miRNEST 2.0, an integrative microRNA resource :: BLAST
>46823_miR171:micropc
Length = 91
Score = 101 bits (51), Expect = 1e-22
Identities = 81/91 (89%)
Strand = Plus / Plus
Query: 8 agcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaata 67
|||||||||||||||||||||||||||||||||||||| | | | | ||||||||
Sbjct: 1 agcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaata 60
Query: 68 cgatctcagattgagccgcgccaatatcact 98
|||||||||||||||||||||||||||||||
Sbjct: 61 cgatctcagattgagccgcgccaatatcact 91
>46414_miR171:micropc
Length = 89
Score = 97.6 bits (49), Expect = 2e-21
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 9 gcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaatac 68
||||||||||||||||||||||||||||||||||||| | | | | |||||||||
Sbjct: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
Query: 69 gatctcagattgagccgcgccaatatcac 97
|||||||||||||||||||||||||||||
Sbjct: 61 gatctcagattgagccgcgccaatatcac 89
>46256_miR171:micropc
Length = 89
Score = 97.6 bits (49), Expect = 2e-21
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 9 gcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaatac 68
||||||||||||||||||||||||||||||||||||| | | | | |||||||||
Sbjct: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
Query: 69 gatctcagattgagccgcgccaatatcac 97
|||||||||||||||||||||||||||||
Sbjct: 61 gatctcagattgagccgcgccaatatcac 89
>44930_miR171:micropc
Length = 86
Score = 91.7 bits (46), Expect = 9e-20
Identities = 76/86 (88%)
Strand = Plus / Plus
Query: 11 gatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaatacga 70
||||||||||||||||||||||||||||||||||| | | | | |||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
Query: 71 tctcagattgagccgcgccaatatca 96
||||||||||||||||||||||||||
Sbjct: 61 tctcagattgagccgcgccaatatca 86
>46236_miR171:micropc
Length = 85
Score = 89.7 bits (45), Expect = 4e-19
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 11 gatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaatacga 70
||||||||||||||||||||||||||||||||||| | | | | |||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
Query: 71 tctcagattgagccgcgccaatatc 95
|||||||||||||||||||||||||
Sbjct: 61 tctcagattgagccgcgccaatatc 85
>45865_miR171:micropc
Length = 85
Score = 89.7 bits (45), Expect = 4e-19
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 11 gatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaatacga 70
||||||||||||||||||||||||||||||||||| | | | | |||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
Query: 71 tctcagattgagccgcgccaatatc 95
|||||||||||||||||||||||||
Sbjct: 61 tctcagattgagccgcgccaatatc 85
>45007_miR171:micropc
Length = 85
Score = 89.7 bits (45), Expect = 4e-19
Identities = 75/85 (88%)
Strand = Plus / Plus
Query: 11 gatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaatacga 70
||||||||||||||||||||||||||||||||||| | | | | |||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
Query: 71 tctcagattgagccgcgccaatatc 95
|||||||||||||||||||||||||
Sbjct: 61 tctcagattgagccgcgccaatatc 85
>46075_miR171:micropc
Length = 83
Score = 85.7 bits (43), Expect = 6e-18
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 12 atgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaatacgat 71
|||||||||||||||||||||||||||||||||| | | | | ||||||||||||
Sbjct: 1 atgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacgat 60
Query: 72 ctcagattgagccgcgccaatat 94
|||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatat 83
>45507_miR171:micropc
Length = 88
Score = 65.9 bits (33), Expect = 5e-12
Identities = 77/91 (84%), Gaps = 3/91 (3%)
Strand = Plus / Plus
Query: 8 agcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattgtaaaata 67
||||||||||||||||||||||||||||||| ||||| | || | ||||| |
Sbjct: 1 agcgatgttggtgaggttcaatccgaagacgagtttacgtttt---gttttcgtaaagaa 57
Query: 68 cgatctcagattgagccgcgccaatatcact 98
|||||||||||||||||||||||||||||||
Sbjct: 58 cgatctcagattgagccgcgccaatatcact 88
>45439_miR171:micropc
Length = 86
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 acgatctcagattgagccgcgccaatatcac 97
|||||||||||||||||||||||||||||||
Sbjct: 56 acgatctcagattgagccgcgccaatatcac 86
>45180_miR171:micropc
Length = 86
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 acgatctcagattgagccgcgccaatatcac 97
|||||||||||||||||||||||||||||||
Sbjct: 56 acgatctcagattgagccgcgccaatatcac 86
>46191_miR171:micropc
Length = 83
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 67 acgatctcagattgagccgcgccaatatca 96
||||||||||||||||||||||||||||||
Sbjct: 54 acgatctcagattgagccgcgccaatatca 83
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 11 gatgttggtgaggttcaatccgaagacg 38
||||||||||||||||||||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacg 28
>45723_miR171:micropc
Length = 82
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 67 acgatctcagattgagccgcgccaatatc 95
|||||||||||||||||||||||||||||
Sbjct: 54 acgatctcagattgagccgcgccaatatc 82
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 11 gatgttggtgaggttcaatccgaagacg 38
||||||||||||||||||||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacg 28
>45597_miR171:micropc
Length = 82
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 67 acgatctcagattgagccgcgccaatatc 95
|||||||||||||||||||||||||||||
Sbjct: 54 acgatctcagattgagccgcgccaatatc 82
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 11 gatgttggtgaggttcaatccgaagacg 38
||||||||||||||||||||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacg 28
>45121_miR171:micropc
Length = 82
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 67 acgatctcagattgagccgcgccaatatc 95
|||||||||||||||||||||||||||||
Sbjct: 54 acgatctcagattgagccgcgccaatatc 82
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 11 gatgttggtgaggttcaatccgaagacg 38
||||||||||||||||||||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacg 28
>46459_miR171:micropc
Length = 80
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 67 acgatctcagattgagccgcgccaatat 94
||||||||||||||||||||||||||||
Sbjct: 53 acgatctcagattgagccgcgccaatat 80
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 12 atgttggtgaggttcaatccgaagacg 38
|||||||||||||||||||||||||||
Sbjct: 1 atgttggtgaggttcaatccgaagacg 27
