miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46494_miR167:micropc
Length = 185
Score = 359 bits (181), Expect = e-100
Identities = 181/181 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggtgatgccaaactgggtggcctgtgtatgtttgtccatata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctggtgatgccaaactgggtggcctgtgtatgtttgtccatata 62
Query: 61 tgagtggataatgtaaaagttctatatatagtcaaatgtctttgtgtgtgtttttggtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgagtggataatgtaaaagttctatatatagtcaaatgtctttgtgtgtgtttttggtga 122
Query: 121 tgtgttggtatctgttcatgggtagagtaaggagaggttaaccaggtcatccttgcagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tgtgttggtatctgttcatgggtagagtaaggagaggttaaccaggtcatccttgcagct 182
Query: 181 t 181
|
Sbjct: 183 t 183
>45486_miR167:micropc
Length = 185
Score = 359 bits (181), Expect = e-100
Identities = 181/181 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggtgatgccaaactgggtggcctgtgtatgtttgtccatata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctggtgatgccaaactgggtggcctgtgtatgtttgtccatata 62
Query: 61 tgagtggataatgtaaaagttctatatatagtcaaatgtctttgtgtgtgtttttggtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgagtggataatgtaaaagttctatatatagtcaaatgtctttgtgtgtgtttttggtga 122
Query: 121 tgtgttggtatctgttcatgggtagagtaaggagaggttaaccaggtcatccttgcagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tgtgttggtatctgttcatgggtagagtaaggagaggttaaccaggtcatccttgcagct 182
Query: 181 t 181
|
Sbjct: 183 t 183
>44854_miR167:micropc
Length = 185
Score = 359 bits (181), Expect = e-100
Identities = 181/181 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggtgatgccaaactgggtggcctgtgtatgtttgtccatata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctggtgatgccaaactgggtggcctgtgtatgtttgtccatata 62
Query: 61 tgagtggataatgtaaaagttctatatatagtcaaatgtctttgtgtgtgtttttggtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgagtggataatgtaaaagttctatatatagtcaaatgtctttgtgtgtgtttttggtga 122
Query: 121 tgtgttggtatctgttcatgggtagagtaaggagaggttaaccaggtcatccttgcagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tgtgttggtatctgttcatgggtagagtaaggagaggttaaccaggtcatccttgcagct 182
Query: 181 t 181
|
Sbjct: 183 t 183
>46119_miR167:micropc
Length = 191
Score = 50.1 bits (25), Expect = 6e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggtgatgccaaactg 33
||||||||||||||||||| | |||||||||||
Sbjct: 1 aagctgccagcatgatctgataatgccaaactg 33
>46042_miR167:micropc
Length = 195
Score = 50.1 bits (25), Expect = 6e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggtgatgccaaactg 33
||||||||||||||||||| | |||||||||||
Sbjct: 3 aagctgccagcatgatctgataatgccaaactg 35
>44864_miR167:micropc
Length = 195
Score = 50.1 bits (25), Expect = 6e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggtgatgccaaactg 33
||||||||||||||||||| | |||||||||||
Sbjct: 3 aagctgccagcatgatctgataatgccaaactg 35
>46777_miR167:micropc
Length = 71
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggt 21
|||||||||||||||||||||
Sbjct: 1 aagctgccagcatgatctggt 21
>46609_miR167:micropc
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggtgatg 25
||||||||||||||||||| |||||
Sbjct: 3 aagctgccagcatgatctgatgatg 27
>46017_miR167:micropc
Length = 75
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggt 21
|||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctggt 23
>45878_miR167:micropc
Length = 200
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggt 21
|||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctggt 23
>45876_miR167:micropc
Length = 75
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggt 21
|||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctggt 23
>45521_miR167:micropc
Length = 196
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggt 21
|||||||||||||||||||||
Sbjct: 1 aagctgccagcatgatctggt 21
>45474_miR167:micropc
Length = 196
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggt 21
|||||||||||||||||||||
Sbjct: 1 aagctgccagcatgatctggt 21
>45355_miR167:micropc
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggtgatg 25
||||||||||||||||||| |||||
Sbjct: 3 aagctgccagcatgatctgatgatg 27
>45264_miR167:micropc
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggtgatg 25
||||||||||||||||||| |||||
Sbjct: 3 aagctgccagcatgatctgatgatg 27
>45112_miR167:micropc
Length = 75
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggt 21
|||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctggt 23
>45003_miR167:micropc
Length = 200
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggt 21
|||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctggt 23
>44905_miR167:micropc
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggtgatg 25
||||||||||||||||||| |||||
Sbjct: 3 aagctgccagcatgatctgatgatg 27
>44899_miR167:micropc
Length = 200
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 aagctgccagcatgatctggt 21
|||||||||||||||||||||
Sbjct: 3 aagctgccagcatgatctggt 23
