miRNEST 2.0, an integrative microRNA resource :: BLAST
>46437_miR1436:micropc
Length = 108
Score = 123 bits (62), Expect = 3e-29
Identities = 86/94 (91%)
Strand = Plus / Plus
Query: 17 tttcataatgtaagactttctagcattgcttatattcattaacatctatatgaatgtggg 76
||||| |||||||||||||||||||||||| ||||||||||| ||||||||| |||||||
Sbjct: 11 tttcacaatgtaagactttctagcattgctcatattcattaatatctatatgtatgtggg 70
Query: 77 caatgctagaaagacttgtattatgaaacggagg 110
|||||||||||| ||| |||||||||||||||
Sbjct: 71 caatgctagaaaatcttacattatgaaacggagg 104
Score = 69.9 bits (35), Expect = 4e-13
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 7 actccctccgtttcataatgtaagactttctagcattgc 45
||||||||||||||||||||||||| |||||||||||||
Sbjct: 108 actccctccgtttcataatgtaagattttctagcattgc 70
>45687_miR819:micropc
Length = 84
Score = 87.7 bits (44), Expect = 2e-18
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 27 taagactttctagcattgcttatattcattaacatctatatgaatgtgggcaatgctaga 86
||||||||||| ||||| || | |||||||||||| ||||||||||||||||||||||||
Sbjct: 9 taagactttctggcattactcacattcattaacatatatatgaatgtgggcaatgctaga 68
Query: 87 aagacttgtattatga 102
||| ||| || |||||
Sbjct: 69 aagtcttataatatga 84
>44978_miR1130:micropc
Length = 144
Score = 71.9 bits (36), Expect = 1e-13
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 43 tgcttatattcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatga 102
|||||| |||||||| ||| ||||| ||||||| ||||||||||||| ||| |||||||
Sbjct: 68 tgcttagattcattagcatatatataaatgtggacaatgctagaaagtcttacattatga 9
Query: 103 aacggagg 110
||||||||
Sbjct: 8 aacggagg 1
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 11 cctccgtttcataatgtaagactttctagcattg 44
||||||||||||||||||||||||||||||||||
Sbjct: 1 cctccgtttcataatgtaagactttctagcattg 34
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 11 cctccgtttcataatgtaagactttctagcatt 43
|||| ||||||||||||||||||||||||||||
Sbjct: 144 cctctgtttcataatgtaagactttctagcatt 112
Score = 42.1 bits (21), Expect = 9e-05
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 58 acatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggagg 110
|||||||||||||| || |||||||||||| ||| |||||||||| ||||
Sbjct: 92 acatctatatgaatacaggtaatgctagaaagtcttacattatgaaacagagg 144
>45215_miR1120:micropc
Length = 142
Score = 63.9 bits (32), Expect = 2e-11
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
||||||||||||||||||| || || |||||| |||||| ||| |||||||||||||||
Sbjct: 83 attcattaacatctatatgtatatgagcaatgttagaaattcttatattatgaaacggag 142
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaag 89
|||||||||||| || ||||| ||||||||||||||||||
Sbjct: 60 attcattaacatataaatgaacgtgggcaatgctagaaag 21
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 12 ctccgtttcataatgtaagactttctagcattgc 45
|||||||| ||||||||| |||||||||||||||
Sbjct: 1 ctccgttttataatgtaaaactttctagcattgc 34
Score = 48.1 bits (24), Expect = 1e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 12 ctccgtttcataatgtaagactttctagcattgcttatat 51
|||||||||||||| ||||| |||||| ||||||| ||||
Sbjct: 142 ctccgtttcataatataagaatttctaacattgctcatat 103
>46464_miR1132:micropc
Length = 149
Score = 56.0 bits (28), Expect = 6e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 12 ctccgtttcataatgtaagactttctagcattgcttatattcat 55
|||||||||| ||||||| ||||||||||||||| ||||||||
Sbjct: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcat 47
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaag 89
||||||||| |||||||||||| || ||||||||||||||
Sbjct: 63 attcattaatatctatatgaatatgtgcaatgctagaaag 24
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 8 ctccctccgtttcataatgtaagactttctagca 41
||||||||||||||||||||| || |||||||||
Sbjct: 149 ctccctccgtttcataatgtaggattttctagca 116
Score = 42.1 bits (21), Expect = 9e-05
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||| ||||||| ||| |||| | ||||||||| | | ||||||||||||||
Sbjct: 86 attcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacggag 145
Query: 110 g 110
|
Sbjct: 146 g 146
>45731_miR446:micropc
Length = 86
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatg 81
||||||||||||| ||||||||||||||||||
Sbjct: 55 attcattaacatcaatatgaatgtgggcaatg 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatg 81
||||||||| |||||||||||||||| |||||
Sbjct: 32 attcattaaaatctatatgaatgtggacaatg 1
>45514_miR1132:micropc
Length = 149
Score = 56.0 bits (28), Expect = 6e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 12 ctccgtttcataatgtaagactttctagcattgcttatattcat 55
|||||||||| ||||||| ||||||||||||||| ||||||||
Sbjct: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcat 47
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaag 89
||||||||| |||||||||||| || ||||||||||||||
Sbjct: 63 attcattaatatctatatgaatatgtgcaatgctagaaag 24
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 8 ctccctccgtttcataatgtaagactttctagca 41
||||||||||||||||||||| || |||||||||
Sbjct: 149 ctccctccgtttcataatgtaggattttctagca 116
Score = 42.1 bits (21), Expect = 9e-05
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||| ||||||| ||| |||| | ||||||||| | | ||||||||||||||
Sbjct: 86 attcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacggag 145
Query: 110 g 110
|
Sbjct: 146 g 146
>45099_miR1132:micropc
Length = 149
Score = 56.0 bits (28), Expect = 6e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 12 ctccgtttcataatgtaagactttctagcattgcttatattcat 55
|||||||||| ||||||| ||||||||||||||| ||||||||
Sbjct: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcat 47
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaag 89
||||||||| |||||||||||| || ||||||||||||||
Sbjct: 63 attcattaatatctatatgaatatgtgcaatgctagaaag 24
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 8 ctccctccgtttcataatgtaagactttctagca 41
||||||||||||||||||||| || |||||||||
Sbjct: 149 ctccctccgtttcataatgtaggattttctagca 116
Score = 42.1 bits (21), Expect = 9e-05
Identities = 51/61 (83%)
Strand = Plus / Plus
Query: 50 attcattaacatctatatgaatgtgggcaatgctagaaagacttgtattatgaaacggag 109
|||||||||| ||||||| ||| |||| | ||||||||| | | ||||||||||||||
Sbjct: 86 attcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacggag 145
Query: 110 g 110
|
Sbjct: 146 g 146
