miRNEST 2.0, an integrative microRNA resource :: BLAST
>46437_miR1436:micropc
Length = 108
Score = 135 bits (68), Expect = 8e-33
Identities = 98/108 (90%)
Strand = Plus / Plus
Query: 4 acttcctccgttttacaatgtaagactttctagcattgcccacattcattaacatctata 63
|||||||| ||| ||||||||||||||||||||||||| || ||||||||| |||||||
Sbjct: 1 acttcctctatttcacaatgtaagactttctagcattgctcatattcattaatatctata 60
Query: 64 tatatgtgggcaatgctaaaaagtcttacattgtgaaacggagggagt 111
| |||||||||||||||| ||| ||||||||| |||||||||||||||
Sbjct: 61 tgtatgtgggcaatgctagaaaatcttacattatgaaacggagggagt 108
Score = 67.9 bits (34), Expect = 1e-12
Identities = 79/94 (84%)
Strand = Plus / Minus
Query: 8 cctccgttttacaatgtaagactttctagcattgcccacattcattaacatctatatata 67
||||||||| | ||||||||| ||||||||||||||||||| ||| | || | || |
Sbjct: 104 cctccgtttcataatgtaagattttctagcattgcccacatacatatagatattaatgaa 45
Query: 68 tgtgggcaatgctaaaaagtcttacattgtgaaa 101
| || ||||||||| |||||||||||||||||||
Sbjct: 44 tatgagcaatgctagaaagtcttacattgtgaaa 11
>45687_miR819:micropc
Length = 84
Score = 79.8 bits (40), Expect = 4e-16
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 24 taagactttctagcattgcccacattcattaacatctatatatatgtgggcaatgctaaa 83
||||||||||| ||||| | ||||||||||||||| ||||| ||||||||||||||| |
Sbjct: 9 taagactttctggcattactcacattcattaacatatatatgaatgtgggcaatgctaga 68
Query: 84 aagtctta 91
||||||||
Sbjct: 69 aagtctta 76
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 24 taagactttctagcattgcccacattcat 52
|||||||||||||||||||||||||||||
Sbjct: 76 taagactttctagcattgcccacattcat 48
>44978_miR1130:micropc
Length = 144
Score = 73.8 bits (37), Expect = 2e-14
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 47 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 106
|||||||| ||| |||||| |||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 61 attcattagcatatatataaatgtggacaatgctagaaagtcttacattatgaaacggag 2
Query: 107 g 107
|
Sbjct: 1 g 1
Score = 60.0 bits (30), Expect = 4e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 8 cctccgttttacaatgtaagactttctagcattgcccacatt 49
||||||||| | |||||||||||||||||||||| |||||||
Sbjct: 1 cctccgtttcataatgtaagactttctagcattgtccacatt 42
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 75 aatgctaaaaagtcttacattgtgaaacggagg 107
||||||| ||||||||||||| |||||| ||||
Sbjct: 112 aatgctagaaagtcttacattatgaaacagagg 144
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 20 aatgtaagactttctagcatt 40
|||||||||||||||||||||
Sbjct: 132 aatgtaagactttctagcatt 112
>45215_miR1120:micropc
Length = 142
Score = 65.9 bits (33), Expect = 6e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 9 ctccgttttacaatgtaagactttctagcattgcccacattcatt 53
|||||||||| ||||||| ||||||||||||||||||| ||||||
Sbjct: 1 ctccgttttataatgtaaaactttctagcattgcccacgttcatt 45
Score = 56.0 bits (28), Expect = 6e-09
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 47 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 106
|||||||||||||||||| ||| || |||||| || ||| ||||| ||| ||||||||||
Sbjct: 83 attcattaacatctatatgtatatgagcaatgttagaaattcttatattatgaaacggag 142
Score = 48.1 bits (24), Expect = 1e-06
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 47 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 106
|||||||||||| || || | ||||||||||||| ||||| ||||||| | ||||||||
Sbjct: 60 attcattaacatataaatgaacgtgggcaatgctagaaagttttacattataaaacggag 1
>46464_miR1132:micropc
Length = 149
Score = 63.9 bits (32), Expect = 2e-11
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 47 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 106
||||||||| |||||||| || || ||||||||| ||||| ||||||||||||||||||
Sbjct: 63 attcattaatatctatatgaatatgtgcaatgctagaaagtattacattgtgaaacggag 4
Score = 56.0 bits (28), Expect = 6e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 9 ctccgttttacaatgtaagactttctagcattgcccacattcat 52
|||||||| ||||||||| ||||||||||||||| || ||||||
Sbjct: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcat 47
Score = 56.0 bits (28), Expect = 6e-09
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 47 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 106
|||||||||| |||||||| || |||| | ||||| ||| || |||||| ||||||||||
Sbjct: 86 attcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacggag 145
Query: 107 ggag 110
||||
Sbjct: 146 ggag 149
>45514_miR1132:micropc
Length = 149
Score = 63.9 bits (32), Expect = 2e-11
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 47 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 106
||||||||| |||||||| || || ||||||||| ||||| ||||||||||||||||||
Sbjct: 63 attcattaatatctatatgaatatgtgcaatgctagaaagtattacattgtgaaacggag 4
Score = 56.0 bits (28), Expect = 6e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 9 ctccgttttacaatgtaagactttctagcattgcccacattcat 52
|||||||| ||||||||| ||||||||||||||| || ||||||
Sbjct: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcat 47
Score = 56.0 bits (28), Expect = 6e-09
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 47 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 106
|||||||||| |||||||| || |||| | ||||| ||| || |||||| ||||||||||
Sbjct: 86 attcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacggag 145
Query: 107 ggag 110
||||
Sbjct: 146 ggag 149
>45099_miR1132:micropc
Length = 149
Score = 63.9 bits (32), Expect = 2e-11
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 47 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 106
||||||||| |||||||| || || ||||||||| ||||| ||||||||||||||||||
Sbjct: 63 attcattaatatctatatgaatatgtgcaatgctagaaagtattacattgtgaaacggag 4
Score = 56.0 bits (28), Expect = 6e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 9 ctccgttttacaatgtaagactttctagcattgcccacattcat 52
|||||||| ||||||||| ||||||||||||||| || ||||||
Sbjct: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcat 47
Score = 56.0 bits (28), Expect = 6e-09
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 47 attcattaacatctatatatatgtgggcaatgctaaaaagtcttacattgtgaaacggag 106
|||||||||| |||||||| || |||| | ||||| ||| || |||||| ||||||||||
Sbjct: 86 attcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacggag 145
Query: 107 ggag 110
||||
Sbjct: 146 ggag 149
>45603_miR819:micropc
Length = 61
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 24 taagactttctagcattgcccacattcat 52
|||||||||||||||||||||||||||||
Sbjct: 9 taagactttctagcattgcccacattcat 37
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 67 atgtgggcaatgctaaaaagtctta 91
||||||||||||||| |||||||||
Sbjct: 33 atgtgggcaatgctagaaagtctta 9
