miRNEST 2.0, an integrative microRNA resource :: BLAST
>46562_miR390:micropc
Length = 96
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgccattgatgatc 51
||||||||||||||||||||||| |||||||
Sbjct: 1 aagctcaggagggatagcgccatggatgatc 31
Score = 50.1 bits (25), Expect = 4e-07
Identities = 32/33 (96%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 76 tgatcctcat-tagcgctatccatcctgagttt 107
|||||||||| ||||||||||||||||||||||
Sbjct: 64 tgatcctcatatagcgctatccatcctgagttt 96
>45779_miR390:micropc
Length = 96
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgccattgatgatc 51
||||||||||||||||||||||| |||||||
Sbjct: 1 aagctcaggagggatagcgccatggatgatc 31
Score = 50.1 bits (25), Expect = 4e-07
Identities = 32/33 (96%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 76 tgatcctcat-tagcgctatccatcctgagttt 107
|||||||||| ||||||||||||||||||||||
Sbjct: 64 tgatcctcatatagcgctatccatcctgagttt 96
>45362_miR390:micropc
Length = 97
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgccattgatgatc 51
||||||||||||||||||||||| |||||||
Sbjct: 1 aagctcaggagggatagcgccatggatgatc 31
Score = 52.0 bits (26), Expect = 1e-07
Identities = 33/34 (97%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 76 tgatcctcat-tagcgctatccatcctgagtttc 108
|||||||||| |||||||||||||||||||||||
Sbjct: 64 tgatcctcatatagcgctatccatcctgagtttc 97
>45647_miR390:micropc
Length = 94
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 22 agctcaggagggatagcgccattgatgatc 51
|||||||||||||||||||||| |||||||
Sbjct: 1 agctcaggagggatagcgccatggatgatc 30
Score = 48.1 bits (24), Expect = 2e-06
Identities = 31/32 (96%), Gaps = 1/32 (3%)
Strand = Plus / Plus
Query: 76 tgatcctcat-tagcgctatccatcctgagtt 106
|||||||||| |||||||||||||||||||||
Sbjct: 63 tgatcctcatatagcgctatccatcctgagtt 94
>45123_miR390:micropc
Length = 72
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 76 tgatcctcattagcgctatccatcctgagtttc 108
||||| ||||| |||||||||||||||||||||
Sbjct: 40 tgatcttcatttgcgctatccatcctgagtttc 72
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgccattgatgatcttgaatctt 60
||||||||||||||||||||||| | | |||||||||||
Sbjct: 1 aagctcaggagggatagcgccatggcgggtcttgaatctt 40
>46582_miR390:micropc
Length = 72
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgccattgatgatcttgaatctt 60
||||||||||||||||||||||| | | |||||||||||
Sbjct: 1 aagctcaggagggatagcgccatggcgggtcttgaatctt 40
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 76 tgatcctcattagcgctatccatcctgagtttc 108
||||| ||||| ||||||||| |||||||||||
Sbjct: 40 tgatcttcatttgcgctatccctcctgagtttc 72
>46339_miR390:micropc
Length = 71
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgccattgatgatcttgaatctt 60
||||||||||||||||||||||| | | |||||||||||
Sbjct: 1 aagctcaggagggatagcgccatggcgggtcttgaatctt 40
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 76 tgatcctcattagcgctatccatcctgagttt 107
||||| ||||| ||||||||||||||||||||
Sbjct: 40 tgatcttcatttgcgctatccatcctgagttt 71
>45682_miR390:micropc
Length = 71
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgccattgatgatcttgaatctt 60
||||||||||||||||||||||| | | |||||||||||
Sbjct: 1 aagctcaggagggatagcgccatggcgggtcttgaatctt 40
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 76 tgatcctcattagcgctatccatcctgagttt 107
||||| ||||| ||||||||||||||||||||
Sbjct: 40 tgatcttcatttgcgctatccatcctgagttt 71
>46099_miR390:micropc
Length = 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgccat 43
|||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgccat 23
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 gcgctatccatcctgagttt 107
||||||||||||||||||||
Sbjct: 78 gcgctatccatcctgagttt 97
>45789_miR390:micropc
Length = 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgccat 43
|||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgccat 23
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 gcgctatccatcctgagttt 107
||||||||||||||||||||
Sbjct: 78 gcgctatccatcctgagttt 97
>45151_miR390:micropc
Length = 69
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 22 agctcaggagggatagcgccattgatgatcttgaatctt 60
|||||||||||||||||||||| | | |||||||||||
Sbjct: 1 agctcaggagggatagcgccatggcgggtcttgaatctt 39
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 76 tgatcctcattagcgctatccatcctgagtt 106
||||| ||||| |||||||||||||||||||
Sbjct: 39 tgatcttcatttgcgctatccatcctgagtt 69
>44966_miR390:micropc
Length = 98
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgccat 43
|||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgccat 23
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 88 gcgctatccatcctgagtttc 108
|||||||||||||||||||||
Sbjct: 78 gcgctatccatcctgagtttc 98
>46796_miR390:micropc
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 agctcaggagggatagcgccat 43
||||||||||||||||||||||
Sbjct: 1 agctcaggagggatagcgccat 22
>45827_miR390:micropc
Length = 55
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgcc 41
|||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgcc 21
>45719_miR390:micropc
Length = 55
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgcc 41
|||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgcc 21
>45612_miR390:micropc
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 88 gcgctatccatcctgagtttc 108
|||||||||||||||||||||
Sbjct: 68 gcgctatccatcctgagtttc 88
>45763_miR390:micropc
Length = 54
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 agctcaggagggatagcgcc 41
||||||||||||||||||||
Sbjct: 1 agctcaggagggatagcgcc 20
>44796_miR390:micropc
Length = 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 88 gcgctatccatcctgagttt 107
||||||||||||||||||||
Sbjct: 68 gcgctatccatcctgagttt 87
