miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46109_miR157:micropc
Length = 78
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcaccaacgatgaagttgcaaactttgcatctcactcctttgtactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcaccaacgatgaagttgcaaactttgcatctcactcctttgtactc 63
Query: 61 tctatacttctg 72
||||||||||||
Sbjct: 64 tctatacttctg 75
>45887_miR157:micropc
Length = 79
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcaccaacgatgaagttgcaaactttgcatctcactcctttgtactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcaccaacgatgaagttgcaaactttgcatctcactcctttgtactc 64
Query: 61 tctatacttctg 72
||||||||||||
Sbjct: 65 tctatacttctg 76
>46830_miR157:micropc
Length = 81
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 39 tgcatctcactcctttgtactctctatacttctg 72
|||||||||||||||||| |||||||| ||||||
Sbjct: 45 tgcatctcactcctttgtgctctctatgcttctg 78
>46821_miR157:micropc
Length = 84
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 39 tgcatctcactcctttgtactctctatacttctg 72
|||||||||||||||||| |||||||| ||||||
Sbjct: 48 tgcatctcactcctttgtgctctctatgcttctg 81
>46687_miR156:micropc
Length = 74
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 39 tgcatctcactcctttgtactctctatacttctg 72
|||||||||||||||||| |||||||| ||||||
Sbjct: 41 tgcatctcactcctttgtgctctctatgcttctg 74
>46542_miR157:micropc
Length = 82
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 39 tgcatctcactcctttgtactctctatacttctg 72
|||||||||||||||||| |||||||| ||||||
Sbjct: 46 tgcatctcactcctttgtgctctctatgcttctg 79
>46407_miR156:micropc
Length = 75
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 39 tgcatctcactcctttgtactctctatacttctg 72
|||||||||||||||||| |||||||| ||||||
Sbjct: 42 tgcatctcactcctttgtgctctctatgcttctg 75
>45538_miR157:micropc
Length = 85
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 39 tgcatctcactcctttgtactctctatacttctg 72
|||||||||||||||||| |||||||| ||||||
Sbjct: 49 tgcatctcactcctttgtgctctctatgcttctg 82
>45460_miR157:micropc
Length = 81
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 39 tgcatctcactcctttgtactctctatacttctg 72
|||||||||||||||||| |||||||| ||||||
Sbjct: 45 tgcatctcactcctttgtgctctctatgcttctg 78
>45004_miR156:micropc
Length = 78
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 39 tgcatctcactcctttgtactctctatacttctg 72
|||||||||||||||||| |||||||| ||||||
Sbjct: 45 tgcatctcactcctttgtgctctctatgcttctg 78
>44822_miR157:micropc
Length = 80
Score = 52.0 bits (26), Expect = 5e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 39 tgcatctcactcctttgtactctctatacttctg 72
|||||||||||||||||| |||||||| ||||||
Sbjct: 44 tgcatctcactcctttgtgctctctatgcttctg 77
>46572_miR157:micropc
Length = 83
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 40 gcatctcactcctttgtactctcta 64
||||||||||||||||| |||||||
Sbjct: 48 gcatctcactcctttgtgctctcta 72
>44931_miR157:micropc
Length = 84
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 40 gcatctcactcctttgtactctcta 64
||||||||||||||||| |||||||
Sbjct: 49 gcatctcactcctttgtgctctcta 73
>44856_miR156:micropc
Length = 77
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 40 gcatctcactcctttgtactctcta 64
||||||||||||||||| |||||||
Sbjct: 45 gcatctcactcctttgtgctctcta 69
>46718_miR157:micropc
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 45 tcactcctttgtactctctatacttctg 72
|||||||||||| |||||||| ||||||
Sbjct: 54 tcactcctttgtgctctctatgcttctg 81
>46591_miR156:micropc
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 45 tcactcctttgtactctctatacttctg 72
|||||||||||| |||||||| ||||||
Sbjct: 51 tcactcctttgtgctctctatgcttctg 78
>45409_miR157:micropc
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 45 tcactcctttgtactctctatacttctg 72
|||||||||||| |||||||| ||||||
Sbjct: 55 tcactcctttgtgctctctatgcttctg 82
>46632_miR157:micropc
Length = 144
Score = 38.2 bits (19), Expect = 8e-04
Identities = 32/35 (91%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 39 tgcatctc-actcctttgtactctctatacttctg 72
|||||||| |||| ||||| |||||||||||||||
Sbjct: 107 tgcatctctactcttttgtgctctctatacttctg 141
>46252_miR157:micropc
Length = 146
Score = 38.2 bits (19), Expect = 8e-04
Identities = 32/35 (91%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 39 tgcatctc-actcctttgtactctctatacttctg 72
|||||||| |||| ||||| |||||||||||||||
Sbjct: 108 tgcatctctactcttttgtgctctctatacttctg 142
>45978_miR156:micropc
Length = 138
Score = 38.2 bits (19), Expect = 8e-04
Identities = 32/35 (91%), Gaps = 1/35 (2%)
Strand = Plus / Plus
Query: 39 tgcatctc-actcctttgtactctctatacttctg 72
|||||||| |||| ||||| |||||||||||||||
Sbjct: 104 tgcatctctactcttttgtgctctctatacttctg 138
