc
Length = 190
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagt 36
|||| |||||||||||| ||||||||||||||||||
Sbjct: 35 gggtaaattgagctgctgagctatggatcccacagt 70
>44909_miR159:micropc
Length = 193
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagt 36
|||| |||||||||||| ||||||||||||||||||
Sbjct: 35 gggtaaattgagctgctgagctatggatcccacagt 70
>44896_miR159:micropc
Length = 195
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatcccacagt 36
|||| |||||||||||| ||||||||||||||||||
Sbjct: 36 gggtaaattgagctgctgagctatggatcccacagt 71
>46712_miR159:micropc
Length = 179
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 attgagctgcttagctatggatcccacag 35
||||||||||| |||||||||||||||||
Sbjct: 40 attgagctgctgagctatggatcccacag 68
>46649_miR159:micropc
Length = 170
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 attgagctgcttagctatggatcccacag 35
||||||||||| |||||||||||||||||
Sbjct: 40 attgagctgctgagctatggatcccacag 68
>46577_miR319:micropc
Length = 177
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 attgagctgcttagctatggatcccacag 35
||||||||||| |||||||||||||||||
Sbjct: 39 attgagctgctgagctatggatcccacag 67
>46534_miR159:micropc
Length = 172
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 attgagctgcttagctatggatcccacag 35
||||||||||| |||||||||||||||||
Sbjct: 41 attgagctgctgagctatggatcccacag 69
>45627_miR159:micropc
Length = 181
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 attgagctgcttagctatggatcccacag 35
||||||||||| |||||||||||||||||
Sbjct: 41 attgagctgctgagctatggatcccacag 69
>45296_miR159:micropc
Length = 170
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 attgagctgcttagctatggatcccacag 35
||||||||||| |||||||||||||||||
Sbjct: 40 attgagctgctgagctatggatcccacag 68
>45248_miR159:micropc
Length = 172
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 attgagctgcttagctatggatcccacag 35
||||||||||| |||||||||||||||||
Sbjct: 41 attgagctgctgagctatggatcccacag 69
>45202_miR159:micropc
Length = 181
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 attgagctgcttagctatggatcccacag 35
||||||||||| |||||||||||||||||
Sbjct: 41 attgagctgctgagctatggatcccacag 69
>45201_miR319:micropc
Length = 177
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 attgagctgcttagctatggatcccacag 35
||||||||||| |||||||||||||||||
Sbjct: 39 attgagctgctgagctatggatcccacag 67
>45002_miR159:micropc
Length = 179
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 attgagctgcttagctatggatcccacag 35
||||||||||| |||||||||||||||||
Sbjct: 40 attgagctgctgagctatggatcccacag 68
>44933_miR319:micropc
Length = 168
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 attgagctgcttagctatggatcccacag 35
||||||||||| |||||||||||||||||
Sbjct: 39 attgagctgctgagctatggatcccacag 67
>44913_miR319:micropc
Length = 168
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 attgagctgcttagctatggatcccacag 35
||||||||||| |||||||||||||||||
Sbjct: 39 attgagctgctgagctatggatcccacag 67
>46568_miR319:micropc
Length = 190
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 7 attgagctgcttagctatggatcccacag 35
||||||||||| |||||||||| ||||||
Sbjct: 39 attgagctgctgagctatggataccacag 67
>46317_miR319:micropc
Length = 190
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 7 attgagctgcttagctatggatcccacag 35
||||||||||| |||||||||| ||||||
Sbjct: 39 attgagctgctgagctatggataccacag 67
>45831_miR159:micropc
Length = 194
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 7 attgagctgcttagctatggatcccacag 35
||||||||||| |||||||||| ||||||
Sbjct: 41 attgagctgctgagctatggataccacag 69
>45816_miR159:micropc
Length = 192
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 7 attgagctgcttagctatggatcccacag 35
||||||||||| |||||||||| ||||||
Sbjct: 40 attgagctgctgagctatggataccacag 68
>45505_miR159:micropc
Length = 192
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 7 attgagctgcttagctatggatcccacag 35
||||||||||| |||||||||| ||||||
Sbjct: 40 attgagctgctgagctatggataccacag 68
>45074_miR159:micropc
Length = 194
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 7 attgagctgcttagctatggatcccacag 35
||||||||||| |||||||||| ||||||
Sbjct: 41 attgagctgctgagctatggataccacag 69
>45805_miR159:micropc
Length = 193
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatccca 32
||||| || |||||||| ||||||||||||||
Sbjct: 34 gggtggatagagctgctgagctatggatccca 65
>45714_miR159:micropc
Length = 195
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatccca 32
||||| || |||||||| ||||||||||||||
Sbjct: 35 gggtggatagagctgctgagctatggatccca 66
>45420_miR319:micropc
Length = 191
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatccca 32
||||| || |||||||| ||||||||||||||
Sbjct: 33 gggtggatagagctgctgagctatggatccca 64
>45357_miR159:micropc
Length = 193
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatccca 32
||||| || |||||||| ||||||||||||||
Sbjct: 34 gggtggatagagctgctgagctatggatccca 65
>45132_miR319:micropc
Length = 191
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatccca 32
||||| || |||||||| ||||||||||||||
Sbjct: 33 gggtggatagagctgctgagctatggatccca 64
>45097_miR159:micropc
Length = 195
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 1 gggtgaattgagctgcttagctatggatccca 32
||||| || |||||||| ||||||||||||||
Sbjct: 35 gggtggatagagctgctgagctatggatccca 66
