miRNEST 2.0, an integrative microRNA resource :: BLAST
>46603_miR806:micropc
Length = 188
Score = 278 bits (140), Expect = 2e-75
Identities = 177/188 (94%), Gaps = 1/188 (0%)
Strand = Plus / Plus
Query: 40 cgccgttgactttttat-catatgtttgaccgttcgtcttattcaaaaaatttaagtaat 98
|||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaat 60
Query: 99 tattaattcttttcctatcatttgattcattgttaaatatatttttatgtaggcatataa 158
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 61 tattaattcttttcctatcatttgattcattgttaaatatattttcatgcaggcatataa 120
Query: 159 ttttacatatctcacaaaagtttttgaataagacgaatggtcaaacatgtgctaaaaagt 218
|||||||||| |||||||||||||||||||||| ||| ||| ||| ||||||||||||||
Sbjct: 121 ttttacatatttcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagt 180
Query: 219 caacggtg 226
||||||||
Sbjct: 181 caacggtg 188
Score = 61.9 bits (31), Expect = 2e-10
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 179 tttttgaataagacgaatggtcaaacatgtgc-taaaaagtcaacgg 224
||||||||||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 49 tttttgaataagacgaacggtcaaacatgtgcttaaaatgtcaacgg 3
Score = 52.0 bits (26), Expect = 2e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 42 ccgttgactttttatcatatgtttgaccgttcgtcttattcaaaaa 87
|||||||||||||| || || ||| ||||||| |||||||||||||
Sbjct: 186 ccgttgactttttagcacatatttaaccgttcatcttattcaaaaa 141
>46529_miR806:micropc
Length = 188
Score = 278 bits (140), Expect = 2e-75
Identities = 177/188 (94%), Gaps = 1/188 (0%)
Strand = Plus / Plus
Query: 40 cgccgttgactttttat-catatgtttgaccgttcgtcttattcaaaaaatttaagtaat 98
|||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaat 60
Query: 99 tattaattcttttcctatcatttgattcattgttaaatatatttttatgtaggcatataa 158
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 61 tattaattcttttcctatcatttgattcattgttaaatatattttcatgcaggcatataa 120
Query: 159 ttttacatatctcacaaaagtttttgaataagacgaatggtcaaacatgtgctaaaaagt 218
|||||||||| |||||||||||||||||||||| ||| ||| ||| ||||||||||||||
Sbjct: 121 ttttacatatttcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagt 180
Query: 219 caacggtg 226
||||||||
Sbjct: 181 caacggtg 188
Score = 61.9 bits (31), Expect = 2e-10
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 179 tttttgaataagacgaatggtcaaacatgtgc-taaaaagtcaacgg 224
||||||||||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 49 tttttgaataagacgaacggtcaaacatgtgcttaaaatgtcaacgg 3
Score = 52.0 bits (26), Expect = 2e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 42 ccgttgactttttatcatatgtttgaccgttcgtcttattcaaaaa 87
|||||||||||||| || || ||| ||||||| |||||||||||||
Sbjct: 186 ccgttgactttttagcacatatttaaccgttcatcttattcaaaaa 141
>45954_miR806:micropc
Length = 188
Score = 278 bits (140), Expect = 2e-75
Identities = 177/188 (94%), Gaps = 1/188 (0%)
Strand = Plus / Plus
Query: 40 cgccgttgactttttat-catatgtttgaccgttcgtcttattcaaaaaatttaagtaat 98
|||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgccgttgacattttaagcacatgtttgaccgttcgtcttattcaaaaaatttaagtaat 60
Query: 99 tattaattcttttcctatcatttgattcattgttaaatatatttttatgtaggcatataa 158
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 61 tattaattcttttcctatcatttgattcattgttaaatatattttcatgcaggcatataa 120
Query: 159 ttttacatatctcacaaaagtttttgaataagacgaatggtcaaacatgtgctaaaaagt 218
|||||||||| |||||||||||||||||||||| ||| ||| ||| ||||||||||||||
Sbjct: 121 ttttacatatttcacaaaagtttttgaataagatgaacggttaaatatgtgctaaaaagt 180
Query: 219 caacggtg 226
||||||||
Sbjct: 181 caacggtg 188
Score = 61.9 bits (31), Expect = 2e-10
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 179 tttttgaataagacgaatggtcaaacatgtgc-taaaaagtcaacgg 224
||||||||||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 49 tttttgaataagacgaacggtcaaacatgtgcttaaaatgtcaacgg 3
Score = 52.0 bits (26), Expect = 2e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 42 ccgttgactttttatcatatgtttgaccgttcgtcttattcaaaaa 87
|||||||||||||| || || ||| ||||||| |||||||||||||
Sbjct: 186 ccgttgactttttagcacatatttaaccgttcatcttattcaaaaa 141
>46748_miR806:micropc
Length = 187
Score = 196 bits (99), Expect = 6e-51
Identities = 153/171 (89%)
Strand = Plus / Minus
Query: 45 ttgactttttatcatatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaa 104
||||||||||| || ||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 182 ttgactttttagcacatgtttgaccgctcgtcttattcaaaaaatttaaataattattat 123
Query: 105 ttcttttcctatcatttgattcattgttaaatatatttttatgtaggcatataattttac 164
|| ||||||||| |||||||||||||||||||||| ||||||| | | |||| ||||||
Sbjct: 122 tttttttcctataatttgattcattgttaaatatacttttatgcatacgtatagttttac 63
Query: 165 atatctcacaaaagtttttgaataagacgaatggtcaaacatgtgctaaaa 215
|||| | |||||||||||||||||||| ||| ||||||||||||| |||||
Sbjct: 62 atattttacaaaagtttttgaataagatgaacggtcaaacatgtgttaaaa 12
Score = 71.9 bits (36), Expect = 2e-13
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 179 tttttgaataagacgaatggtcaaacatgtgctaaaaagtcaacggtg 226
|||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 140 tttttgaataagacgagcggtcaaacatgtgctaaaaagtcaatggtg 187
Score = 50.1 bits (25), Expect = 9e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 51 ttttatcatatgtttgaccgttcgtcttattcaaaaa 87
||||| || |||||||||||||| |||||||||||||
Sbjct: 12 ttttaacacatgtttgaccgttcatcttattcaaaaa 48
>46381_miR1884:micropc
Length = 204
Score = 48.1 bits (24), Expect = 4e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 180 ttttgaataagacgaatggtcaaa 203
||||||||||||||||||||||||
Sbjct: 149 ttttgaataagacgaatggtcaaa 172
Score = 44.1 bits (22), Expect = 6e-05
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Minus
Query: 45 ttgactttttatcatatgtttgaccgttcgtcttattcaaaa 86
|||||||||||||| | ||||||| ||||||||||||||||
Sbjct: 189 ttgactttttatcaact-tttgaccattcgtcttattcaaaa 149
Score = 40.1 bits (20), Expect = 9e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 31 aatgtttaacgccgttgacttttt 54
||||| ||||||||||||||||||
Sbjct: 1 aatgtataacgccgttgacttttt 24
