miRNEST 2.0, an integrative microRNA resource :: BLAST
>45260_miR819:micropc
Length = 116
Score = 105 bits (53), Expect = 1e-23
Identities = 100/116 (86%)
Strand = Plus / Minus
Query: 24 ttataagactttctatcattgcctacatttatatagatggtagataatttaggcacatat 83
||||||||||||||| || | | | ||||||||||||| || ||| ||| |||||||
Sbjct: 116 ttataagactttctagtatngtccatatttatatagatgttaatgaatatagacacatat 57
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataa 139
|||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 56 atgtttagattcattaacatatatatgaatatggataatgctagaaagtcttataa 1
Score = 58.0 bits (29), Expect = 2e-09
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataa 139
|||| |||||| |||||||||||| ||||| ||| ||| | || ||||||||||||||||
Sbjct: 57 atatgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
>45075_miR819:micropc
Length = 116
Score = 105 bits (53), Expect = 1e-23
Identities = 100/116 (86%)
Strand = Plus / Minus
Query: 24 ttataagactttctatcattgcctacatttatatagatggtagataatttaggcacatat 83
||||||||||||||| || | | | ||||||||||||| || ||| ||| |||||||
Sbjct: 116 ttataagactttctagtatngtccatatttatatagatgttaatgaatatagacacatat 57
Query: 84 atgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataa 139
|||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 56 atgtttagattcattaacatatatatgaatatggataatgctagaaagtcttataa 1
Score = 58.0 bits (29), Expect = 2e-09
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtcttataa 139
|||| |||||| |||||||||||| ||||| ||| ||| | || ||||||||||||||||
Sbjct: 57 atatgtgtctatattcattaacatctatataaatatggacnatactagaaagtcttataa 116
>45687_miR819:micropc
Length = 84
Score = 99.6 bits (50), Expect = 6e-22
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 92 attcattaacatatatatgaatgtgggcaatgctagaaagtcttataata 141
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 attcattaacatatatatgaatgtgggcaatgctagaaagtcttataata 81
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 24 ttataagactttctatcattgcctacatttatata 58
||||||||||||||| ||||||| ||||| |||||
Sbjct: 79 ttataagactttctagcattgcccacattcatata 45
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 108 atgaatgtgggcaatgctagaaagtcttataa 139
||||||||| | ||||| ||||||||||||||
Sbjct: 37 atgaatgtgagtaatgccagaaagtcttataa 6
>46670_miR809:micropc
Length = 97
Score = 81.8 bits (41), Expect = 1e-16
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 77 cacatatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||| ||||||||||||||||||||||||||| |||| |||||
Sbjct: 45 cacatatatgtctacattcattaacatatatatgaatgtgggtaatgttagaa 97
>44980_miR808:micropc
Length = 97
Score = 81.8 bits (41), Expect = 1e-16
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 77 cacatatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
|||||||||||||| ||||||||||||||||||||||||||| |||| |||||
Sbjct: 45 cacatatatgtctacattcattaacatatatatgaatgtgggtaatgttagaa 97
>45215_miR1120:micropc
Length = 142
Score = 77.8 bits (39), Expect = 2e-15
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 82 atatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagt 132
|||| |||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 70 atatatctagattcattaacatataaatgaacgtgggcaatgctagaaagt 20
Score = 46.1 bits (23), Expect = 8e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 92 attcattaacatatatatgaatgtgggcaatgctagaaagtcttata 138
|||||||||||| |||||| || || |||||| |||||| |||||||
Sbjct: 83 attcattaacatctatatgtatatgagcaatgttagaaattcttata 129
>44978_miR1130:micropc
Length = 144
Score = 71.9 bits (36), Expect = 1e-13
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 89 tagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||||| ||||||||| ||||||| ||||||||||||||||||
Sbjct: 64 tagattcattagcatatatataaatgtggacaatgctagaaagtctta 17
Score = 58.0 bits (29), Expect = 2e-09
Identities = 92/112 (82%), Gaps = 2/112 (1%)
Strand = Plus / Plus
Query: 27 taagactttctatcattgcctacatttatatagatggtagataatttagg--cacatata 84
|||||||||||| ||||| | ||||||||||| ||| || ||| || | ||||||||
Sbjct: 17 taagactttctagcattgtccacatttatatatatgctaatgaatctaagcacacatata 76
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||| |||||| ||| |||| ||||||||| || |||||||||||||||||
Sbjct: 77 tgtttagatttattgacatctatatgaatacaggtaatgctagaaagtctta 128
>45603_miR819:micropc
Length = 61
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 106 atatgaatgtgggcaatgctagaaagtcttataa 139
||||||||||||||||||||||||||||||||||
Sbjct: 39 atatgaatgtgggcaatgctagaaagtcttataa 6
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 19 tcaggttataagactttctatcattgcctacatttatat 57
|||||||||||||||||||| ||||||| ||||| ||||
Sbjct: 1 tcaggttataagactttctagcattgcccacattcatat 39
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 19 tcaggttataagactttcta 38
||||||||||||||||||||
Sbjct: 61 tcaggttataagactttcta 42
>46464_miR1132:micropc
Length = 149
Score = 65.9 bits (33), Expect = 9e-12
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagt 132
||||||| ||||||||||||| || ||||||||| || |||||||||||||||
Sbjct: 75 atatatgcctagattcattaatatctatatgaatatgtgcaatgctagaaagt 23
>45514_miR1132:micropc
Length = 149
Score = 65.9 bits (33), Expect = 9e-12
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagt 132
||||||| ||||||||||||| || ||||||||| || |||||||||||||||
Sbjct: 75 atatatgcctagattcattaatatctatatgaatatgtgcaatgctagaaagt 23
>45099_miR1132:micropc
Length = 149
Score = 65.9 bits (33), Expect = 9e-12
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaaagt 132
||||||| ||||||||||||| || ||||||||| || |||||||||||||||
Sbjct: 75 atatatgcctagattcattaatatctatatgaatatgtgcaatgctagaaagt 23
>44937_miR819:micropc
Length = 94
Score = 63.9 bits (32), Expect = 3e-11
Identities = 59/67 (88%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 77 cacatatatgtctagattcattaac--atatatatgaatgtgggcaatgctagaaagtct 134
||||||||||| |||| |||||||| |||||||| ||| |||||||| ||||||||||
Sbjct: 25 cacatatatgtatagactcattaacatatatatataaatatgggcaataatagaaagtct 84
Query: 135 tataata 141
|||||||
Sbjct: 85 tataata 91
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 24 ttataagactttctatcattgcctacatttatata 58
|||||||||||||||| |||||| | |||||||||
Sbjct: 89 ttataagactttctattattgcccatatttatata 55
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 tcaggttataagactttcta 38
||||||||||||||||||||
Sbjct: 1 tcaggttataagactttcta 20
>45731_miR446:micropc
Length = 86
Score = 61.9 bits (31), Expect = 1e-10
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 77 cacatatatgtctagattcattaacatatatatgaatgtgggcaatg 123
||||||||||| |||||||||||| || ||||||||||||| |||||
Sbjct: 47 cacatatatgtttagattcattaaaatctatatgaatgtggacaatg 1
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 85 tgtctagattcattaacatatatatgaatgtgggcaatg 123
||||||||||||||||||| ||||||||||||||||||
Sbjct: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
>46336_miR809:micropc
Length = 98
Score = 60.0 bits (30), Expect = 5e-10
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||||| ||| ||||||||||| ||||||||||
Sbjct: 48 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaa 97
>45839_miR809:micropc
Length = 98
Score = 60.0 bits (30), Expect = 5e-10
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||||||| ||| ||||||||||| ||||||||||
Sbjct: 48 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaa 97
>46437_miR1436:micropc
Length = 108
Score = 58.0 bits (29), Expect = 2e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 92 attcattaacatatatatgaatgtgggcaatgctagaaagtctta 136
||||||||| || |||||| ||||||||||||||||||| |||||
Sbjct: 44 attcattaatatctatatgtatgtgggcaatgctagaaaatctta 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 108 atgaatgtgggcaatgctagaaagtctta 136
|||||| || |||||||||||||||||||
Sbjct: 49 atgaatatgagcaatgctagaaagtctta 21
>46801_miR809:micropc
Length = 110
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 87 tctagattcattaacatatatatgaatgtgggcaatgctagaa 129
||||||||||||||||| ||||||||||||| |||| |||||
Sbjct: 44 tctagattcattaacattaatatgaatgtgggaaatgatagaa 2
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 80 atatatgtctagattcattaacat 103
|||||||| |||||||||||||||
Sbjct: 50 atatatgtttagattcattaacat 73
