miRNEST 2.0, an integrative microRNA resource :: BLAST
>45260_miR819:micropc
Length = 116
Score = 99.6 bits (50), Expect = 4e-22
Identities = 81/90 (90%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 28 atttatatagatgttaatgaatctag-cacatatatgtctagatttattaacacaaatat 86
|||||||||||||||||||||| ||| ||||||||||| |||||| ||||||| | ||||
Sbjct: 90 atttatatagatgttaatgaatatagacacatatatgtttagattcattaacatatatat 31
Query: 87 gaatgtgggcaatgctagaaagtcttataa 116
|||| ||| ||||||||||||||||||||
Sbjct: 30 gaatatggataatgctagaaagtcttataa 1
Score = 60.0 bits (30), Expect = 4e-10
Identities = 87/105 (82%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatct-agcacatatatgtctagatt 71
|||||||||| ||| ||| ||||| |||||||||||||| | || |||| |||||| |||
Sbjct: 12 tctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatatt 71
Query: 72 tattaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
||||||| |||| ||| ||| | || ||||||||||||||||
Sbjct: 72 cattaacatctatataaatatggacnatactagaaagtcttataa 116
>45075_miR819:micropc
Length = 116
Score = 99.6 bits (50), Expect = 4e-22
Identities = 81/90 (90%), Gaps = 1/90 (1%)
Strand = Plus / Minus
Query: 28 atttatatagatgttaatgaatctag-cacatatatgtctagatttattaacacaaatat 86
|||||||||||||||||||||| ||| ||||||||||| |||||| ||||||| | ||||
Sbjct: 90 atttatatagatgttaatgaatatagacacatatatgtttagattcattaacatatatat 31
Query: 87 gaatgtgggcaatgctagaaagtcttataa 116
|||| ||| ||||||||||||||||||||
Sbjct: 30 gaatatggataatgctagaaagtcttataa 1
Score = 60.0 bits (30), Expect = 4e-10
Identities = 87/105 (82%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatct-agcacatatatgtctagatt 71
|||||||||| ||| ||| ||||| |||||||||||||| | || |||| |||||| |||
Sbjct: 12 tctagcattatccatattcatatatatgttaatgaatctaaacatatatgtgtctatatt 71
Query: 72 tattaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
||||||| |||| ||| ||| | || ||||||||||||||||
Sbjct: 72 cattaacatctatataaatatggacnatactagaaagtcttataa 116
>45687_miR819:micropc
Length = 84
Score = 71.9 bits (36), Expect = 1e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 73 attaacacaaatatgaatgtgggcaatgctagaaagtcttataa 116
||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 36 attaacatatatatgaatgtgggcaatgctagaaagtcttataa 79
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaat 49
||||||||| |||||||| ||||| ||||||||||||
Sbjct: 68 tctagcattgcccacattcatatatatgttaatgaat 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 85 atgaatgtgggcaatgctagaaagtcttataa 116
||||||||| | ||||| ||||||||||||||
Sbjct: 37 atgaatgtgagtaatgccagaaagtcttataa 6
>46670_miR809:micropc
Length = 97
Score = 67.9 bits (34), Expect = 2e-12
Identities = 66/76 (86%), Gaps = 3/76 (3%)
Strand = Plus / Plus
Query: 34 atagatgttaatgaatctag---cacatatatgtctagatttattaacacaaatatgaat 90
|||||||||||| ||||||| |||||||||||||| ||| ||||||| | ||||||||
Sbjct: 22 atagatgttaataaatctagacacacatatatgtctacattcattaacatatatatgaat 81
Query: 91 gtgggcaatgctagaa 106
||||| |||| |||||
Sbjct: 82 gtgggtaatgttagaa 97
Score = 60.0 bits (30), Expect = 4e-10
Identities = 62/71 (87%), Gaps = 5/71 (7%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatata----tgtctag 68
|||| ||||||||||||| ||||| |||||||||||| ||| ||||||| |||||||
Sbjct: 96 tctaacattacccacattcatatatatgttaatgaatgtag-acatatatgtgtgtctag 38
Query: 69 atttattaaca 79
|||||||||||
Sbjct: 37 atttattaaca 27
>46464_miR1132:micropc
Length = 149
Score = 67.9 bits (34), Expect = 2e-12
Identities = 84/100 (84%), Gaps = 3/100 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta---gcacatatatgtctaga 69
||||||| |||||| ||||||||||| ||||||||||||| || ||||||| |||||
Sbjct: 122 tctagcactacccatatttatatagaagttaatgaatctaaacacatatatatgcctaga 63
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagt 109
|| ||||| | |||||||| || |||||||||||||||
Sbjct: 62 ttcattaatatctatatgaatatgtgcaatgctagaaagt 23
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| | || ||| |||||||| |||||||||||||
Sbjct: 27 tctagcattgcacatattcatatagatattaatgaatctag 67
>45603_miR819:micropc
Length = 61
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Minus
Query: 83 atatgaatgtgggcaatgctagaaagtcttataa 116
||||||||||||||||||||||||||||||||||
Sbjct: 39 atatgaatgtgggcaatgctagaaagtcttataa 6
>45514_miR1132:micropc
Length = 149
Score = 67.9 bits (34), Expect = 2e-12
Identities = 84/100 (84%), Gaps = 3/100 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta---gcacatatatgtctaga 69
||||||| |||||| ||||||||||| ||||||||||||| || ||||||| |||||
Sbjct: 122 tctagcactacccatatttatatagaagttaatgaatctaaacacatatatatgcctaga 63
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagt 109
|| ||||| | |||||||| || |||||||||||||||
Sbjct: 62 ttcattaatatctatatgaatatgtgcaatgctagaaagt 23
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| | || ||| |||||||| |||||||||||||
Sbjct: 27 tctagcattgcacatattcatatagatattaatgaatctag 67
>45099_miR1132:micropc
Length = 149
Score = 67.9 bits (34), Expect = 2e-12
Identities = 84/100 (84%), Gaps = 3/100 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta---gcacatatatgtctaga 69
||||||| |||||| ||||||||||| ||||||||||||| || ||||||| |||||
Sbjct: 122 tctagcactacccatatttatatagaagttaatgaatctaaacacatatatatgcctaga 63
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagt 109
|| ||||| | |||||||| || |||||||||||||||
Sbjct: 62 ttcattaatatctatatgaatatgtgcaatgctagaaagt 23
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| | || ||| |||||||| |||||||||||||
Sbjct: 27 tctagcattgcacatattcatatagatattaatgaatctag 67
>44980_miR808:micropc
Length = 97
Score = 67.9 bits (34), Expect = 2e-12
Identities = 66/76 (86%), Gaps = 3/76 (3%)
Strand = Plus / Plus
Query: 34 atagatgttaatgaatctag---cacatatatgtctagatttattaacacaaatatgaat 90
|||||||||||| ||||||| |||||||||||||| ||| ||||||| | ||||||||
Sbjct: 22 atagatgttaataaatctagacacacatatatgtctacattcattaacatatatatgaat 81
Query: 91 gtgggcaatgctagaa 106
||||| |||| |||||
Sbjct: 82 gtgggtaatgttagaa 97
Score = 60.0 bits (30), Expect = 4e-10
Identities = 62/71 (87%), Gaps = 5/71 (7%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatata----tgtctag 68
|||| ||||||||||||| ||||| |||||||||||| ||| ||||||| |||||||
Sbjct: 96 tctaacattacccacattcatatatatgttaatgaatgtag-acatatatgtgtgtctag 38
Query: 69 atttattaaca 79
|||||||||||
Sbjct: 37 atttattaaca 27
>44978_miR1130:micropc
Length = 144
Score = 67.9 bits (34), Expect = 2e-12
Identities = 87/104 (83%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatcta---gcacatatatgtctaga 69
||||||||| ||||||||||||| ||| ||||||||||| ||||||||||| ||||
Sbjct: 25 tctagcattgtccacatttatatatatgctaatgaatctaagcacacatatatgtttaga 84
Query: 70 tttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|||||| ||| |||||||| || |||||||||||||||||
Sbjct: 85 tttattgacatctatatgaatacaggtaatgctagaaagtctta 128
Score = 48.1 bits (24), Expect = 1e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 66 tagatttattaacacaaatatgaatgtgggcaatgctagaaagtctta 113
|||||| |||| || | |||| ||||||| ||||||||||||||||||
Sbjct: 64 tagattcattagcatatatataaatgtggacaatgctagaaagtctta 17
>45731_miR446:micropc
Length = 86
Score = 63.9 bits (32), Expect = 2e-11
Identities = 73/86 (84%), Gaps = 3/86 (3%)
Strand = Plus / Minus
Query: 18 cattacccacatttatatagatgttaatgaatctag---cacatatatgtctagatttat 74
|||| |||||||| |||| ||||||||||||||||| ||||||||||| |||||| ||
Sbjct: 86 cattgcccacattcatattgatgttaatgaatctagacacacatatatgtttagattcat 27
Query: 75 taacacaaatatgaatgtgggcaatg 100
||| | |||||||||||| |||||
Sbjct: 26 taaaatctatatgaatgtggacaatg 1
Score = 63.9 bits (32), Expect = 2e-11
Identities = 70/81 (86%), Gaps = 5/81 (6%)
Strand = Plus / Plus
Query: 24 ccacatttatatagatgttaatgaatctagcacatata----tgtctagatttattaaca 79
||||||| |||||||| |||||||||||| ||||||| |||||||||| |||||||
Sbjct: 7 ccacattcatatagattttaatgaatcta-aacatatatgtgtgtctagattcattaaca 65
Query: 80 caaatatgaatgtgggcaatg 100
|||||||||||||||||||
Sbjct: 66 tcaatatgaatgtgggcaatg 86
>46775_miR808:micropc
Length = 98
Score = 61.9 bits (31), Expect = 1e-10
Identities = 71/82 (86%), Gaps = 3/82 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatata--tgtctagat 70
|||| |||| |||||||| |||| |||||||||||||||| | ||||| | |||||||
Sbjct: 97 tctaacatttcccacattcatattgatgttaatgaatctaaaatatatatctatctagat 38
Query: 71 ttattaaca-caaatatgaatg 91
||||||||| ||||||||||||
Sbjct: 37 ttattaacatcaaatatgaatg 16
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 66 tagatttattaacacaaatatgaatgtgggcaatgctagaa 106
|||||| ||||||| |||||||||||||| |||| |||||
Sbjct: 58 tagattcattaacatcaatatgaatgtgggaaatgttagaa 98
>45913_miR809:micropc
Length = 100
Score = 61.9 bits (31), Expect = 1e-10
Identities = 71/82 (86%), Gaps = 3/82 (3%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctagcacatata--tgtctagat 70
|||| |||| |||||||| |||| |||||||||||||||| | ||||| | |||||||
Sbjct: 98 tctaacatttcccacattcatattgatgttaatgaatctaaaatatatatctatctagat 39
Query: 71 ttattaaca-caaatatgaatg 91
||||||||| ||||||||||||
Sbjct: 38 ttattaacatcaaatatgaatg 17
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 66 tagatttattaacacaaatatgaatgtgggcaatgctagaa 106
|||||| ||||||| |||||||||||||| |||| |||||
Sbjct: 59 tagattcattaacatcaatatgaatgtgggaaatgttagaa 99
>45995_miR446:micropc
Length = 86
Score = 60.0 bits (30), Expect = 4e-10
Identities = 67/77 (87%), Gaps = 3/77 (3%)
Strand = Plus / Minus
Query: 18 cattacccacatttatatagatgttaatgaatctagcacatata--tgtctagatttatt 75
|||| |||||||| |||| |||||||||||||||| | ||||| | ||||||||||||
Sbjct: 86 catttcccacattcatattgatgttaatgaatctaaaatatatatctatctagatttatt 27
Query: 76 aaca-caaatatgaatg 91
|||| ||||||||||||
Sbjct: 26 aacatcaaatatgaatg 10
>45717_miR446:micropc
Length = 86
Score = 60.0 bits (30), Expect = 4e-10
Identities = 67/77 (87%), Gaps = 3/77 (3%)
Strand = Plus / Minus
Query: 18 cattacccacatttatatagatgttaatgaatctagcacatata--tgtctagatttatt 75
|||| |||||||| |||| |||||||||||||||| | ||||| | ||||||||||||
Sbjct: 86 catttcccacattcatattgatgttaatgaatctaaaatatatatctatctagatttatt 27
Query: 76 aaca-caaatatgaatg 91
|||| ||||||||||||
Sbjct: 26 aacatcaaatatgaatg 10
>45215_miR1120:micropc
Length = 142
Score = 60.0 bits (30), Expect = 4e-10
Identities = 70/81 (86%), Gaps = 3/81 (3%)
Strand = Plus / Minus
Query: 32 atatagatgttaatgaatctag-cacata--tatgtctagatttattaacacaaatatga 88
|||||||||||||||||| || |||||| ||| |||||||| ||||||| | | ||||
Sbjct: 100 atatagatgttaatgaatttaaacacataaatatatctagattcattaacatataaatga 41
Query: 89 atgtgggcaatgctagaaagt 109
| |||||||||||||||||||
Sbjct: 40 acgtgggcaatgctagaaagt 20
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| ||||| || || || ||||||||||||||||
Sbjct: 24 tctagcattgcccacgttcatttatatgttaatgaatctag 64
>45176_miR446:micropc
Length = 86
Score = 60.0 bits (30), Expect = 4e-10
Identities = 67/77 (87%), Gaps = 3/77 (3%)
Strand = Plus / Minus
Query: 18 cattacccacatttatatagatgttaatgaatctagcacatata--tgtctagatttatt 75
|||| |||||||| |||| |||||||||||||||| | ||||| | ||||||||||||
Sbjct: 86 catttcccacattcatattgatgttaatgaatctaaaatatatatctatctagatttatt 27
Query: 76 aaca-caaatatgaatg 91
|||| ||||||||||||
Sbjct: 26 aacatcaaatatgaatg 10
>46637_miR446:micropc
Length = 80
Score = 56.0 bits (28), Expect = 6e-09
Identities = 60/70 (85%), Gaps = 3/70 (4%)
Strand = Plus / Minus
Query: 23 cccacatttatatagatgttaatgaatctagc---acatatatgtctagatttattaaca 79
|||| ||| |||| |||||||||||||||||| | ||||||||||||||| |||||||
Sbjct: 77 cccatattcatattgatgttaatgaatctagctagatatatatgtctagattcattaaca 18
Query: 80 caaatatgaa 89
||||||||
Sbjct: 17 ttaatatgaa 8
>46801_miR809:micropc
Length = 110
Score = 54.0 bits (27), Expect = 2e-08
Identities = 70/82 (85%), Gaps = 3/82 (3%)
Strand = Plus / Minus
Query: 28 atttatatagatgttaatgaatct-agcacatata--tgtctagatttattaacacaaat 84
|||||||| ||||||||||||||| | || ||||| | |||||||| ||||||| |||
Sbjct: 83 atttatattgatgttaatgaatctaaacatatatatctatctagattcattaacattaat 24
Query: 85 atgaatgtgggcaatgctagaa 106
||||||||||| |||| |||||
Sbjct: 23 atgaatgtgggaaatgatagaa 2
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
|||| |||| |||||||| |||| ||||||||||||||||
Sbjct: 3 tctatcatttcccacattcatattaatgttaatgaatctag 43
>46336_miR809:micropc
Length = 98
Score = 52.0 bits (26), Expect = 9e-08
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 57 atatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||||||||||||| ||||| | ||||||||||||| ||||||||||
Sbjct: 48 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaa 97
>45839_miR809:micropc
Length = 98
Score = 52.0 bits (26), Expect = 9e-08
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 57 atatatgtctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||||||||||||| ||||| | ||||||||||||| ||||||||||
Sbjct: 48 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaa 97
>46060_miR809:micropc
Length = 87
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| | ||||||||||| ||||||||| |||||||
Sbjct: 85 tctagcatttctcacatttatattgatgttaataaatctag 45
Score = 44.1 bits (22), Expect = 2e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 65 ctagatttattaacacaaatatgaatgtgggcaatgctagaa 106
||||||||||||||| ||||| |||||| | ||||||||||
Sbjct: 45 ctagatttattaacatcaatataaatgtgagaaatgctagaa 86
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 13 tctagcattacccacatttatatagatgttaatgaatctag 53
||||||||| ||| ||| |||| |||||||||||||||||
Sbjct: 3 tctagcattttccatattcatattgatgttaatgaatctag 43
