miRNEST 2.0, an integrative microRNA resource :: BLAST
>45545_miR162:micropc
Length = 91
Score = 165 bits (83), Expect = 1e-41
Identities = 89/91 (97%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaataacacaaata 80
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaata 60
Query: 81 catgattcgatcgataaacctctgcatccag 111
||||| |||||||||||||||||||||||||
Sbjct: 61 catgaatcgatcgataaacctctgcatccag 91
>46511_miR162:micropc
Length = 89
Score = 161 bits (81), Expect = 2e-40
Identities = 87/89 (97%)
Strand = Plus / Plus
Query: 22 tggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaataacacaaatac 81
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataacacaaatac 60
Query: 82 atgattcgatcgataaacctctgcatcca 110
|||| ||||||||||||||||||||||||
Sbjct: 61 atgaatcgatcgataaacctctgcatcca 89
>46039_miR162:micropc
Length = 92
Score = 119 bits (60), Expect = 5e-28
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctgg-gaattttgttgtgagaataacacaaat 79
|||||||||||||||||||||||||||||||| | |||||||||||| | || ||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctggaggattttgttgtgaaattagcacaaac 60
Query: 80 acatgattcgatcgataaacctctgcatccag 111
|||||| |||||||||||||||||||||||||
Sbjct: 61 acatgaatcgatcgataaacctctgcatccag 92
>46504_miR162:micropc
Length = 90
Score = 115 bits (58), Expect = 8e-27
Identities = 83/90 (92%), Gaps = 1/90 (1%)
Strand = Plus / Plus
Query: 22 tggaggcagcggttcatcgatctcttcctgg-gaattttgttgtgagaataacacaaata 80
||||||||||||||||||||||||||||||| | |||||||||||| | || |||||| |
Sbjct: 1 tggaggcagcggttcatcgatctcttcctggaggattttgttgtgaaattagcacaaaca 60
Query: 81 catgattcgatcgataaacctctgcatcca 110
||||| ||||||||||||||||||||||||
Sbjct: 61 catgaatcgatcgataaacctctgcatcca 90
>46817_miR162:micropc
Length = 93
Score = 97.6 bits (49), Expect = 2e-21
Identities = 84/93 (90%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaa-taacacaaa- 78
||||||||||||||||||||||| ||| || ||||||||||||| || |||||||||
Sbjct: 1 ctggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaaaa 60
Query: 79 tacatgattcgatcgataaacctctgcatccag 111
||||||| |||||||||||||||||||||||||
Sbjct: 61 tacatgaatcgatcgataaacctctgcatccag 93
>46597_miR162:micropc
Length = 91
Score = 93.7 bits (47), Expect = 3e-20
Identities = 82/91 (90%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 22 tggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaa-taacacaaa-t 79
|||||||||||||||||||||| ||| || ||||||||||||| || ||||||||| |
Sbjct: 1 tggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaaaat 60
Query: 80 acatgattcgatcgataaacctctgcatcca 110
|||||| ||||||||||||||||||||||||
Sbjct: 61 acatgaatcgatcgataaacctctgcatcca 91
>46096_miR162:micropc
Length = 87
Score = 71.9 bits (36), Expect = 1e-13
Identities = 80/91 (87%), Gaps = 4/91 (4%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaataacacaaata 80
||||||||||||||||||||||||||||||| ||||| | |||| ||| ||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctg--aatttggctgtg-gaagaacacaaag- 56
Query: 81 catgattcgatcgataaacctctgcatccag 111
|| || ||| |||||||||||||||||||||
Sbjct: 57 caagaatcggtcgataaacctctgcatccag 87
>46549_miR162:micropc
Length = 92
Score = 67.9 bits (34), Expect = 2e-12
Identities = 80/93 (86%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctgggaa--ttttgttgtgagaataacacaaa 78
|||||||||||||||||||||||||||||||| | ||||||| ||| | | | |||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctggagattttttgttctga-actgcaataaa 59
Query: 79 tacatgattcgatcgataaacctctgcatccag 111
|||||| |||||||||||||||||||||||||
Sbjct: 60 cacatgaatcgatcgataaacctctgcatccag 92
>44920_miR162:micropc
Length = 85
Score = 67.9 bits (34), Expect = 2e-12
Identities = 78/89 (87%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 22 tggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaataacacaaatac 81
|||||||||||||||||||||||||||||| ||||| | |||| ||| |||||||| |
Sbjct: 1 tggaggcagcggttcatcgatctcttcctg--aatttggctgtg-gaagaacacaaag-c 56
Query: 82 atgattcgatcgataaacctctgcatcca 110
| || ||| ||||||||||||||||||||
Sbjct: 57 aagaatcggtcgataaacctctgcatcca 85
>45921_miR162:micropc
Length = 110
Score = 63.9 bits (32), Expect = 3e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctgggaattttgttgt 64
||||||||||||||||||||||||||||||| | ||||| ||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctgtggatttttttgt 44
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 89 gatcgataaacctctgcatccag 111
|||||||||||||||||||||||
Sbjct: 88 gatcgataaacctctgcatccag 110
>45903_miR162:micropc
Length = 90
Score = 63.9 bits (32), Expect = 3e-11
Identities = 78/91 (85%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 22 tggaggcagcggttcatcgatctcttcctgggaa--ttttgttgtgagaataacacaaat 79
||||||||||||||||||||||||||||||| | ||||||| ||| | | | |||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctggagattttttgttctga-actgcaataaac 59
Query: 80 acatgattcgatcgataaacctctgcatcca 110
|||||| ||||||||||||||||||||||||
Sbjct: 60 acatgaatcgatcgataaacctctgcatcca 90
>45617_miR162:micropc
Length = 88
Score = 61.9 bits (31), Expect = 1e-10
Identities = 79/91 (86%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaataacacaaata 80
|||||||||||||||||||||||| || || || |||||||||||| | ||||| | |
Sbjct: 1 ctggaggcagcggttcatcgatctgtttatgaga-ttttgttgtgagta-aacac-agtt 57
Query: 81 catgattcgatcgataaacctctgcatccag 111
||||| ||| |||||||||||||||||||||
Sbjct: 58 catgaatcggtcgataaacctctgcatccag 88
>45508_miR162:micropc
Length = 108
Score = 61.9 bits (31), Expect = 1e-10
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 22 tggaggcagcggttcatcgatctcttcctgggaattttgttgt 64
|||||||||||||||||||||||||||||| | ||||| ||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctgtggatttttttgt 43
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 89 gatcgataaacctctgcatcca 110
||||||||||||||||||||||
Sbjct: 87 gatcgataaacctctgcatcca 108
>46456_miR162:micropc
Length = 89
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 23 ggaggcagcggttcatcgatctcttcctgg 52
||||||||||||||||||||||||||||||
Sbjct: 4 ggaggcagcggttcatcgatctcttcctgg 33
>45283_miR162:micropc
Length = 87
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 23 ggaggcagcggttcatcgatctcttcctgg 52
||||||||||||||||||||||||||||||
Sbjct: 3 ggaggcagcggttcatcgatctcttcctgg 32
>45757_miR162:micropc
Length = 86
Score = 58.0 bits (29), Expect = 2e-09
Identities = 77/89 (86%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 22 tggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaataacacaaatac 81
||||||||||||||||||||||| || || || |||||||||||| | ||||| | | |
Sbjct: 1 tggaggcagcggttcatcgatctgtttatgaga-ttttgttgtgagta-aacac-agttc 57
Query: 82 atgattcgatcgataaacctctgcatcca 110
|||| ||| ||||||||||||||||||||
Sbjct: 58 atgaatcggtcgataaacctctgcatcca 86
>46676_miR162:micropc
Length = 97
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 81 catgattcgatcgataaacctctgcatccag 111
||||| |||||||||||||||||||||||||
Sbjct: 67 catgaatcgatcgataaacctctgcatccag 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatc 43
|||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatc 23
>44984_miR162:micropc
Length = 85
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctg 51
||||| |||||||||||||||||||||||||
Sbjct: 1 ctggatgcagcggttcatcgatctcttcctg 31
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 91 tcgataaacctctgcatccag 111
|||||||||||||||||||||
Sbjct: 65 tcgataaacctctgcatccag 85
>44934_miR162:micropc
Length = 97
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 81 catgattcgatcgataaacctctgcatccag 111
||||| |||||||||||||||||||||||||
Sbjct: 67 catgaatcgatcgataaacctctgcatccag 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatc 43
|||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatc 23
>46792_miR162:micropc
Length = 83
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 22 tggaggcagcggttcatcgatctcttcctg 51
|||| |||||||||||||||||||||||||
Sbjct: 1 tggatgcagcggttcatcgatctcttcctg 30
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 tcgataaacctctgcatcca 110
||||||||||||||||||||
Sbjct: 64 tcgataaacctctgcatcca 83
>46394_miR162:micropc
Length = 95
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 81 catgattcgatcgataaacctctgcatcca 110
||||| ||||||||||||||||||||||||
Sbjct: 66 catgaatcgatcgataaacctctgcatcca 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tggaggcagcggttcatcgatc 43
||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatc 22
>46364_miR162:micropc
Length = 95
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 81 catgattcgatcgataaacctctgcatcca 110
||||| ||||||||||||||||||||||||
Sbjct: 66 catgaatcgatcgataaacctctgcatcca 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tggaggcagcggttcatcgatc 43
||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatc 22
>45991_miR162:micropc
Length = 108
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcgatcgataaacctctgcatccag 111
|||||||||||||||||||||||||
Sbjct: 84 tcgatcgataaacctctgcatccag 108
>45901_miR162:micropc
Length = 111
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcgatcgataaacctctgcatccag 111
|||||||||||||||||||||||||
Sbjct: 87 tcgatcgataaacctctgcatccag 111
>45749_miR162:micropc
Length = 99
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcgatcgataaacctctgcatccag 111
|||||||||||||||||||||||||
Sbjct: 75 tcgatcgataaacctctgcatccag 99
>46457_miR162:micropc
Length = 109
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 tcgatcgataaacctctgcatcca 110
||||||||||||||||||||||||
Sbjct: 86 tcgatcgataaacctctgcatcca 109
>46090_miR162:micropc
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 tcgatcgataaacctctgcatcca 110
||||||||||||||||||||||||
Sbjct: 74 tcgatcgataaacctctgcatcca 97
>46026_miR162:micropc
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 80 acatgattcgatcgataaacctctgcatccag 111
|||||| ||| |||||||||||||||||||||
Sbjct: 56 acatgaatcggtcgataaacctctgcatccag 87
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctg 51
||||| |||||||||||||||||| ||||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcctg 31
>44845_miR162:micropc
Length = 106
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 87 tcgatcgataaacctctgcatcca 110
||||||||||||||||||||||||
Sbjct: 83 tcgatcgataaacctctgcatcca 106
>46557_miR162:micropc
Length = 85
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 80 acatgattcgatcgataaacctctgcatcca 110
|||||| ||| ||||||||||||||||||||
Sbjct: 55 acatgaatcggtcgataaacctctgcatcca 85
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 22 tggaggcagcggttcatcgatctcttcctg 51
|||| |||||||||||||||||| ||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcctg 30
>46628_miR162:micropc
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcc 49
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 91 tcgataaacctctgcatccag 111
|||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatccag 136
>46169_miR162:micropc
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcc 49
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 91 tcgataaacctctgcatccag 111
|||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatccag 136
>45279_miR162:micropc
Length = 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 87 tcgatcgataaacctctgcatccag 111
||||||||||| |||||||||||||
Sbjct: 90 tcgatcgataagcctctgcatccag 114
>45084_miR162:micropc
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcc 49
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 91 tcgataaacctctgcatccag 111
|||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatccag 136
>44890_miR162:micropc
Length = 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcc 49
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 91 tcgataaacctctgcatccag 111
|||||||||||||||||||||
Sbjct: 121 tcgataaacctctgcatccag 141
>44807_miR162:micropc
Length = 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcc 49
||||| |||||||||||||||||| ||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcc 29
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 91 tcgataaacctctgcatccag 111
|||||||||||||||||||||
Sbjct: 121 tcgataaacctctgcatccag 141
>46470_miR162:micropc
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 22 tggaggcagcggttcatcgatctcttcc 49
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 tcgataaacctctgcatcca 110
||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatcca 135
>45868_miR162:micropc
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 22 tggaggcagcggttcatcgatctcttcc 49
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 tcgataaacctctgcatcca 110
||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatcca 135
>45605_miR162:micropc
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 22 tggaggcagcggttcatcgatctcttcc 49
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 tcgataaacctctgcatcca 110
||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatcca 135
>45416_miR162:micropc
Length = 139
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 22 tggaggcagcggttcatcgatctcttcc 49
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 tcgataaacctctgcatcca 110
||||||||||||||||||||
Sbjct: 120 tcgataaacctctgcatcca 139
>45338_miR162:micropc
Length = 112
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 87 tcgatcgataaacctctgcatcca 110
||||||||||| ||||||||||||
Sbjct: 89 tcgatcgataagcctctgcatcca 112
>45197_miR162:micropc
Length = 139
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 22 tggaggcagcggttcatcgatctcttcc 49
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 91 tcgataaacctctgcatcca 110
||||||||||||||||||||
Sbjct: 120 tcgataaacctctgcatcca 139
