miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46676_miR162:micropc
Length = 97
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatcaattcctgtgaaaaatgatgttggaaacaatttacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatcaattcctgtgaaaaatgatgttggaaacaatttacat 60
Query: 61 ggcaagcatgaatcgatcgataaacctctgcatccag 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcaagcatgaatcgatcgataaacctctgcatccag 97
>46394_miR162:micropc
Length = 95
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatcaattcctgtgaaaaatgatgttggaaacaatttacatg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatcaattcctgtgaaaaatgatgttggaaacaatttacatg 60
Query: 62 gcaagcatgaatcgatcgataaacctctgcatcca 96
|||||||||||||||||||||||||||||||||||
Sbjct: 61 gcaagcatgaatcgatcgataaacctctgcatcca 95
>46364_miR162:micropc
Length = 95
Score = 188 bits (95), Expect = 5e-49
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatcaattcctgtgaaaaatgatgttggaaacaatttacatg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatcaattcctgtgaaaaatgatgttggaaacaatttacatg 60
Query: 62 gcaagcatgaatcgatcgataaacctctgcatcca 96
|||||||||||||||||||||||||||||||||||
Sbjct: 61 gcaagcatgaatcgatcgataaacctctgcatcca 95
>46817_miR162:micropc
Length = 93
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatccag 97
|||||||||||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatccag 93
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatca 24
||||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatca 24
>46549_miR162:micropc
Length = 92
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatccag 97
|||||||||||||||||||||||||||||||
Sbjct: 62 catgaatcgatcgataaacctctgcatccag 92
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatc 23
>46039_miR162:micropc
Length = 92
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatccag 97
|||||||||||||||||||||||||||||||
Sbjct: 62 catgaatcgatcgataaacctctgcatccag 92
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatc 23
>45545_miR162:micropc
Length = 91
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatccag 97
|||||||||||||||||||||||||||||||
Sbjct: 61 catgaatcgatcgataaacctctgcatccag 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatc 23
>46597_miR162:micropc
Length = 91
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatcca 96
||||||||||||||||||||||||||||||
Sbjct: 62 catgaatcgatcgataaacctctgcatcca 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatca 24
|||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatca 23
>46511_miR162:micropc
Length = 89
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatcca 96
||||||||||||||||||||||||||||||
Sbjct: 60 catgaatcgatcgataaacctctgcatcca 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatc 23
||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatc 22
>46504_miR162:micropc
Length = 90
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatcca 96
||||||||||||||||||||||||||||||
Sbjct: 61 catgaatcgatcgataaacctctgcatcca 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatc 23
||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatc 22
>45903_miR162:micropc
Length = 90
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatcca 96
||||||||||||||||||||||||||||||
Sbjct: 61 catgaatcgatcgataaacctctgcatcca 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatc 23
||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatc 22
>45991_miR162:micropc
Length = 108
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatccag 97
||||||||||||||||||||||||||||
Sbjct: 81 gaatcgatcgataaacctctgcatccag 108
>45901_miR162:micropc
Length = 111
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatccag 97
||||||||||||||||||||||||||||
Sbjct: 84 gaatcgatcgataaacctctgcatccag 111
>45749_miR162:micropc
Length = 99
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatccag 97
||||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccag 99
>46457_miR162:micropc
Length = 109
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatcca 96
|||||||||||||||||||||||||||
Sbjct: 83 gaatcgatcgataaacctctgcatcca 109
>46456_miR162:micropc
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatccag 97
|||||| ||||||||||||||||||||||||
Sbjct: 59 catgaaccgatcgataaacctctgcatccag 89
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 ggaggcagcggttcatcgatc 23
|||||||||||||||||||||
Sbjct: 4 ggaggcagcggttcatcgatc 24
>46090_miR162:micropc
Length = 97
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatcca 96
|||||||||||||||||||||||||||
Sbjct: 71 gaatcgatcgataaacctctgcatcca 97
>46026_miR162:micropc
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatccag 97
||||||||| |||||||||||||||||||||
Sbjct: 57 catgaatcggtcgataaacctctgcatccag 87
>45617_miR162:micropc
Length = 88
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatccag 97
||||||||| |||||||||||||||||||||
Sbjct: 58 catgaatcggtcgataaacctctgcatccag 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatc 23
>44845_miR162:micropc
Length = 106
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatcca 96
|||||||||||||||||||||||||||
Sbjct: 80 gaatcgatcgataaacctctgcatcca 106
>46557_miR162:micropc
Length = 85
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatcca 96
||||||||| ||||||||||||||||||||
Sbjct: 56 catgaatcggtcgataaacctctgcatcca 85
>46096_miR162:micropc
Length = 87
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 64 aagcatgaatcgatcgataaacctctgcatccag 97
||||| |||||| |||||||||||||||||||||
Sbjct: 54 aagcaagaatcggtcgataaacctctgcatccag 87
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatc 23
|||||||||||||||||||||||
Sbjct: 1 ctggaggcagcggttcatcgatc 23
>45757_miR162:micropc
Length = 86
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatcca 96
||||||||| ||||||||||||||||||||
Sbjct: 57 catgaatcggtcgataaacctctgcatcca 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatc 23
||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatc 22
>45283_miR162:micropc
Length = 87
Score = 52.0 bits (26), Expect = 7e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 67 catgaatcgatcgataaacctctgcatcca 96
|||||| |||||||||||||||||||||||
Sbjct: 58 catgaaccgatcgataaacctctgcatcca 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 3 ggaggcagcggttcatcgatc 23
|||||||||||||||||||||
Sbjct: 3 ggaggcagcggttcatcgatc 23
>45921_miR162:micropc
Length = 110
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 ctggaggcagcggttcatcgatcaattcctgtg 33
||||||||||||||||||||||| ||||||||
Sbjct: 1 ctggaggcagcggttcatcgatctcttcctgtg 33
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 gatcgataaacctctgcatccag 97
|||||||||||||||||||||||
Sbjct: 88 gatcgataaacctctgcatccag 110
>44920_miR162:micropc
Length = 85
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 64 aagcatgaatcgatcgataaacctctgcatcca 96
||||| |||||| ||||||||||||||||||||
Sbjct: 53 aagcaagaatcggtcgataaacctctgcatcca 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatc 23
||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatc 22
>46628_miR162:micropc
Length = 136
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatccag 97
|||||| |||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatccag 136
>46169_miR162:micropc
Length = 136
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatccag 97
|||||| |||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatccag 136
>45508_miR162:micropc
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 2 tggaggcagcggttcatcgatcaattcctgtg 33
|||||||||||||||||||||| ||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctgtg 32
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 gatcgataaacctctgcatcca 96
||||||||||||||||||||||
Sbjct: 87 gatcgataaacctctgcatcca 108
>45279_miR162:micropc
Length = 114
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatccag 97
|||||||||||||| |||||||||||||
Sbjct: 87 gaatcgatcgataagcctctgcatccag 114
>45084_miR162:micropc
Length = 136
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatccag 97
|||||| |||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatccag 136
>44984_miR162:micropc
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatccag 97
|||||| |||||||||||||||||||||
Sbjct: 58 gaatcggtcgataaacctctgcatccag 85
>44890_miR162:micropc
Length = 141
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatccag 97
|||||| |||||||||||||||||||||
Sbjct: 114 gaatcggtcgataaacctctgcatccag 141
>44807_miR162:micropc
Length = 141
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatccag 97
|||||| |||||||||||||||||||||
Sbjct: 114 gaatcggtcgataaacctctgcatccag 141
>46792_miR162:micropc
Length = 83
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatcca 96
|||||| ||||||||||||||||||||
Sbjct: 57 gaatcggtcgataaacctctgcatcca 83
>46470_miR162:micropc
Length = 135
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatcca 96
|||||| ||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatcca 135
>45868_miR162:micropc
Length = 135
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatcca 96
|||||| ||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatcca 135
>45605_miR162:micropc
Length = 135
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatcca 96
|||||| ||||||||||||||||||||
Sbjct: 109 gaatcggtcgataaacctctgcatcca 135
>45416_miR162:micropc
Length = 139
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatcca 96
|||||| ||||||||||||||||||||
Sbjct: 113 gaatcggtcgataaacctctgcatcca 139
>45338_miR162:micropc
Length = 112
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatcca 96
|||||||||||||| ||||||||||||
Sbjct: 86 gaatcgatcgataagcctctgcatcca 112
>45197_miR162:micropc
Length = 139
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 70 gaatcgatcgataaacctctgcatcca 96
|||||| ||||||||||||||||||||
Sbjct: 113 gaatcggtcgataaacctctgcatcca 139
