miRNEST 2.0, an integrative microRNA resource :: BLAST
>46094_miR444:micropc
Length = 151
Score = 299 bits (151), Expect = 9e-82
Identities = 151/151 (100%)
Strand = Plus / Plus
Query: 23 gcaccgagcatgaggcaacaactgcattacttgcggggaaggcgcaagtaggacacctgc 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaccgagcatgaggcaacaactgcattacttgcggggaaggcgcaagtaggacacctgc 60
Query: 83 attacttgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttcttgca 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attacttgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttcttgca 120
Query: 143 agtcatgcagttgctgcctcaagcttgctgc 173
|||||||||||||||||||||||||||||||
Sbjct: 121 agtcatgcagttgctgcctcaagcttgctgc 151
>45904_miR444:micropc
Length = 141
Score = 280 bits (141), Expect = 9e-76
Identities = 141/141 (100%)
Strand = Plus / Plus
Query: 28 gagcatgaggcaacaactgcattacttgcggggaaggcgcaagtaggacacctgcattac 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagcatgaggcaacaactgcattacttgcggggaaggcgcaagtaggacacctgcattac 60
Query: 88 ttgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttcttgcaagtca 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttcttgcaagtca 120
Query: 148 tgcagttgctgcctcaagctt 168
|||||||||||||||||||||
Sbjct: 121 tgcagttgctgcctcaagctt 141
>46601_miR444:micropc
Length = 151
Score = 212 bits (107), Expect = 2e-55
Identities = 140/151 (92%)
Strand = Plus / Plus
Query: 23 gcaccgagcatgaggcaacaactgcattacttgcggggaaggcgcaagtaggacacctgc 82
||||| |||||||||||||||||||| |||||| ||||||||| ||||||||||||| |
Sbjct: 1 gcaccaagcatgaggcaacaactgcagtacttgtggggaaggcacaagtaggacaccaac 60
Query: 83 attacttgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttcttgca 142
||||| ||||| |||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 61 attacctgcaagcaagacgcaaaattaatagaacatcaccatacttgtggctttcttgca 120
Query: 143 agtcatgcagttgctgcctcaagcttgctgc 173
|||| ||||||||||||||||||||||||||
Sbjct: 121 agtcgtgcagttgctgcctcaagcttgctgc 151
>45144_miR444:micropc
Length = 151
Score = 212 bits (107), Expect = 2e-55
Identities = 140/151 (92%)
Strand = Plus / Plus
Query: 23 gcaccgagcatgaggcaacaactgcattacttgcggggaaggcgcaagtaggacacctgc 82
||||| |||||||||||||||||||| |||||| ||||||||| ||||||||||||| |
Sbjct: 1 gcaccaagcatgaggcaacaactgcagtacttgtggggaaggcacaagtaggacaccaac 60
Query: 83 attacttgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttcttgca 142
||||| ||||| |||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 61 attacctgcaagcaagacgcaaaattaatagaacatcaccatacttgtggctttcttgca 120
Query: 143 agtcatgcagttgctgcctcaagcttgctgc 173
|||| ||||||||||||||||||||||||||
Sbjct: 121 agtcgtgcagttgctgcctcaagcttgctgc 151
>46182_miR444:micropc
Length = 144
Score = 198 bits (100), Expect = 3e-51
Identities = 130/140 (92%)
Strand = Plus / Plus
Query: 29 agcatgaggcaacaactgcattacttgcggggaaggcgcaagtaggacacctgcattact 88
|||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||||
Sbjct: 5 agcatgaggcaacaactgcagtacttgtggggaaggcacaagtaggacaccaacattacc 64
Query: 89 tgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttcttgcaagtcat 148
||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 65 tgcaagcaagacgcaaaattaatagaacatcaccatacttgtggctttcttgcaagtcgt 124
Query: 149 gcagttgctgcctcaagctt 168
||||||||||||||||||||
Sbjct: 125 gcagttgctgcctcaagctt 144
>44855_miR444:micropc
Length = 144
Score = 198 bits (100), Expect = 3e-51
Identities = 130/140 (92%)
Strand = Plus / Plus
Query: 29 agcatgaggcaacaactgcattacttgcggggaaggcgcaagtaggacacctgcattact 88
|||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||||||
Sbjct: 5 agcatgaggcaacaactgcagtacttgtggggaaggcacaagtaggacaccaacattacc 64
Query: 89 tgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttcttgcaagtcat 148
||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 65 tgcaagcaagacgcaaaattaatagaacatcaccatacttgtggctttcttgcaagtcgt 124
Query: 149 gcagttgctgcctcaagctt 168
||||||||||||||||||||
Sbjct: 125 gcagttgctgcctcaagctt 144
>46197_miR444:micropc
Length = 95
Score = 188 bits (95), Expect = 2e-48
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 51 acttgcggggaaggcgcaagtaggacacctgcattacttgcaaacaaggcgcaaaattaa 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttgcggggaaggcgcaagtaggacacctgcattacttgcaaacaaggcgcaaaattaa 60
Query: 111 tagaagatcaccatacttgtggctttcttgcaagt 145
|||||||||||||||||||||||||||||||||||
Sbjct: 61 tagaagatcaccatacttgtggctttcttgcaagt 95
>45055_miR444:micropc
Length = 95
Score = 125 bits (63), Expect = 3e-29
Identities = 87/95 (91%)
Strand = Plus / Plus
Query: 51 acttgcggggaaggcgcaagtaggacacctgcattacttgcaaacaaggcgcaaaattaa 110
||||| ||||||||| ||||||||||||| |||||| ||||| |||| |||||||||||
Sbjct: 1 acttgtggggaaggcacaagtaggacaccaacattacctgcaagcaagacgcaaaattaa 60
Query: 111 tagaagatcaccatacttgtggctttcttgcaagt 145
||||| |||||||||||||||||||||||||||||
Sbjct: 61 tagaacatcaccatacttgtggctttcttgcaagt 95
>45665_miR444:micropc
Length = 111
Score = 85.7 bits (43), Expect = 3e-17
Identities = 82/95 (86%), Gaps = 5/95 (5%)
Strand = Plus / Plus
Query: 79 ctgcattacttgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttct 138
||||||||||||||| ||||| |||||| | |||| ||| |||||||||||||||
Sbjct: 22 ctgcattacttgcaagaaaggcacaaaatcattagatgat-----tacttgtggctttct 76
Query: 139 tgcaagtcatgcagttgctgcctcaagcttgctgc 173
||||||| ||||||||||||||||||||||||||
Sbjct: 77 tgcaagttgtgcagttgctgcctcaagcttgctgc 111
Score = 60.0 bits (30), Expect = 2e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 23 gcaccgagcatgaggcaacaactgcattacttgc 56
||||| ||||||||||||||||||||||||||||
Sbjct: 1 gcaccaagcatgaggcaacaactgcattacttgc 34
Score = 54.0 bits (27), Expect = 9e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 127 ttgtggctttcttgcaagtcatgcagttgctgcctcaagcttg 169
||||| ||||||||||||| ||||||||| ||||||| |||||
Sbjct: 47 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttg 5
>45334_miR444:micropc
Length = 101
Score = 75.8 bits (38), Expect = 3e-14
Identities = 77/90 (85%), Gaps = 5/90 (5%)
Strand = Plus / Plus
Query: 79 ctgcattacttgcaaacaaggcgcaaaattaatagaagatcaccatacttgtggctttct 138
||||||||||||||| ||||| |||||| | |||| ||| |||||||||||||||
Sbjct: 17 ctgcattacttgcaagaaaggcacaaaatcattagatgat-----tacttgtggctttct 71
Query: 139 tgcaagtcatgcagttgctgcctcaagctt 168
||||||| |||||||||||||||||||||
Sbjct: 72 tgcaagttgtgcagttgctgcctcaagctt 101
Score = 56.0 bits (28), Expect = 2e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 29 agcatgaggcaacaactgcattacttgc 56
||||||||||||||||||||||||||||
Sbjct: 2 agcatgaggcaacaactgcattacttgc 29
Score = 52.0 bits (26), Expect = 4e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 127 ttgtggctttcttgcaagtcatgcagttgctgcctcaagctt 168
||||| ||||||||||||| ||||||||| ||||||| ||||
Sbjct: 42 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgctt 1
>46669_miR444:micropc
Length = 136
Score = 73.8 bits (37), Expect = 1e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 120 accatacttgtggctttcttgcaagtcatgcagttgctgcctcaagctt 168
|||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 88 accatacttgtggctttcttgcaagttgtgcagttgttgcctcaagctt 136
Score = 54.0 bits (27), Expect = 9e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 126 cttgtggctttcttgcaagtcatgcagttgctgcctcaagctt 168
|||||| ||||||||||||| |||||||| |||||||| ||||
Sbjct: 43 cttgtgactttcttgcaagtaatgcagttcctgcctcatgctt 1
>46544_miR444:micropc
Length = 136
Score = 73.8 bits (37), Expect = 1e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 120 accatacttgtggctttcttgcaagtcatgcagttgctgcctcaagctt 168
|||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 88 accatacttgtggctttcttgcaagttgtgcagttgttgcctcaagctt 136
Score = 54.0 bits (27), Expect = 9e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 126 cttgtggctttcttgcaagtcatgcagttgctgcctcaagctt 168
|||||| ||||||||||||| |||||||| |||||||| ||||
Sbjct: 43 cttgtgactttcttgcaagtaatgcagttcctgcctcatgctt 1
>45742_miR444:micropc
Length = 103
Score = 61.9 bits (31), Expect = 4e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 122 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagctt 168
||||||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 57 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 103
Score = 52.0 bits (26), Expect = 4e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 127 ttgtggctttcttgcaagtcatgcagttgctgcctcaagctt 168
||||| ||||||||||||| |||||||| |||||||| ||||
Sbjct: 42 ttgtgactttcttgcaagtaatgcagttcctgcctcatgctt 1
>45712_miR444:micropc
Length = 103
Score = 61.9 bits (31), Expect = 4e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 122 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagctt 168
||||||||||| |||||||||||| |||||||| ||||||||||||
Sbjct: 57 catacttgtggttttcttgcaagttgtgcagttgttgcctcaagctt 103
Score = 52.0 bits (26), Expect = 4e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 127 ttgtggctttcttgcaagtcatgcagttgctgcctcaagctt 168
||||| ||||||||||||| |||||||| |||||||| ||||
Sbjct: 42 ttgtgactttcttgcaagtaatgcagttcctgcctcatgctt 1
>46185_miR444:micropc
Length = 108
Score = 58.0 bits (29), Expect = 6e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcc 174
|||||||||||| ||||||||||| |||||||||||||||
Sbjct: 68 tttcttgcaagttgtgcagttgctgtctcaagcttgctgcc 108
Score = 48.1 bits (24), Expect = 6e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttg 169
||||||||||| |||||||||||||||| ||||||
Sbjct: 41 tttcttgcaagatatgcagttgctgcctctagcttg 6
>45451_miR444:micropc
Length = 110
Score = 58.0 bits (29), Expect = 6e-09
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcc 174
||||||||||| |||||||||||||||| |||||||||||
Sbjct: 41 tttcttgcaaggtatgcagttgctgcctctagcttgctgcc 1
Score = 50.1 bits (25), Expect = 1e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcc 174
|||||||||||| |||||||| || |||||||||||||||
Sbjct: 70 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 110
>45168_miR444:micropc
Length = 110
Score = 58.0 bits (29), Expect = 6e-09
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcc 174
||||||||||| |||||||||||||||| |||||||||||
Sbjct: 41 tttcttgcaaggtatgcagttgctgcctctagcttgctgcc 1
Score = 50.1 bits (25), Expect = 1e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcc 174
|||||||||||| |||||||| || |||||||||||||||
Sbjct: 70 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 110
>44872_miR444:micropc
Length = 106
Score = 56.0 bits (28), Expect = 2e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgc 173
|||||||||||| ||||||||||| ||||||||||||||
Sbjct: 67 tttcttgcaagttgtgcagttgctgtctcaagcttgctgc 106
Score = 48.1 bits (24), Expect = 6e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttg 169
||||||||||| |||||||||||||||| ||||||
Sbjct: 40 tttcttgcaagatatgcagttgctgcctctagcttg 5
>46519_miR444:micropc
Length = 59
Score = 52.0 bits (26), Expect = 4e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 120 accatacttgtggctttcttgcaagt 145
||||||||||||||||||||||||||
Sbjct: 32 accatacttgtggctttcttgcaagt 57
>46412_miR444:micropc
Length = 103
Score = 52.0 bits (26), Expect = 4e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 29 agcatgaggcaacaactgcattactt 54
||||||||||||||||||||||||||
Sbjct: 102 agcatgaggcaacaactgcattactt 77
Score = 48.1 bits (24), Expect = 6e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 133 ctttcttgcaagtcatgcagttgctgcctcaagctt 168
||||||||||||| ||||||||||| |||||||||
Sbjct: 36 ctttcttgcaagttgtgcagttgctgtctcaagctt 1
>45278_miR444:micropc
Length = 59
Score = 52.0 bits (26), Expect = 4e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 120 accatacttgtggctttcttgcaagt 145
||||||||||||||||||||||||||
Sbjct: 32 accatacttgtggctttcttgcaagt 57
>45828_miR444:micropc
Length = 114
Score = 50.1 bits (25), Expect = 1e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcc 174
|||||||||||| |||||||| || |||||||||||||||
Sbjct: 74 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 114
>45238_miR444:micropc
Length = 108
Score = 50.1 bits (25), Expect = 1e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcc 174
|||||||||||| |||||||| || |||||||||||||||
Sbjct: 68 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
Score = 48.1 bits (24), Expect = 6e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttg 169
||||||||||| |||||||||||||||| ||||||
Sbjct: 41 tttcttgcaagatatgcagttgctgcctctagcttg 6
>46570_miR444:micropc
Length = 173
Score = 48.1 bits (24), Expect = 6e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 122 catacttgtggctttcttgcaagt 145
||||||||||||||||||||||||
Sbjct: 148 catacttgtggctttcttgcaagt 171
>46299_miR444:micropc
Length = 103
Score = 48.1 bits (24), Expect = 6e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 29 agcatgaggcaacaactgcattacttgc 56
|||||||||| |||||||||||||||||
Sbjct: 2 agcatgaggcgacaactgcattacttgc 29
>45976_miR444:micropc
Length = 133
Score = 48.1 bits (24), Expect = 6e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 133 ctttcttgcaagtcatgcagttgctgcctcaagctt 168
||||||||||||| |||||||| ||||||||||||
Sbjct: 98 ctttcttgcaagttgtgcagttgttgcctcaagctt 133
>45960_miR444:micropc
Length = 103
Score = 48.1 bits (24), Expect = 6e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 29 agcatgaggcaacaactgcattacttgc 56
|||||||||| |||||||||||||||||
Sbjct: 2 agcatgaggcgacaactgcattacttgc 29
>45226_miR444:micropc
Length = 60
Score = 48.1 bits (24), Expect = 6e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 122 catacttgtggctttcttgcaagt 145
||||||||||||||||||||||||
Sbjct: 35 catacttgtggctttcttgcaagt 58
>45131_miR444:micropc
Length = 108
Score = 48.1 bits (24), Expect = 6e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttg 169
||||||||||| |||||||||||||||| ||||||
Sbjct: 41 tttcttgcaagatatgcagttgctgcctctagcttg 6
Score = 44.1 bits (22), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcc 174
||||||||| || |||||||| || |||||||||||||||
Sbjct: 68 tttcttgcangttgtgcagttgttgtctcaagcttgctgcc 108
>45562_miR444:micropc
Length = 96
Score = 46.1 bits (23), Expect = 2e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagctt 168
||||||||||| |||||||||||||||| |||||
Sbjct: 35 tttcttgcaagatatgcagttgctgcctctagctt 1
Score = 46.1 bits (23), Expect = 2e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagctt 168
|||||||||||| ||||||||||| |||||||||
Sbjct: 62 tttcttgcaagttgtgcagttgctgtctcaagctt 96
>45230_miR444:micropc
Length = 96
Score = 46.1 bits (23), Expect = 2e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagctt 168
||||||||||| |||||||||||||||| |||||
Sbjct: 35 tttcttgcaagatatgcagttgctgcctctagctt 1
>45175_miR444:micropc
Length = 98
Score = 46.1 bits (23), Expect = 2e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagctt 168
||||||||||| |||||||||||||||| |||||
Sbjct: 64 tttcttgcaaggtatgcagttgctgcctctagctt 98
>45135_miR444:micropc
Length = 96
Score = 46.1 bits (23), Expect = 2e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagctt 168
||||||||||| |||||||||||||||| |||||
Sbjct: 35 tttcttgcaagatatgcagttgctgcctctagctt 1
>45024_miR444:micropc
Length = 96
Score = 46.1 bits (23), Expect = 2e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagctt 168
||||||||||| |||||||||||||||| |||||
Sbjct: 62 tttcttgcaagatatgcagttgctgcctctagctt 96
>45525_miR444:micropc
Length = 94
Score = 44.1 bits (22), Expect = 9e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 134 tttcttgcaagtcatgcagttgctgcctcaagct 167
||||||||||| |||||||||||||||| ||||
Sbjct: 61 tttcttgcaagatatgcagttgctgcctctagct 94
>45001_miR444:micropc
Length = 57
Score = 44.1 bits (22), Expect = 9e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 124 tacttgtggctttcttgcaagt 145
||||||||||||||||||||||
Sbjct: 34 tacttgtggctttcttgcaagt 55
