miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46603_miR806:micropc
          Length = 188

 Score =  153 bits (77), Expect = 7e-38
 Identities = 122/137 (89%)
 Strand = Plus / Plus

                                                                       
Query: 78  ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
           ||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||||| |
Sbjct: 52  ttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgca 111

                                                                       
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
             ||| || ||||||||||||||| ||  ||||||||||||| ||||||| ||| |||||
Sbjct: 112 ggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgtg 171

                            
Query: 198 ctaaaaagtcaacggtg 214
           |||||||||||||||||
Sbjct: 172 ctaaaaagtcaacggtg 188



 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 46/48 (95%), Gaps = 1/48 (2%)
 Strand = Plus / Minus

                                                           
Query: 166 ttttttgaataagacgaacggtcaaacatgtgc-taaaaagtcaacgg 212
           ||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 50  ttttttgaataagacgaacggtcaaacatgtgcttaaaatgtcaacgg 3




>46529_miR806:micropc
          Length = 188

 Score =  153 bits (77), Expect = 7e-38
 Identities = 122/137 (89%)
 Strand = Plus / Plus

                                                                       
Query: 78  ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
           ||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||||| |
Sbjct: 52  ttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgca 111

                                                                       
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
             ||| || ||||||||||||||| ||  ||||||||||||| ||||||| ||| |||||
Sbjct: 112 ggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgtg 171

                            
Query: 198 ctaaaaagtcaacggtg 214
           |||||||||||||||||
Sbjct: 172 ctaaaaagtcaacggtg 188



 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 46/48 (95%), Gaps = 1/48 (2%)
 Strand = Plus / Minus

                                                           
Query: 166 ttttttgaataagacgaacggtcaaacatgtgc-taaaaagtcaacgg 212
           ||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 50  ttttttgaataagacgaacggtcaaacatgtgcttaaaatgtcaacgg 3




>45954_miR806:micropc
          Length = 188

 Score =  153 bits (77), Expect = 7e-38
 Identities = 122/137 (89%)
 Strand = Plus / Plus

                                                                       
Query: 78  ttaagtaattatttattctttttatatcatttgattcattgttaaatatactttcatgta 137
           ||||||||||||| ||||||||  |||||||||||||||||||||||||| ||||||| |
Sbjct: 52  ttaagtaattattaattcttttcctatcatttgattcattgttaaatatattttcatgca 111

                                                                       
Query: 138 cacatgtagttttacatatttcactaacttttttgaataagacgaacggtcaaacatgtg 197
             ||| || ||||||||||||||| ||  ||||||||||||| ||||||| ||| |||||
Sbjct: 112 ggcatataattttacatatttcacaaaagtttttgaataagatgaacggttaaatatgtg 171

                            
Query: 198 ctaaaaagtcaacggtg 214
           |||||||||||||||||
Sbjct: 172 ctaaaaagtcaacggtg 188



 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 46/48 (95%), Gaps = 1/48 (2%)
 Strand = Plus / Minus

                                                           
Query: 166 ttttttgaataagacgaacggtcaaacatgtgc-taaaaagtcaacgg 212
           ||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 50  ttttttgaataagacgaacggtcaaacatgtgcttaaaatgtcaacgg 3




>46748_miR806:micropc
          Length = 187

 Score =  107 bits (54), Expect = 4e-24
 Identities = 87/98 (88%)
 Strand = Plus / Minus

                                                                       
Query: 106 atttgattcattgttaaatatactttcatgtacacatgtagttttacatatttcactaac 165
           |||||||||||||||||||||||||| ||| | || | ||||||||||||||| || || 
Sbjct: 109 atttgattcattgttaaatatacttttatgcatacgtatagttttacatattttacaaaa 50

                                                 
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaa 203
            ||||||||||||| ||||||||||||||||| |||||
Sbjct: 49  gtttttgaataagatgaacggtcaaacatgtgttaaaa 12



 Score = 81.8 bits (41), Expect = 2e-16
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 166 ttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtg 214
           ||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 139 ttttttgaataagacgagcggtcaaacatgtgctaaaaagtcaatggtg 187




>46381_miR1884:micropc
          Length = 204

 Score = 40.1 bits (20), Expect = 8e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 168 ttttgaataagacgaacggtcaaa 191
           |||||||||||||||| |||||||
Sbjct: 149 ttttgaataagacgaatggtcaaa 172