miRNEST 2.0, an integrative microRNA resource :: BLAST
>46562_miR390:micropc
Length = 96
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccatggatgatc 41
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Sbjct: 1 aagctcaggagggatagcgccatggatgatc 31
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 67 gcgctatccatcctgagttt 86
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Sbjct: 77 gcgctatccatcctgagttt 96
>45779_miR390:micropc
Length = 96
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccatggatgatc 41
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Sbjct: 1 aagctcaggagggatagcgccatggatgatc 31
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 67 gcgctatccatcctgagttt 86
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Sbjct: 77 gcgctatccatcctgagttt 96
>45362_miR390:micropc
Length = 97
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccatggatgatc 41
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Sbjct: 1 aagctcaggagggatagcgccatggatgatc 31
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 gcgctatccatcctgagtttc 87
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Sbjct: 77 gcgctatccatcctgagtttc 97
>45647_miR390:micropc
Length = 94
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 12 agctcaggagggatagcgccatggatgatc 41
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Sbjct: 1 agctcaggagggatagcgccatggatgatc 30
>45123_miR390:micropc
Length = 72
Score = 58.0 bits (29), Expect = 1e-09
Identities = 65/77 (84%), Gaps = 5/77 (6%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccatggatgatcttctcttcactcttgatcttctcttgcgc 70
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Sbjct: 1 aagctcaggagggatagcgccatggcgggtcttg-----aatcttgatcttcatttgcgc 55
Query: 71 tatccatcctgagtttc 87
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Sbjct: 56 tatccatcctgagtttc 72
>46339_miR390:micropc
Length = 71
Score = 56.0 bits (28), Expect = 5e-09
Identities = 64/76 (84%), Gaps = 5/76 (6%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccatggatgatcttctcttcactcttgatcttctcttgcgc 70
||||||||||||||||||||||||| | |||| | ||||||||||| ||||||
Sbjct: 1 aagctcaggagggatagcgccatggcgggtcttg-----aatcttgatcttcatttgcgc 55
Query: 71 tatccatcctgagttt 86
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Sbjct: 56 tatccatcctgagttt 71
>45682_miR390:micropc
Length = 71
Score = 56.0 bits (28), Expect = 5e-09
Identities = 64/76 (84%), Gaps = 5/76 (6%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccatggatgatcttctcttcactcttgatcttctcttgcgc 70
||||||||||||||||||||||||| | |||| | ||||||||||| ||||||
Sbjct: 1 aagctcaggagggatagcgccatggcgggtcttg-----aatcttgatcttcatttgcgc 55
Query: 71 tatccatcctgagttt 86
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Sbjct: 56 tatccatcctgagttt 71
>45151_miR390:micropc
Length = 69
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 52 tcttgatcttctcttgcgctatccatcctgagtt 85
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Sbjct: 36 tcttgatcttcatttgcgctatccatcctgagtt 69
>46582_miR390:micropc
Length = 72
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccatgg 35
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Sbjct: 1 aagctcaggagggatagcgccatgg 25
>46099_miR390:micropc
Length = 97
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccatgg 35
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Sbjct: 1 aagctcaggagggatagcgccatgg 25
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 67 gcgctatccatcctgagttt 86
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Sbjct: 78 gcgctatccatcctgagttt 97
>45789_miR390:micropc
Length = 97
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccatgg 35
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Sbjct: 1 aagctcaggagggatagcgccatgg 25
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 67 gcgctatccatcctgagttt 86
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Sbjct: 78 gcgctatccatcctgagttt 97
>44966_miR390:micropc
Length = 98
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccatgg 35
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Sbjct: 1 aagctcaggagggatagcgccatgg 25
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 gcgctatccatcctgagtttc 87
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Sbjct: 78 gcgctatccatcctgagtttc 98
>46796_miR390:micropc
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 agctcaggagggatagcgccatgg 35
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Sbjct: 1 agctcaggagggatagcgccatgg 24
>45612_miR390:micropc
Length = 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 65 ttgcgctatccatcctgagtttc 87
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Sbjct: 66 ttgcgctatccatcctgagtttc 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccatgga 36
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Sbjct: 1 aagctcaggagggatagcaccatgga 26
>44796_miR390:micropc
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccatgga 36
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Sbjct: 1 aagctcaggagggatagcaccatgga 26
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 65 ttgcgctatccatcctgagttt 86
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Sbjct: 66 ttgcgctatccatcctgagttt 87
>45827_miR390:micropc
Length = 55
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgcc 31
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Sbjct: 1 aagctcaggagggatagcgcc 21
>45719_miR390:micropc
Length = 55
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgcc 31
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Sbjct: 1 aagctcaggagggatagcgcc 21
>45763_miR390:micropc
Length = 54
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 12 agctcaggagggatagcgcc 31
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Sbjct: 1 agctcaggagggatagcgcc 20
>45599_miR390:micropc
Length = 68
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccatg 34
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Sbjct: 1 aagctcaggagggatagcaccatg 24
>45502_miR390:micropc
Length = 68
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccatg 34
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Sbjct: 1 aagctcaggagggatagcaccatg 24
>45082_miR390:micropc
Length = 68
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 aagctcaggagggatagcgccatg 34
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Sbjct: 1 aagctcaggagggatagcaccatg 24
