miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45452_miR164:micropc
Length = 146
Score = 289 bits (146), Expect = 3e-79
Identities = 146/146 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcaattctaactcatcaacgcacgaatgaacccagagaatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgcaattctaactcatcaacgcacgaatgaacccagagaatca 60
Query: 61 ctttccttttctgcttttcaccaaccagattcatagattcctctttagttgcagtgagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctttccttttctgcttttcaccaaccagattcatagattcctctttagttgcagtgagtt 120
Query: 121 agtccttcatgtgcccctcttcccca 146
||||||||||||||||||||||||||
Sbjct: 121 agtccttcatgtgcccctcttcccca 146
>46763_miR164:micropc
Length = 102
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 115 tgagttagtccttcatgtgcccctcttcccca 146
||||||||| ||||||||||||||||||||||
Sbjct: 71 tgagttagttcttcatgtgcccctcttcccca 102
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcaattctaactcatcaac 37
||||||||||||||||||||| | |||||||| ||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactcaccaac 37
>46528_miR164:micropc
Length = 102
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 115 tgagttagtccttcatgtgcccctcttcccca 146
||||||||| ||||||||||||||||||||||
Sbjct: 71 tgagttagttcttcatgtgcccctcttcccca 102
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcaattctaactcatcaac 37
||||||||||||||||||||| | |||||||| ||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactcaccaac 37
>46101_miR164:micropc
Length = 137
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcaattctaactcat 33
||||||||||||||||||||| | |||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactcat 33
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 112 cagtgagttagtccttcatgtgcccctcttcccca 146
|||||||||||| ||||||||||| |||||||||
Sbjct: 103 cagtgagttagttcttcatgtgcctgtcttcccca 137
>46047_miR164:micropc
Length = 137
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcaattctaactcat 33
||||||||||||||||||||| | |||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactcat 33
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 112 cagtgagttagtccttcatgtgcccctcttcccca 146
|||||||||||| ||||||||||| |||||||||
Sbjct: 103 cagtgagttagttcttcatgtgcctgtcttcccca 137
>46647_miR164:micropc
Length = 168
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcaattctaactca 32
||||||||||||||||||||| | ||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactca 32
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 115 tgagttagtccttcatgtgcccctcttcccca 146
||||||| | |||||||||||| |||||||||
Sbjct: 137 tgagttatttcttcatgtgcccttcttcccca 168
>46639_miR164:micropc
Length = 168
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcaattctaactca 32
||||||||||||||||||||| | ||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactca 32
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 115 tgagttagtccttcatgtgcccctcttcccca 146
||||||| | |||||||||||| |||||||||
Sbjct: 137 tgagttatttcttcatgtgcccttcttcccca 168
>46445_miR164:micropc
Length = 168
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcaattctaactca 32
||||||||||||||||||||| | ||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactca 32
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 115 tgagttagtccttcatgtgcccctcttcccca 146
||||||| | |||||||||||| |||||||||
Sbjct: 137 tgagttatttcttcatgtgcccttcttcccca 168
>45465_miR164:micropc
Length = 168
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcaattctaactca 32
||||||||||||||||||||| | ||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactca 32
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 115 tgagttagtccttcatgtgcccctcttcccca 146
||||||| | |||||||||||| |||||||||
Sbjct: 137 tgagttatttcttcatgtgcccttcttcccca 168
>45324_miR164:micropc
Length = 168
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcaattctaactca 32
||||||||||||||||||||| | ||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactca 32
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 115 tgagttagtccttcatgtgcccctcttcccca 146
||||||| | |||||||||||| |||||||||
Sbjct: 137 tgagttatttcttcatgtgcccttcttcccca 168
>44832_miR164:micropc
Length = 168
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcaattctaactca 32
||||||||||||||||||||| | ||||||||
Sbjct: 1 tggagaagcagggcacgtgcattactaactca 32
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 115 tgagttagtccttcatgtgcccctcttcccca 146
||||||| | |||||||||||| |||||||||
Sbjct: 137 tgagttatttcttcatgtgcccttcttcccca 168
>45579_miR164:micropc
Length = 196
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgcaattctaactcatca 35
||||||||||||||||||| | | |||||||||||
Sbjct: 1 tggagaagcagggcacgtgtattactaactcatca 35
>45892_miR164:micropc
Length = 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgca 21
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>45738_miR164:micropc
Length = 152
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgca 21
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>45686_miR164:micropc
Length = 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgca 21
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>45583_miR164:micropc
Length = 90
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgca 21
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>45287_miR164:micropc
Length = 152
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgca 21
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>45052_miR164:micropc
Length = 152
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tggagaagcagggcacgtgca 21
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
