miRNEST 2.0, an integrative microRNA resource :: BLAST
>46163_miR171:micropc
Length = 83
Score = 165 bits (83), Expect = 7e-42
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 8 aggtattggcgtgcctcaatttaaagacatggttagatgaagagatattagccatgtgat 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggtattggcgtgcctcaatttaaagacatggttagatgaagagatattagccatgtgat 60
Query: 68 ttgattgagccgcgtcaatatct 90
|||||||||||||||||||||||
Sbjct: 61 ttgattgagccgcgtcaatatct 83
>46553_miR171:micropc
Length = 81
Score = 161 bits (81), Expect = 1e-40
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 9 ggtattggcgtgcctcaatttaaagacatggttagatgaagagatattagccatgtgatt 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtattggcgtgcctcaatttaaagacatggttagatgaagagatattagccatgtgatt 60
Query: 69 tgattgagccgcgtcaatatc 89
|||||||||||||||||||||
Sbjct: 61 tgattgagccgcgtcaatatc 81
>45160_miR171:micropc
Length = 81
Score = 161 bits (81), Expect = 1e-40
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 9 ggtattggcgtgcctcaatttaaagacatggttagatgaagagatattagccatgtgatt 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtattggcgtgcctcaatttaaagacatggttagatgaagagatattagccatgtgatt 60
Query: 69 tgattgagccgcgtcaatatc 89
|||||||||||||||||||||
Sbjct: 61 tgattgagccgcgtcaatatc 81
>45337_miR171:micropc
Length = 79
Score = 157 bits (79), Expect = 2e-39
Identities = 79/79 (100%)
Strand = Plus / Plus
Query: 10 gtattggcgtgcctcaatttaaagacatggttagatgaagagatattagccatgtgattt 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtattggcgtgcctcaatttaaagacatggttagatgaagagatattagccatgtgattt 60
Query: 70 gattgagccgcgtcaatat 88
|||||||||||||||||||
Sbjct: 61 gattgagccgcgtcaatat 79
>45523_miR171:micropc
Length = 82
Score = 65.9 bits (33), Expect = 5e-12
Identities = 73/84 (86%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 8 aggtattggcgtgcctcaatttaaagacatggttagatgaagagat-attagccatgtga 66
||||||||||| |||||||||||||||| |||||| ||| | || |||||||||||
Sbjct: 1 aggtattggcgcgcctcaatttaaagacgtggttaaatg--ggcatgattagccatgtat 58
Query: 67 tttgattgagccgcgtcaatatct 90
||| ||||||||||||||||||||
Sbjct: 59 tttcattgagccgcgtcaatatct 82
>46593_miR171:micropc
Length = 80
Score = 61.9 bits (31), Expect = 8e-11
Identities = 71/82 (86%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 9 ggtattggcgtgcctcaatttaaagacatggttagatgaagagat-attagccatgtgat 67
|||||||||| |||||||||||||||| |||||| ||| | || ||||||||||| |
Sbjct: 1 ggtattggcgcgcctcaatttaaagacgtggttaaatg--ggcatgattagccatgtatt 58
Query: 68 ttgattgagccgcgtcaatatc 89
|| |||||||||||||||||||
Sbjct: 59 ttcattgagccgcgtcaatatc 80
>45177_miR171:micropc
Length = 79
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 9 ggtattggcgtgcctcaatttaaagacatggtta 42
||||||||||||||||||||| ||||||||||||
Sbjct: 1 ggtattggcgtgcctcaatttgaagacatggtta 34
>44828_miR171:micropc
Length = 78
Score = 58.0 bits (29), Expect = 1e-09
Identities = 69/80 (86%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 10 gtattggcgtgcctcaatttaaagacatggttagatgaagagat-attagccatgtgatt 68
||||||||| |||||||||||||||| |||||| ||| | || ||||||||||| ||
Sbjct: 1 gtattggcgcgcctcaatttaaagacgtggttaaatg--ggcatgattagccatgtattt 58
Query: 69 tgattgagccgcgtcaatat 88
| ||||||||||||||||||
Sbjct: 59 tcattgagccgcgtcaatat 78
>46684_miR171:micropc
Length = 79
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tttgattgagccgcgtcaatatc 89
|||||||||||||||||||||||
Sbjct: 57 tttgattgagccgcgtcaatatc 79
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 11 tattggcgtgcctcaatttaaagacatggttagatga 47
||||||||||||||||| ||| ||||||||| ||||
Sbjct: 1 tattggcgtgcctcaatctaattacatggttaaatga 37
>45361_miR171:micropc
Length = 79
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 tttgattgagccgcgtcaatatc 89
|||||||||||||||||||||||
Sbjct: 57 tttgattgagccgcgtcaatatc 79
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 11 tattggcgtgcctcaatttaaagacatggttagatga 47
||||||||||||||||| ||| ||||||||| ||||
Sbjct: 1 tattggcgtgcctcaatctaattacatggttaaatga 37
>45662_miR171:micropc
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 67 tttgattgagccgcgtcaatat 88
||||||||||||||||||||||
Sbjct: 57 tttgattgagccgcgtcaatat 78
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 11 tattggcgtgcctcaatttaaagacatggttagatga 47
||||||||||||||||| ||| ||||||||| ||||
Sbjct: 1 tattggcgtgcctcaatctaattacatggttaaatga 37
>44859_miR171:micropc
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgcgtcaatatct 90
||||||||||||||||||||||
Sbjct: 63 tgattgagccgcgtcaatatct 84
>46257_miR171:micropc
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgcgtcaatatc 89
|||||||||||||||||||||
Sbjct: 63 tgattgagccgcgtcaatatc 83
>45171_miR171:micropc
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgcgtcaatatc 89
|||||||||||||||||||||
Sbjct: 63 tgattgagccgcgtcaatatc 83
>44972_miR171:micropc
Length = 102
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 70 gattgagccgcgtcaatatct 90
|||||||||||||||||||||
Sbjct: 82 gattgagccgcgtcaatatct 102
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 8 aggtattggcgtgcctcaat 27
||||||||||||||||||||
Sbjct: 1 aggtattggcgtgcctcaat 20
>46581_miR171:micropc
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 69 tgattgagccgcgtcaatat 88
||||||||||||||||||||
Sbjct: 62 tgattgagccgcgtcaatat 81
>45488_miR171:micropc
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 gattgagccgcgtcaatatc 89
||||||||||||||||||||
Sbjct: 81 gattgagccgcgtcaatatc 100
>44829_miR171:micropc
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 gattgagccgcgtcaatatc 89
||||||||||||||||||||
Sbjct: 81 gattgagccgcgtcaatatc 100
