miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46423_miR812:micropc
          Length = 158

 Score = 73.8 bits (37), Expect = 5e-14
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                       
Query: 58  cgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatg 117
           |||||||| ||||| |||||||| |||  |||||| |||||| ||| |||| ||||||||
Sbjct: 140 cgtcttatatgaaatttttttataattcgtattttcattgttgttagatgaaaaaacatg 81

                                
Query: 118 aatagtattttatgtgtgact 138
           | || ||||||||||||||||
Sbjct: 80  attaatattttatgtgtgact 60




>46199_miR812:micropc
          Length = 158

 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                       
Query: 153 ttttcataaatttttcaaataagacggacggttaaacgttggac 196
           ||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 115 ttttcataattttttcaaataagacggacggtcaaacgttggac 158



 Score = 69.9 bits (35), Expect = 8e-13
 Identities = 77/91 (84%)
 Strand = Plus / Plus

                                                                       
Query: 48  tttgatcgttcgtcttatttgaaaattttttatgattactatttttattgttattacatg 107
           |||||| || |||||||| ||||  |||||||| |||  |||||| |||||| ||| |||
Sbjct: 8   tttgattgtccgtcttatatgaattttttttataattcgtattttcattgttgttagatg 67

                                          
Query: 108 ataaaacatgaatagtattttatgtgtgact 138
           ||||||||||| || ||||||||| ||||||
Sbjct: 68  ataaaacatgattaatattttatgcgtgact 98



 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 41  tccaaagtttgatcgttcgtcttatttgaaaa 72
           ||||| |||||| ||| |||||||||||||||
Sbjct: 157 tccaacgtttgaccgtccgtcttatttgaaaa 126




>46334_miR812:micropc
          Length = 163

 Score = 67.9 bits (34), Expect = 3e-12
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                       
Query: 73  ttttttatgattactatttttattgttattacatgataaaacatgaatagtattttatgt 132
           ||||||||||||| ||||||||||| ||| | || |||||||||||||| || |||||| 
Sbjct: 36  ttttttatgattagtatttttattgctataagataataaaacatgaataatactttatga 95

                 
Query: 133 gtgact 138
           ||||||
Sbjct: 96  gtgact 101




>46616_miR812:micropc
          Length = 154

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                       
Query: 58  cgtcttatttgaaaattttttatgattactatttttattgttattacatgataaaacatg 117
           |||||||| ||||| |||||||| |||  ||||||||||||| ||| |||||||||||||
Sbjct: 136 cgtcttatatgaaatttttttataattcgtatttttattgttgttagatgataaaacatg 77

            
Query: 118 a 118
           |
Sbjct: 76  a 76



 Score = 44.1 bits (22), Expect = 5e-05
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 153 ttttcataaatttttcaaataagacggacggttaaacgttgg 194
           |||| |||| |||||||||||| ||||||||| |||| ||||
Sbjct: 42  tttttataattttttcaaataaaacggacggtcaaacattgg 1




>46048_miR1439:micropc
          Length = 58

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 2  cctccgtcccaaaataagtg 21
          ||||||||||||||||||||
Sbjct: 51 cctccgtcccaaaataagtg 32