miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>44799_miR1126:micropc
          Length = 86

 Score =  163 bits (82), Expect = 5e-41
 Identities = 85/86 (98%)
 Strand = Plus / Plus

                                                                       
Query: 40  tccactatggactacatacggagcaaaataaatgaatctacactctaaaatgcatctaca 99
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tccactatggactacttacggagcaaaataaatgaatctacactctaaaatgcatctaca 60

                                     
Query: 100 tacattcgtatgtggttcatagtaaa 125
           ||||||||||||||||||||||||||
Sbjct: 61  tacattcgtatgtggttcatagtaaa 86




>45994_miR1436:micropc
          Length = 162

 Score = 65.9 bits (33), Expect = 9e-12
 Identities = 128/157 (81%), Gaps = 2/157 (1%)
 Strand = Plus / Plus

                                                                       
Query: 8   ctccgttcctaaatataagtctttatagaaattccactat-ggactacatacggagcaaa 66
           ||||||| ||||||||||||||||  ||  ||| | |||  |||||||||||  ||||||
Sbjct: 6   ctccgtttctaaatataagtcttttaagcgatttctctaaaggactacatacaaagcaaa 65

                                                                       
Query: 67  ataaatgaatctacactctaaaatgcatctacatacattcgtatgtggttc-atagtaaa 125
           || | ||||||||||||||||| |   |||| |||||| ||||||| || |  ||||  |
Sbjct: 66  atgagtgaatctacactctaaagtatgtctatatacatccgtatgtagtcctctagtgga 125

                                                
Query: 126 atctctacaaagacttatatttagaaacggagggagt 162
           ||||||| |||||||||||||  | ||||||||||||
Sbjct: 126 atctctaaaaagacttatattatggaacggagggagt 162



 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 53/60 (88%), Gaps = 1/60 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   actctctccgttcctaaatataagtctttatagaaattccacta-tggactacatacgga 61
           |||| |||||||||  ||||||||||||| |||| |||||||||  ||||||||||||||
Sbjct: 162 actccctccgttccataatataagtctttttagagattccactagaggactacatacgga 103



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 134 aaagacttatatttagaaacggagg 158
           |||||||||||||||||||||||||
Sbjct: 29  aaagacttatatttagaaacggagg 5




>45049_miR1126:micropc
          Length = 86

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 40 tccactatggactacatacgga 61
          ||||||||||||||||||||||
Sbjct: 1  tccactatggactacatacgga 22