miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46181_miR160:micropc
Length = 82
Score = 163 bits (82), Expect = 2e-41
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcatgtagcccaatccatggtgtgtttggatgctgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgcatgccactcatgtagcccaatccatggtgtgtttggatgctgtgg 60
Query: 61 gtggcgtgcaaggagccaagca 82
||||||||||||||||||||||
Sbjct: 61 gtggcgtgcaaggagccaagca 82
>45679_miR160:micropc
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactcatgtagcccaatccatggtgtgtttggatgctgtggg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcctggctccctgcatgccactcatgtagcccaatccatggtgtgtttggatgctgtggg 60
Query: 62 tggcgtgcaaggagccaagc 81
||||||||||||||||||||
Sbjct: 61 tggcgtgcaaggagccaagc 80
>44878_miR160:micropc
Length = 80
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactcatgtagcccaatccatggtgtgtttggatgctgtggg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcctggctccctgcatgccactcatgtagcccaatccatggtgtgtttggatgctgtggg 60
Query: 62 tggcgtgcaaggagccaagc 81
||||||||||||||||||||
Sbjct: 61 tggcgtgcaaggagccaagc 80
>45965_miR160:micropc
Length = 83
Score = 77.8 bits (39), Expect = 1e-15
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcatgtagcccaatccatg-gtgtgtttggatgctgtg 59
|||||||||||||| ||||||| |||||||||||| ||| | |||| ||| |||||||
Sbjct: 1 tgcctggctccctgtatgccacacatgtagcccaacccaagaatgtggttgcctgctgtg 60
Query: 60 ggtggcgtgcaaggagccaagca 82
|||||||||||||| ||||||||
Sbjct: 61 ggtggcgtgcaaggtgccaagca 83
>45344_miR160:micropc
Length = 83
Score = 77.8 bits (39), Expect = 1e-15
Identities = 73/83 (87%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcatgtagcccaatccatg-gtgtgtttggatgctgtg 59
|||||||||||||| ||||||| |||||||||||| ||| | |||| ||| |||||||
Sbjct: 1 tgcctggctccctgtatgccacacatgtagcccaacccaagaatgtggttgcctgctgtg 60
Query: 60 ggtggcgtgcaaggagccaagca 82
|||||||||||||| ||||||||
Sbjct: 61 ggtggcgtgcaaggtgccaagca 83
>46756_miR160:micropc
Length = 81
Score = 73.8 bits (37), Expect = 2e-14
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactcatgtagcccaatccatg-gtgtgtttggatgctgtgg 60
||||||||||||| ||||||| |||||||||||| ||| | |||| ||| ||||||||
Sbjct: 1 gcctggctccctgtatgccacacatgtagcccaacccaagaatgtggttgcctgctgtgg 60
Query: 61 gtggcgtgcaaggagccaagc 81
||||||||||||| |||||||
Sbjct: 61 gtggcgtgcaaggtgccaagc 81
>46645_miR160:micropc
Length = 81
Score = 73.8 bits (37), Expect = 2e-14
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactcatgtagcccaatccatg-gtgtgtttggatgctgtgg 60
||||||||||||| ||||||| |||||||||||| ||| | |||| ||| ||||||||
Sbjct: 1 gcctggctccctgtatgccacacatgtagcccaacccaagaatgtggttgcctgctgtgg 60
Query: 61 gtggcgtgcaaggagccaagc 81
||||||||||||| |||||||
Sbjct: 61 gtggcgtgcaaggtgccaagc 81
>46355_miR160:micropc
Length = 87
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcat 26
|||||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcat 26
>46219_miR160:micropc
Length = 87
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcat 26
|||||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcat 26
>45945_miR160:micropc
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccac 22
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgcatgccac 22
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 57 gtgggtggcgtgcaaggagccaagca 82
||||||||||||| ||||||||||||
Sbjct: 63 gtgggtggcgtgcgaggagccaagca 88
>45476_miR160:micropc
Length = 87
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcat 26
|||||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcat 26
>45239_miR160:micropc
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcat 26
|||||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcat 26
>45081_miR160:micropc
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccac 22
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgcatgccac 22
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 57 gtgggtggcgtgcaaggagccaagca 82
||||||||||||| ||||||||||||
Sbjct: 63 gtgggtggcgtgcgaggagccaagca 88
>44884_miR160:micropc
Length = 87
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcat 26
|||||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcat 26
>44844_miR160:micropc
Length = 88
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactcat 26
|||||||||||||| |||||||||||
Sbjct: 1 tgcctggctccctgtatgccactcat 26
>46664_miR160:micropc
Length = 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactcat 26
||||||||||||| |||||||||||
Sbjct: 1 gcctggctccctgtatgccactcat 25
>46561_miR160:micropc
Length = 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactcat 26
||||||||||||| |||||||||||
Sbjct: 1 gcctggctccctgtatgccactcat 25
>46242_miR160:micropc
Length = 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactcat 26
||||||||||||| |||||||||||
Sbjct: 1 gcctggctccctgtatgccactcat 25
>46227_miR160:micropc
Length = 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactcat 26
||||||||||||| |||||||||||
Sbjct: 1 gcctggctccctgtatgccactcat 25
>45931_miR160:micropc
Length = 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactcat 26
||||||||||||| |||||||||||
Sbjct: 1 gcctggctccctgtatgccactcat 25
>45893_miR160:micropc
Length = 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactcat 26
||||||||||||| |||||||||||
Sbjct: 1 gcctggctccctgtatgccactcat 25
>45499_miR160:micropc
Length = 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactcat 26
||||||||||||| |||||||||||
Sbjct: 1 gcctggctccctgtatgccactcat 25
>45353_miR160:micropc
Length = 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactcat 26
||||||||||||| |||||||||||
Sbjct: 1 gcctggctccctgtatgccactcat 25
>45246_miR160:micropc
Length = 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactcat 26
||||||||||||| |||||||||||
Sbjct: 1 gcctggctccctgtatgccactcat 25
>45077_miR160:micropc
Length = 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactcat 26
||||||||||||| |||||||||||
Sbjct: 1 gcctggctccctgtatgccactcat 25
>45038_miR160:micropc
Length = 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccac 22
|||||||||||||||||||||
Sbjct: 1 gcctggctccctgcatgccac 21
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 57 gtgggtggcgtgcaaggagccaagc 81
||||||||||||| |||||||||||
Sbjct: 62 gtgggtggcgtgcgaggagccaagc 86
>44877_miR160:micropc
Length = 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccac 22
|||||||||||||||||||||
Sbjct: 1 gcctggctccctgcatgccac 21
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 57 gtgggtggcgtgcaaggagccaagc 81
||||||||||||| |||||||||||
Sbjct: 62 gtgggtggcgtgcgaggagccaagc 86
>46489_miR160:micropc
Length = 130
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactc 24
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>46232_miR160:micropc
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 gggtggcgtgcaaggagccaagca 82
||||||||||| ||||||||||||
Sbjct: 58 gggtggcgtgcgaggagccaagca 81
>46171_miR160:micropc
Length = 124
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactc 24
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>46025_miR160:micropc
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactc 24
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>45870_miR160:micropc
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactc 24
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>45803_miR160:micropc
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 gggtggcgtgcaaggagccaagca 82
||||||||||| ||||||||||||
Sbjct: 61 gggtggcgtgcgaggagccaagca 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccact 23
|||||||||||||| ||||||||
Sbjct: 1 tgcctggctccctgtatgccact 23
>45601_miR160:micropc
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactc 24
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>45576_miR160:micropc
Length = 124
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactc 24
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>45467_miR160:micropc
Length = 130
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactc 24
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>45418_miR160:micropc
Length = 130
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactc 24
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>45369_miR160:micropc
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 gggtggcgtgcaaggagccaagca 82
||||||||||| ||||||||||||
Sbjct: 61 gggtggcgtgcgaggagccaagca 84
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccact 23
|||||||||||||| ||||||||
Sbjct: 1 tgcctggctccctgtatgccact 23
>45236_miR160:micropc
Length = 130
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactc 24
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>45196_miR160:micropc
Length = 81
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 59 gggtggcgtgcaaggagccaagca 82
||||||||||| ||||||||||||
Sbjct: 58 gggtggcgtgcgaggagccaagca 81
>45164_miR160:micropc
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgcatgccactc 24
|||||||||||||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccactc 24
>46734_miR160:micropc
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactc 24
||||||||||||| |||||||||
Sbjct: 1 gcctggctccctgtatgccactc 23
>46543_miR160:micropc
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactc 24
||||||||||||| |||||||||
Sbjct: 1 gcctggctccctgtatgccactc 23
>46291_miR160:micropc
Length = 122
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactc 24
||||||||||||| |||||||||
Sbjct: 1 gcctggctccctgtatgccactc 23
>46259_miR160:micropc
Length = 82
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 gggtggcgtgcaaggagccaagc 81
||||||||||| |||||||||||
Sbjct: 60 gggtggcgtgcgaggagccaagc 82
>46088_miR160:micropc
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactc 24
||||||||||||| |||||||||
Sbjct: 1 gcctggctccctgtatgccactc 23
>45891_miR160:micropc
Length = 88
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactc 24
||||||||||||| |||||||||
Sbjct: 1 gcctggctccctgtatgccactc 23
>45325_miR160:micropc
Length = 79
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 gggtggcgtgcaaggagccaagc 81
||||||||||| |||||||||||
Sbjct: 57 gggtggcgtgcgaggagccaagc 79
>44958_miR160:micropc
Length = 79
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 gggtggcgtgcaaggagccaagc 81
||||||||||| |||||||||||
Sbjct: 57 gggtggcgtgcgaggagccaagc 79
>44900_miR160:micropc
Length = 82
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 59 gggtggcgtgcaaggagccaagc 81
||||||||||| |||||||||||
Sbjct: 60 gggtggcgtgcgaggagccaagc 82
>44874_miR160:micropc
Length = 122
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 gcctggctccctgcatgccactc 24
||||||||||||| |||||||||
Sbjct: 1 gcctggctccctgtatgccactc 23
