miRNEST 2.0, an integrative microRNA resource :: BLAST
>45687_miR819:micropc
Length = 84
Score = 89.7 bits (45), Expect = 5e-19
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 71 attcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatga 123
||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 32 attcattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 84
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 19 tcatgttataagactttctagcattacccacattcatata 58
|||| |||||||||||||||||||| ||||||||||||||
Sbjct: 84 tcatattataagactttctagcattgcccacattcatata 45
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 23 gttataagactttctagcattacccacattcat 55
||||||||||||||| ||||||| |||||||||
Sbjct: 5 gttataagactttctggcattactcacattcat 37
>46437_miR1436:micropc
Length = 108
Score = 73.8 bits (37), Expect = 3e-14
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 71 attcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggag 130
||||||| | || |||||| ||||||||||||||||||||||||| | ||||||||||||
Sbjct: 44 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 103
Query: 131 g 131
|
Sbjct: 104 g 104
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 27 taagactttctagcattacccacattcatata 58
||||| ||||||||||| ||||||| ||||||
Sbjct: 88 taagattttctagcattgcccacatacatata 57
>44978_miR1130:micropc
Length = 144
Score = 71.9 bits (36), Expect = 1e-13
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| ||||||||| ||||||| |||||||||||| ||||| | |||||||||
Sbjct: 64 tagattcattagcatatatataaatgtggacaatgctagaaagtcttacattatgaaacg 5
Query: 128 gagg 131
||||
Sbjct: 4 gagg 1
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 27 taagactttctagcattacccacattcatataaatgct 64
||||||||||||||||| ||||||| ||||| |||||
Sbjct: 17 taagactttctagcattgtccacatttatatatatgct 54
Score = 40.1 bits (20), Expect = 4e-04
Identities = 53/64 (82%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||| ||| |||| ||||||||| || ||||||||||| ||||| | ||||||||
Sbjct: 81 tagatttattgacatctatatgaatacaggtaatgctagaaagtcttacattatgaaaca 140
Query: 128 gagg 131
||||
Sbjct: 141 gagg 144
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 27 taagactttctagcattacc 46
||||||||||||||||||||
Sbjct: 128 taagactttctagcattacc 109
>45215_miR1120:micropc
Length = 142
Score = 65.9 bits (33), Expect = 7e-12
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaa 125
|||||||||||| ||||||| ||||| ||||||||||||||||| | ||| | ||| |||
Sbjct: 65 tctagattcattaacatataaatgaacgtgggcaatgctagaaagttttacattataaaa 6
Query: 126 cggag 130
|||||
Sbjct: 5 cggag 1
Score = 56.0 bits (28), Expect = 7e-09
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 71 attcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacggag 130
||||||| |||| |||||| || || |||||| |||||| ||||||| ||||||||||||
Sbjct: 83 attcattaacatctatatgtatatgagcaatgttagaaattcttatattatgaaacggag 142
>45603_miR819:micropc
Length = 61
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 23 gttataagactttctagcattacccacattcatat 57
||||||||||||||||||||| |||||||||||||
Sbjct: 5 gttataagactttctagcattgcccacattcatat 39
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 85 atatgaatgtgggcaatgctagaaaatcttataa 118
||||||||||||||||||||||||| ||||||||
Sbjct: 39 atatgaatgtgggcaatgctagaaagtcttataa 6
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 gttataagactttctagcat 42
||||||||||||||||||||
Sbjct: 57 gttataagactttctagcat 38
>45260_miR819:micropc
Length = 116
Score = 61.9 bits (31), Expect = 1e-10
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataa 118
|||||||||| |||||||||||||| ||| ||||||||||| ||||||||
Sbjct: 51 tagattcattaacatatatatgaatatggataatgctagaaagtcttataa 1
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 24 ttataagactttctagcattacccacattcatata 58
||||||||||||||||||||| ||| |||||||||
Sbjct: 1 ttataagactttctagcattatccatattcatata 35
>45075_miR819:micropc
Length = 116
Score = 61.9 bits (31), Expect = 1e-10
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataa 118
|||||||||| |||||||||||||| ||| ||||||||||| ||||||||
Sbjct: 51 tagattcattaacatatatatgaatatggataatgctagaaagtcttataa 1
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 24 ttataagactttctagcattacccacattcatata 58
||||||||||||||||||||| ||| |||||||||
Sbjct: 1 ttataagactttctagcattatccatattcatata 35
>46670_miR809:micropc
Length = 97
Score = 58.0 bits (29), Expect = 2e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||| ||||||| ||||||||||||||||||| |||| |||||
Sbjct: 53 tgtctacattcattaacatatatatgaatgtgggtaatgttagaa 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 34 ttctagcattacccacattcatata 58
||||| |||||||||||||||||||
Sbjct: 97 ttctaacattacccacattcatata 73
>44980_miR808:micropc
Length = 97
Score = 58.0 bits (29), Expect = 2e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||| ||||||| ||||||||||||||||||| |||| |||||
Sbjct: 53 tgtctacattcattaacatatatatgaatgtgggtaatgttagaa 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 34 ttctagcattacccacattcatata 58
||||| |||||||||||||||||||
Sbjct: 97 ttctaacattacccacattcatata 73
>45731_miR446:micropc
Length = 86
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 64 tgtctagattcatttacatatatatgaatgtgggcaatg 102
|||||||||||||| |||| ||||||||||||||||||
Sbjct: 48 tgtctagattcattaacatcaatatgaatgtgggcaatg 86
>46464_miR1132:micropc
Length = 149
Score = 48.1 bits (24), Expect = 2e-06
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 67 ctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaac 126
||||||||||| | || ||||||||| || ||||||||||||| | ||| | | ||||||
Sbjct: 67 ctagattcattaatatctatatgaatatgtgcaatgctagaaagtattacattgtgaaac 8
Query: 127 ggag 130
||||
Sbjct: 7 ggag 4
Score = 48.1 bits (24), Expect = 2e-06
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| || | ||||| ||| |||| | |||||||||||| || | |||||||||
Sbjct: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
Query: 128 gagg 131
||||
Sbjct: 143 gagg 146
>45514_miR1132:micropc
Length = 149
Score = 48.1 bits (24), Expect = 2e-06
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 67 ctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaac 126
||||||||||| | || ||||||||| || ||||||||||||| | ||| | | ||||||
Sbjct: 67 ctagattcattaatatctatatgaatatgtgcaatgctagaaagtattacattgtgaaac 8
Query: 127 ggag 130
||||
Sbjct: 7 ggag 4
Score = 48.1 bits (24), Expect = 2e-06
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| || | ||||| ||| |||| | |||||||||||| || | |||||||||
Sbjct: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
Query: 128 gagg 131
||||
Sbjct: 143 gagg 146
>45099_miR1132:micropc
Length = 149
Score = 48.1 bits (24), Expect = 2e-06
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 67 ctagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaac 126
||||||||||| | || ||||||||| || ||||||||||||| | ||| | | ||||||
Sbjct: 67 ctagattcattaatatctatatgaatatgtgcaatgctagaaagtattacattgtgaaac 8
Query: 127 ggag 130
||||
Sbjct: 7 ggag 4
Score = 48.1 bits (24), Expect = 2e-06
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 68 tagattcatttacatatatatgaatgtgggcaatgctagaaaatcttataatatgaaacg 127
|||||||||| || | ||||| ||| |||| | |||||||||||| || | |||||||||
Sbjct: 83 tagattcattaacttctatataaatatgggtagtgctagaaaatcctacattatgaaacg 142
Query: 128 gagg 131
||||
Sbjct: 143 gagg 146
>46801_miR809:micropc
Length = 110
Score = 46.1 bits (23), Expect = 7e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 66 tctagattcatttacatatatatgaatgtgggcaatgctagaa 108
|||||||||||| |||| ||||||||||||| |||| |||||
Sbjct: 44 tctagattcattaacattaatatgaatgtgggaaatgatagaa 2
>44937_miR819:micropc
Length = 94
Score = 46.1 bits (23), Expect = 7e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 81 atatatatgaatgtgggcaatgctagaaaatcttataatatga 123
|||||||| ||| |||||||| |||||| |||||||||||||
Sbjct: 52 atatatataaatatgggcaataatagaaagtcttataatatga 94
