miRNEST 2.0, an integrative microRNA resource :: BLAST
>46823_miR171:micropc
Length = 91
Score = 95.6 bits (48), Expect = 6e-21
Identities = 80/91 (87%), Gaps = 6/91 (6%)
Strand = Plus / Plus
Query: 9 agcgatgttggtgaggttcaatccgaagacggatttacgaa------gagccgtaaagaa 62
||||||||||||||||||||||||||||||||||||||||| || |||||| |
Sbjct: 1 agcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaata 60
Query: 63 cgatctctgattgagccgcgccaatatcact 93
||||||| |||||||||||||||||||||||
Sbjct: 61 cgatctcagattgagccgcgccaatatcact 91
>46414_miR171:micropc
Length = 89
Score = 91.7 bits (46), Expect = 9e-20
Identities = 78/89 (87%), Gaps = 6/89 (6%)
Strand = Plus / Plus
Query: 10 gcgatgttggtgaggttcaatccgaagacggatttacgaa------gagccgtaaagaac 63
|||||||||||||||||||||||||||||||||||||||| || |||||| ||
Sbjct: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
Query: 64 gatctctgattgagccgcgccaatatcac 92
|||||| ||||||||||||||||||||||
Sbjct: 61 gatctcagattgagccgcgccaatatcac 89
>46256_miR171:micropc
Length = 89
Score = 91.7 bits (46), Expect = 9e-20
Identities = 78/89 (87%), Gaps = 6/89 (6%)
Strand = Plus / Plus
Query: 10 gcgatgttggtgaggttcaatccgaagacggatttacgaa------gagccgtaaagaac 63
|||||||||||||||||||||||||||||||||||||||| || |||||| ||
Sbjct: 1 gcgatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatac 60
Query: 64 gatctctgattgagccgcgccaatatcac 92
|||||| ||||||||||||||||||||||
Sbjct: 61 gatctcagattgagccgcgccaatatcac 89
>44930_miR171:micropc
Length = 86
Score = 85.7 bits (43), Expect = 6e-18
Identities = 75/86 (87%), Gaps = 6/86 (6%)
Strand = Plus / Plus
Query: 12 gatgttggtgaggttcaatccgaagacggatttacgaa------gagccgtaaagaacga 65
|||||||||||||||||||||||||||||||||||||| || |||||| ||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
Query: 66 tctctgattgagccgcgccaatatca 91
|||| |||||||||||||||||||||
Sbjct: 61 tctcagattgagccgcgccaatatca 86
>46236_miR171:micropc
Length = 85
Score = 83.8 bits (42), Expect = 2e-17
Identities = 74/85 (87%), Gaps = 6/85 (7%)
Strand = Plus / Plus
Query: 12 gatgttggtgaggttcaatccgaagacggatttacgaa------gagccgtaaagaacga 65
|||||||||||||||||||||||||||||||||||||| || |||||| ||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
Query: 66 tctctgattgagccgcgccaatatc 90
|||| ||||||||||||||||||||
Sbjct: 61 tctcagattgagccgcgccaatatc 85
>45865_miR171:micropc
Length = 85
Score = 83.8 bits (42), Expect = 2e-17
Identities = 74/85 (87%), Gaps = 6/85 (7%)
Strand = Plus / Plus
Query: 12 gatgttggtgaggttcaatccgaagacggatttacgaa------gagccgtaaagaacga 65
|||||||||||||||||||||||||||||||||||||| || |||||| ||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
Query: 66 tctctgattgagccgcgccaatatc 90
|||| ||||||||||||||||||||
Sbjct: 61 tctcagattgagccgcgccaatatc 85
>45507_miR171:micropc
Length = 88
Score = 83.8 bits (42), Expect = 2e-17
Identities = 77/88 (87%), Gaps = 3/88 (3%)
Strand = Plus / Plus
Query: 9 agcgatgttggtgaggttcaatccgaagacggatttacgaagagc---cgtaaagaacga 65
||||||||||||||||||||||||||||||| |||||| | ||||||||||||
Sbjct: 1 agcgatgttggtgaggttcaatccgaagacgagtttacgttttgttttcgtaaagaacga 60
Query: 66 tctctgattgagccgcgccaatatcact 93
|||| |||||||||||||||||||||||
Sbjct: 61 tctcagattgagccgcgccaatatcact 88
>45007_miR171:micropc
Length = 85
Score = 83.8 bits (42), Expect = 2e-17
Identities = 74/85 (87%), Gaps = 6/85 (7%)
Strand = Plus / Plus
Query: 12 gatgttggtgaggttcaatccgaagacggatttacgaa------gagccgtaaagaacga 65
|||||||||||||||||||||||||||||||||||||| || |||||| ||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacga 60
Query: 66 tctctgattgagccgcgccaatatc 90
|||| ||||||||||||||||||||
Sbjct: 61 tctcagattgagccgcgccaatatc 85
>46075_miR171:micropc
Length = 83
Score = 79.8 bits (40), Expect = 4e-16
Identities = 72/83 (86%), Gaps = 6/83 (7%)
Strand = Plus / Plus
Query: 13 atgttggtgaggttcaatccgaagacggatttacgaa------gagccgtaaagaacgat 66
||||||||||||||||||||||||||||||||||||| || |||||| |||||
Sbjct: 1 atgttggtgaggttcaatccgaagacggatttacgaattgattcagtcgtaaaatacgat 60
Query: 67 ctctgattgagccgcgccaatat 89
||| |||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatat 83
>45439_miR171:micropc
Length = 86
Score = 79.8 bits (40), Expect = 4e-16
Identities = 75/86 (87%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 10 gcgatgttggtgaggttcaatccgaagacggatttacgaagagc---cgtaaagaacgat 66
|||||||||||||||||||||||||||||| |||||| | |||||||||||||
Sbjct: 1 gcgatgttggtgaggttcaatccgaagacgagtttacgttttgttttcgtaaagaacgat 60
Query: 67 ctctgattgagccgcgccaatatcac 92
||| ||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatatcac 86
>45180_miR171:micropc
Length = 86
Score = 79.8 bits (40), Expect = 4e-16
Identities = 75/86 (87%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 10 gcgatgttggtgaggttcaatccgaagacggatttacgaagagc---cgtaaagaacgat 66
|||||||||||||||||||||||||||||| |||||| | |||||||||||||
Sbjct: 1 gcgatgttggtgaggttcaatccgaagacgagtttacgttttgttttcgtaaagaacgat 60
Query: 67 ctctgattgagccgcgccaatatcac 92
||| ||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatatcac 86
>46191_miR171:micropc
Length = 83
Score = 73.8 bits (37), Expect = 2e-14
Identities = 72/83 (86%), Gaps = 3/83 (3%)
Strand = Plus / Plus
Query: 12 gatgttggtgaggttcaatccgaagacggatttacgaagagc---cgtaaagaacgatct 68
|||||||||||||||||||||||||||| |||||| | |||||||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacgagtttacgttttgttttcgtaaagaacgatct 60
Query: 69 ctgattgagccgcgccaatatca 91
| |||||||||||||||||||||
Sbjct: 61 cagattgagccgcgccaatatca 83
>45723_miR171:micropc
Length = 82
Score = 71.9 bits (36), Expect = 9e-14
Identities = 71/82 (86%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 12 gatgttggtgaggttcaatccgaagacggatttacgaagagc---cgtaaagaacgatct 68
|||||||||||||||||||||||||||| |||||| | |||||||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacgagtttacgttttgttttcgtaaagaacgatct 60
Query: 69 ctgattgagccgcgccaatatc 90
| ||||||||||||||||||||
Sbjct: 61 cagattgagccgcgccaatatc 82
>45597_miR171:micropc
Length = 82
Score = 71.9 bits (36), Expect = 9e-14
Identities = 71/82 (86%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 12 gatgttggtgaggttcaatccgaagacggatttacgaagagc---cgtaaagaacgatct 68
|||||||||||||||||||||||||||| |||||| | |||||||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacgagtttacgttttgttttcgtaaagaacgatct 60
Query: 69 ctgattgagccgcgccaatatc 90
| ||||||||||||||||||||
Sbjct: 61 cagattgagccgcgccaatatc 82
>45121_miR171:micropc
Length = 82
Score = 71.9 bits (36), Expect = 9e-14
Identities = 71/82 (86%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 12 gatgttggtgaggttcaatccgaagacggatttacgaagagc---cgtaaagaacgatct 68
|||||||||||||||||||||||||||| |||||| | |||||||||||||||
Sbjct: 1 gatgttggtgaggttcaatccgaagacgagtttacgttttgttttcgtaaagaacgatct 60
Query: 69 ctgattgagccgcgccaatatc 90
| ||||||||||||||||||||
Sbjct: 61 cagattgagccgcgccaatatc 82
>46459_miR171:micropc
Length = 80
Score = 67.9 bits (34), Expect = 1e-12
Identities = 69/80 (86%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 13 atgttggtgaggttcaatccgaagacggatttacgaagagc---cgtaaagaacgatctc 69
||||||||||||||||||||||||||| |||||| | ||||||||||||||||
Sbjct: 1 atgttggtgaggttcaatccgaagacgagtttacgttttgttttcgtaaagaacgatctc 60
Query: 70 tgattgagccgcgccaatat 89
|||||||||||||||||||
Sbjct: 61 agattgagccgcgccaatat 80
>46507_miR171:micropc
Length = 110
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatcac 92
||||||||||||| |||||||||||
Sbjct: 85 tctgattgagccgtgccaatatcac 109
>46483_miR171:micropc
Length = 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatcac 92
||||||||||||| |||||||||||
Sbjct: 85 tctgattgagccgtgccaatatcac 109
>46148_miR171:micropc
Length = 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatcac 92
||||||||||||| |||||||||||
Sbjct: 85 tctgattgagccgtgccaatatcac 109
>46076_miR171:micropc
Length = 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatcac 92
||||||||||||| |||||||||||
Sbjct: 85 tctgattgagccgtgccaatatcac 109
>45982_miR171:micropc
Length = 110
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatcac 92
||||||||||||| |||||||||||
Sbjct: 85 tctgattgagccgtgccaatatcac 109
>45895_miR171:micropc
Length = 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatcac 92
||||||||||||| |||||||||||
Sbjct: 85 tctgattgagccgtgccaatatcac 109
>45604_miR171:micropc
Length = 110
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatcac 92
||||||||||||| |||||||||||
Sbjct: 85 tctgattgagccgtgccaatatcac 109
>45577_miR171:micropc
Length = 110
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatcac 92
||||||||||||| |||||||||||
Sbjct: 85 tctgattgagccgtgccaatatcac 109
>45378_miR171:micropc
Length = 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatcac 92
||||||||||||| |||||||||||
Sbjct: 85 tctgattgagccgtgccaatatcac 109
>44948_miR171:micropc
Length = 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 tctgattgagccgcgccaatatcac 92
||||||||||||| |||||||||||
Sbjct: 85 tctgattgagccgtgccaatatcac 109
>45636_miR171:micropc
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 67 ctctgattgagccgcgccaatatc 90
|||||||||||||| |||||||||
Sbjct: 71 ctctgattgagccgtgccaatatc 94
>45484_miR171:micropc
Length = 86
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 70 tgattgagccgcgccaatatcact 93
||||||||||| ||||||||||||
Sbjct: 63 tgattgagccgtgccaatatcact 86
>44843_miR171:micropc
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 67 ctctgattgagccgcgccaatatc 90
|||||||||||||| |||||||||
Sbjct: 71 ctctgattgagccgtgccaatatc 94
