miRNEST 2.0, an integrative microRNA resource :: BLAST
>45593_miR408:micropc
Length = 85
Score = 85.7 bits (43), Expect = 9e-18
Identities = 77/86 (89%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 58 agacggggaacaggcagagcatggatggaaccattaacag--gttctctgttttggctcc 115
||||||||||||||||||||||||||||| | | |||||| || || |||||||||||
Sbjct: 1 agacggggaacaggcagagcatggatggagctactaacagaagtact-tgttttggctct 59
Query: 116 tcccatgcactgcctcttccctggct 141
|||||||||||||||||||||||||
Sbjct: 60 acccatgcactgcctcttccctggct 85
>46505_miR408:micropc
Length = 83
Score = 81.8 bits (41), Expect = 1e-16
Identities = 75/84 (89%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 59 gacggggaacaggcagagcatggatggaaccattaacag--gttctctgttttggctcct 116
|||||||||||||||||||||||||||| | | |||||| || || |||||||||||
Sbjct: 1 gacggggaacaggcagagcatggatggagctactaacagaagtact-tgttttggctcta 59
Query: 117 cccatgcactgcctcttccctggc 140
||||||||||||||||||||||||
Sbjct: 60 cccatgcactgcctcttccctggc 83
>46052_miR408:micropc
Length = 83
Score = 81.8 bits (41), Expect = 1e-16
Identities = 75/84 (89%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 59 gacggggaacaggcagagcatggatggaaccattaacag--gttctctgttttggctcct 116
|||||||||||||||||||||||||||| | | |||||| || || |||||||||||
Sbjct: 1 gacggggaacaggcagagcatggatggagctactaacagaagtact-tgttttggctcta 59
Query: 117 cccatgcactgcctcttccctggc 140
||||||||||||||||||||||||
Sbjct: 60 cccatgcactgcctcttccctggc 83
>45814_miR408:micropc
Length = 85
Score = 77.8 bits (39), Expect = 2e-15
Identities = 76/86 (88%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 58 agacggggaacaggcagagcatggatggaaccattaacag--gttctctgttttggctcc 115
||||||||||||||||||||||||||||| | | |||||| || | |||||||||||
Sbjct: 1 agacggggaacaggcagagcatggatggagctactaacagaagtaca-tgttttggctct 59
Query: 116 tcccatgcactgcctcttccctggct 141
|||||||||||||||||||||||||
Sbjct: 60 acccatgcactgcctcttccctggct 85
>46359_miR408:micropc
Length = 85
Score = 75.8 bits (38), Expect = 8e-15
Identities = 71/81 (87%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 63 gggaacaggcagagcatggatggaaccattaacaggt--tctctgttttggctcctccca 120
|||||||||||||||||||||| | | |||||||| |||||||||||||| | | ||
Sbjct: 5 gggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcactca 64
Query: 121 tgcactgcctcttccctggct 141
|||||||||||||||||||||
Sbjct: 65 tgcactgcctcttccctggct 85
>46401_miR408:micropc
Length = 83
Score = 73.8 bits (37), Expect = 3e-14
Identities = 74/84 (88%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 59 gacggggaacaggcagagcatggatggaaccattaacag--gttctctgttttggctcct 116
|||||||||||||||||||||||||||| | | |||||| || | |||||||||||
Sbjct: 1 gacggggaacaggcagagcatggatggagctactaacagaagtaca-tgttttggctcta 59
Query: 117 cccatgcactgcctcttccctggc 140
||||||||||||||||||||||||
Sbjct: 60 cccatgcactgcctcttccctggc 83
>46309_miR408:micropc
Length = 83
Score = 73.8 bits (37), Expect = 3e-14
Identities = 70/80 (87%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 63 gggaacaggcagagcatggatggaaccattaacaggt--tctctgttttggctcctccca 120
|||||||||||||||||||||| | | |||||||| |||||||||||||| | | ||
Sbjct: 4 gggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcactca 63
Query: 121 tgcactgcctcttccctggc 140
||||||||||||||||||||
Sbjct: 64 tgcactgcctcttccctggc 83
>46155_miR408:micropc
Length = 83
Score = 73.8 bits (37), Expect = 3e-14
Identities = 70/80 (87%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 63 gggaacaggcagagcatggatggaaccattaacaggt--tctctgttttggctcctccca 120
|||||||||||||||||||||| | | |||||||| |||||||||||||| | | ||
Sbjct: 4 gggaacaggcagagcatggatgcagctattaacagaaactctctgttttggcttcactca 63
Query: 121 tgcactgcctcttccctggc 140
||||||||||||||||||||
Sbjct: 64 tgcactgcctcttccctggc 83
>45726_miR408:micropc
Length = 83
Score = 73.8 bits (37), Expect = 3e-14
Identities = 74/84 (88%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 59 gacggggaacaggcagagcatggatggaaccattaacag--gttctctgttttggctcct 116
|||||||||||||||||||||||||||| | | |||||| || | |||||||||||
Sbjct: 1 gacggggaacaggcagagcatggatggagctactaacagaagtaca-tgttttggctcta 59
Query: 117 cccatgcactgcctcttccctggc 140
||||||||||||||||||||||||
Sbjct: 60 cccatgcactgcctcttccctggc 83
>45398_miR408:micropc
Length = 89
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 103 ctgttttggctcctcccatgcactgcctcttccctggct 141
||||| ||||||| | |||||||||||||||||||||||
Sbjct: 51 ctgttgtggctccactcatgcactgcctcttccctggct 89
>45860_miR408:micropc
Length = 87
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 103 ctgttttggctcctcccatgcactgcctcttccctggc 140
||||| ||||||| | ||||||||||||||||||||||
Sbjct: 50 ctgttgtggctccactcatgcactgcctcttccctggc 87
>45090_miR408:micropc
Length = 87
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 103 ctgttttggctcctcccatgcactgcctcttccctggc 140
||||| ||||||| | ||||||||||||||||||||||
Sbjct: 50 ctgttgtggctccactcatgcactgcctcttccctggc 87
>45394_miR408:micropc
Length = 112
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 102 tctgttttggctcctcccatgcactgcctcttccctggct 141
|||||| ||||| | | |||||||||||||||||||||||
Sbjct: 73 tctgttgtggctacgctcatgcactgcctcttccctggct 112
>44861_miR408:micropc
Length = 121
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 102 tctgttttggctcctcccatgcactgcctcttccctggct 141
|||||| ||||| | | |||||||||||||||||||||||
Sbjct: 82 tctgttgtggctacgctcatgcactgcctcttccctggct 121
>45531_miR408:micropc
Length = 89
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 119 catgcactgcctcttccctggct 141
|||||||||||||||||||||||
Sbjct: 67 catgcactgcctcttccctggct 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 58 agacggggaacaggcagagcatggatgga 86
|||| ||||||||| ||||||||||||||
Sbjct: 1 agacagggaacaggtagagcatggatgga 29
>44968_miR408:micropc
Length = 110
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 102 tctgttttggctcctcccatgcactgcctcttccctggc 140
|||||| ||||| | | ||||||||||||||||||||||
Sbjct: 72 tctgttgtggctacgctcatgcactgcctcttccctggc 110
>44821_miR408:micropc
Length = 119
Score = 46.1 bits (23), Expect = 8e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 102 tctgttttggctcctcccatgcactgcctcttccctggc 140
|||||| ||||| | | ||||||||||||||||||||||
Sbjct: 81 tctgttgtggctacgctcatgcactgcctcttccctggc 119
>46728_miR408:micropc
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 119 catgcactgcctcttccctggc 140
||||||||||||||||||||||
Sbjct: 66 catgcactgcctcttccctggc 87
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 63 gggaacaggcagagcatggatgga 86
||||||||| ||||||||||||||
Sbjct: 5 gggaacaggtagagcatggatgga 28
>46159_miR408:micropc
Length = 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 119 catgcactgcctcttccctggc 140
||||||||||||||||||||||
Sbjct: 66 catgcactgcctcttccctggc 87
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 63 gggaacaggcagagcatggatgga 86
||||||||| ||||||||||||||
Sbjct: 5 gggaacaggtagagcatggatgga 28
>45949_miR408:micropc
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 119 catgcactgcctcttccctggc 140
||||||||||||||||||||||
Sbjct: 78 catgcactgcctcttccctggc 99
>45551_miR408:micropc
Length = 99
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 119 catgcactgcctcttccctggc 140
||||||||||||||||||||||
Sbjct: 78 catgcactgcctcttccctggc 99
