miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>45994_miR1436:micropc
          Length = 162

 Score =  139 bits (70), Expect = 1e-33
 Identities = 92/98 (93%), Gaps = 1/98 (1%)
 Strand = Plus / Minus

                                                                       
Query: 150 tataagtctttttagagattccactacaa-actacatacggatgtatatagacatatttt 208
           |||||||||||||||||||||||||| |  |||||||||||||||||||||||||| |||
Sbjct: 144 tataagtctttttagagattccactagaggactacatacggatgtatatagacatacttt 85

                                                 
Query: 209 agagtgtagattcactcattttacttcgtatgtagtcc 246
           |||||||||||||||||||||| ||| |||||||||||
Sbjct: 84  agagtgtagattcactcattttgctttgtatgtagtcc 47




>46678_miR1122:micropc
          Length = 55

 Score =  109 bits (55), Expect = 1e-24
 Identities = 55/55 (100%)
 Strand = Plus / Plus

                                                                  
Query: 61  tctaaatacgtatgtatcaagtcatgttttagtattagatacatccgtatctaga 115
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tctaaatacgtatgtatcaagtcatgttttagtattagatacatccgtatctaga 55




>46006_miR1122:micropc
          Length = 55

 Score =  109 bits (55), Expect = 1e-24
 Identities = 55/55 (100%)
 Strand = Plus / Plus

                                                                  
Query: 61  tctaaatacgtatgtatcaagtcatgttttagtattagatacatccgtatctaga 115
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tctaaatacgtatgtatcaagtcatgttttagtattagatacatccgtatctaga 55




>45436_miR1122:micropc
          Length = 55

 Score =  109 bits (55), Expect = 1e-24
 Identities = 55/55 (100%)
 Strand = Plus / Plus

                                                                  
Query: 61  tctaaatacgtatgtatcaagtcatgttttagtattagatacatccgtatctaga 115
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tctaaatacgtatgtatcaagtcatgttttagtattagatacatccgtatctaga 55




>45109_miR1122:micropc
          Length = 55

 Score =  109 bits (55), Expect = 1e-24
 Identities = 55/55 (100%)
 Strand = Plus / Plus

                                                                  
Query: 61  tctaaatacgtatgtatcaagtcatgttttagtattagatacatccgtatctaga 115
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tctaaatacgtatgtatcaagtcatgttttagtattagatacatccgtatctaga 55




>45091_miR1122:micropc
          Length = 55

 Score =  109 bits (55), Expect = 1e-24
 Identities = 55/55 (100%)
 Strand = Plus / Plus

                                                                  
Query: 61  tctaaatacgtatgtatcaagtcatgttttagtattagatacatccgtatctaga 115
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tctaaatacgtatgtatcaagtcatgttttagtattagatacatccgtatctaga 55




>46814_miR1122:micropc
          Length = 55

 Score = 85.7 bits (43), Expect = 2e-17
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                  
Query: 61  tctaaatacgtatgtatcaagtcatgttttagtattagatacatccgtatctaga 115
           |||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 1   tctaaatacggatgtatcaagtcacgttttagtattagatacatccatatctaga 55




>45977_miR1122:micropc
          Length = 55

 Score = 85.7 bits (43), Expect = 2e-17
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                  
Query: 61  tctaaatacgtatgtatcaagtcatgttttagtattagatacatccgtatctaga 115
           |||||||||| ||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 1   tctaaatacggatgtatcaagtcacgttttagtattagatacacccgtatctaga 55




>45049_miR1126:micropc
          Length = 86

 Score = 73.8 bits (37), Expect = 7e-14
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                       
Query: 179 actacatacggatgtatatagacatattttagagtgtagattcactcattttacttcgta 238
           |||||||||||||||||||||||||| | ||||||||| | |||||| |||| || ||||
Sbjct: 11  actacatacggatgtatatagacatactgtagagtgtacaatcactcgttttgctccgta 70

                        
Query: 239 tgtagtccatagt 251
           ||| |||| ||||
Sbjct: 71  tgttgtccgtagt 83



 Score = 40.1 bits (20), Expect = 0.001
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 cgtatgtagtccatagtgga 254
           ||||||||||||||||||||
Sbjct: 20  cgtatgtagtccatagtgga 1




>44799_miR1126:micropc
          Length = 86

 Score = 65.9 bits (33), Expect = 2e-11
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                       
Query: 182 acatacggatgtatatagacatattttagagtgtagattcactcattttacttcgtatgt 241
           ||||||| |||||| ||||   ||||||||||||||||||| | ||||| || |||| ||
Sbjct: 73  acatacgaatgtatgtagatgcattttagagtgtagattcatttattttgctccgtaagt 14

                        
Query: 242 agtccatagtgga 254
           |||||||||||||
Sbjct: 13  agtccatagtgga 1




>45925_miR1122:micropc
          Length = 52

 Score = 44.1 bits (22), Expect = 6e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 86  gttttagtattagatacatccgtatctaga 115
           |||||||| ||||||||||| |||||||||
Sbjct: 23  gttttagtgttagatacatctgtatctaga 52