miRNEST 2.0, an integrative microRNA resource :: BLAST
>46758_miR808:micropc
Length = 98
Score = 194 bits (98), Expect = 8e-51
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 2 ttctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatctag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatctag 60
Query: 62 attcattaacattaatatgaatatgggaaatgttagaa 99
||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attcattaacattaatatgaatatgggaaatgttagaa 98
Score = 60.0 bits (30), Expect = 3e-10
Identities = 72/86 (83%)
Strand = Plus / Minus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
|||||| |||||||||||| ||| ||| ||||||||| |||||| ||||||||| |
Sbjct: 92 catttcccatattcatattaatgttaatgaatctagatggatatatatgtctagattcgt 33
Query: 68 taacattaatatgaatatgggaaatg 93
|| ||| |||||||||||| ||||||
Sbjct: 32 tagcatcaatatgaatatgagaaatg 7
>45708_miR809:micropc
Length = 100
Score = 119 bits (60), Expect = 4e-28
Identities = 84/92 (91%)
Strand = Plus / Minus
Query: 9 atttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcatt 68
|||||||| ||| ||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 92 atttctcacatttatattgatgctaatgaatctagacatatatatctatctagattcatt 33
Query: 69 aacattaatatgaatatgggaaatgttagaat 100
|| || |||||||||||| ||||||||||||
Sbjct: 32 aatatcaatatgaatatgaaaaatgttagaat 1
Score = 65.9 bits (33), Expect = 5e-12
Identities = 78/93 (83%)
Strand = Plus / Plus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
||||| |||||||||||||||| ||| ||||||||| | |||||| |||||||||||
Sbjct: 8 catttttcatattcatattgatattaatgaatctagatagatatatatgtctagattcat 67
Query: 68 taacattaatatgaatatgggaaatgttagaat 100
|| ||| ||||| ||| || ||||| |||||||
Sbjct: 68 tagcatcaatataaatgtgagaaattttagaat 100
>46801_miR809:micropc
Length = 110
Score = 109 bits (55), Expect = 4e-25
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 22 atattgatgctaacgaatctagacatatatatccatctagattcattaacattaatatga 81
||||||||| ||| ||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 79 atattgatgttaatgaatctaaacatatatatctatctagattcattaacattaatatga 20
Query: 82 atatgggaaatgttagaat 100
|| ||||||||| ||||||
Sbjct: 19 atgtgggaaatgatagaat 1
Score = 48.1 bits (24), Expect = 1e-06
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
|||||| || ||||||||| ||| ||| ||||||||| | |||||| | |||||||||
Sbjct: 8 catttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcat 67
Query: 68 taacattaatat 79
|||||| |||||
Sbjct: 68 taacatcaatat 79
>46637_miR446:micropc
Length = 80
Score = 97.6 bits (49), Expect = 1e-21
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 19 ttcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaata 78
|||||||| ||| ||| ||||||||||||||||||| | |||||||||||||||| ||||
Sbjct: 8 ttcatattaatgttaatgaatctagacatatatatctagctagattcattaacatcaata 67
Query: 79 tgaatatgggaaa 91
|||||||||||||
Sbjct: 68 tgaatatgggaaa 80
Score = 73.8 bits (37), Expect = 2e-14
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 10 tttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcatta 69
|||| |||||||||||||||| ||| |||||||| | |||||| |||||||||||||
Sbjct: 80 tttcccatattcatattgatgttaatgaatctagctagatatatatgtctagattcatta 21
Query: 70 acattaatatgaa 82
|||||||||||||
Sbjct: 20 acattaatatgaa 8
>46080_miR809:micropc
Length = 99
Score = 87.7 bits (44), Expect = 1e-18
Identities = 81/92 (88%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||||||| ||||||||||||| ||| |||| |||||||||||||| |||||
Sbjct: 99 attctagcatttctcacattcatattgatggtaatgaatatagacatatatatctatcta 40
Query: 61 gattcattaacattaatatgaatatgggaaat 92
|| |||| | ||| ||||||||| ||||||||
Sbjct: 39 ga-tcatcagcatcaatatgaatgtgggaaat 9
Score = 48.1 bits (24), Expect = 1e-06
Identities = 76/92 (82%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcatt 68
||||| || ||||||||||||||| | | ||||||| | |||||| |||| |||||||
Sbjct: 9 atttcccacattcatattgatgctgatg-atctagatagatatatatgtctatattcatt 67
Query: 69 aacattaatatgaatatgggaaatgttagaat 100
| ||| ||||||||| || |||||| ||||||
Sbjct: 68 accatcaatatgaatgtgagaaatgctagaat 99
>45707_miR809:micropc
Length = 99
Score = 87.7 bits (44), Expect = 1e-18
Identities = 81/92 (88%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||||||| ||||||||||||| ||| |||| |||||||||||||| |||||
Sbjct: 99 attctagcatttctcacattcatattgatggtaatgaatatagacatatatatctatcta 40
Query: 61 gattcattaacattaatatgaatatgggaaat 92
|| |||| | ||| ||||||||| ||||||||
Sbjct: 39 ga-tcatcagcatcaatatgaatgtgggaaat 9
Score = 48.1 bits (24), Expect = 1e-06
Identities = 76/92 (82%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcatt 68
||||| || ||||||||||||||| | | ||||||| | |||||| |||| |||||||
Sbjct: 9 atttcccacattcatattgatgctgatg-atctagatagatatatatgtctatattcatt 67
Query: 69 aacattaatatgaatatgggaaatgttagaat 100
| ||| ||||||||| || |||||| ||||||
Sbjct: 68 accatcaatatgaatgtgagaaatgctagaat 99
>46318_miR446:micropc
Length = 86
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 16 atattcatattgatgctaacgaatctagacatatatatccatctagattcattaacatta 75
||||||||||||| | ||| |||||||||||||||||| || ||||||||||||||| |
Sbjct: 78 atattcatattgacgttaataaatctagacatatatatctatatagattcattaacatca 19
Query: 76 atatgaatatgggaaatg 93
||| |||||||||||||
Sbjct: 18 ttataaatatgggaaatg 1
Score = 52.0 bits (26), Expect = 8e-08
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
|||||| |||||| ||| ||||| ||| ||||||| | | |||||| |||||||| ||
Sbjct: 1 catttcccatatttataatgatgttaatgaatctatatagatatatatgtctagatttat 60
Query: 68 taacattaatatgaatatgggaaatg 93
|||| | ||||||||||| |||||||
Sbjct: 61 taacgtcaatatgaatataggaaatg 86
>46833_miR446:micropc
Length = 81
Score = 79.8 bits (40), Expect = 3e-16
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 22 atattgatgctaacgaatctagacatatatatccatctagattcattaacattaatatga 81
||||||||| ||| ||||||||||||| ||||| ||||| |||||||||||| |||||||
Sbjct: 10 atattgatgttaatgaatctagacatacatatctatctaaattcattaacatcaatatga 69
Query: 82 atatgggaaatg 93
|| ||| |||||
Sbjct: 70 atgtggaaaatg 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
||||||||||||| ||| |||| |||| | |||| | ||||||||||||||||| |||
Sbjct: 71 attcatattgatgttaatgaatttagatagatatgtatgtctagattcattaacatcaat 12
Query: 78 at 79
||
Sbjct: 11 at 10
>45522_miR809:micropc
Length = 100
Score = 79.8 bits (40), Expect = 3e-16
Identities = 85/100 (85%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatcta 60
||||| |||||| || |||| || ||||| ||| |||||||||||||| |||| |||||
Sbjct: 1 attctagcattttccacattcgtaatgatgttaatgaatctagacatatgtatctatcta 60
Query: 61 gattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||| || | |||| ||||||||| ||||||
Sbjct: 61 gattcattaacatcaacacgaatgtgggaaatgatagaat 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 75/93 (80%)
Strand = Plus / Minus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
|||||| || |||| | |||||| ||| ||||||||| | ||| || |||||||||||
Sbjct: 93 catttcccacattcgtgttgatgttaatgaatctagatagatacatatgtctagattcat 34
Query: 68 taacattaatatgaatatgggaaatgttagaat 100
|||||| | || |||| ||| ||||| ||||||
Sbjct: 33 taacatcattacgaatgtggaaaatgctagaat 1
>45913_miR809:micropc
Length = 100
Score = 67.9 bits (34), Expect = 1e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 59 tagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 59 tagattcattaacatcaatatgaatgtgggaaatgttagaat 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
|||||| || ||||||||||||| ||| ||||||| | ||||||||| ||||||||| ||
Sbjct: 93 catttcccacattcatattgatgttaatgaatcta-aaatatatatctatctagatttat 35
Query: 68 taacat 73
||||||
Sbjct: 34 taacat 29
>46775_miR808:micropc
Length = 98
Score = 65.9 bits (33), Expect = 5e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 59 tagattcattaacattaatatgaatatgggaaatgttagaa 99
||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 58 tagattcattaacatcaatatgaatgtgggaaatgttagaa 98
Score = 60.0 bits (30), Expect = 3e-10
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
|||||| || ||||||||||||| ||| ||||||| | ||||||||| ||||||||| ||
Sbjct: 92 catttcccacattcatattgatgttaatgaatcta-aaatatatatctatctagatttat 34
Query: 68 taacat 73
||||||
Sbjct: 33 taacat 28
>46060_miR809:micropc
Length = 87
Score = 63.9 bits (32), Expect = 2e-11
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
||||||||||||||||| ||||||||||||| ||||| ||||||
Sbjct: 44 tctagattcattaacatcaatatgaatatggaaaatgctagaat 1
Score = 50.1 bits (25), Expect = 3e-07
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagac 45
||||| |||||| |||||||||||||||| ||| ||||||||||
Sbjct: 1 attctagcattttccatattcatattgatgttaatgaatctagac 45
>45995_miR446:micropc
Length = 86
Score = 60.0 bits (30), Expect = 3e-10
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
|||||| || ||||||||||||| ||| ||||||| | ||||||||| ||||||||| ||
Sbjct: 86 catttcccacattcatattgatgttaatgaatcta-aaatatatatctatctagatttat 28
Query: 68 taacat 73
||||||
Sbjct: 27 taacat 22
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 59 tagattcattaacattaatatgaatatgggaaatg 93
||||||||||||||| ||||||||| |||||||||
Sbjct: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
>45717_miR446:micropc
Length = 86
Score = 60.0 bits (30), Expect = 3e-10
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
|||||| || ||||||||||||| ||| ||||||| | ||||||||| ||||||||| ||
Sbjct: 86 catttcccacattcatattgatgttaatgaatcta-aaatatatatctatctagatttat 28
Query: 68 taacat 73
||||||
Sbjct: 27 taacat 22
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 59 tagattcattaacattaatatgaatatgggaaatg 93
||||||||||||||| ||||||||| |||||||||
Sbjct: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
>45176_miR446:micropc
Length = 86
Score = 60.0 bits (30), Expect = 3e-10
Identities = 58/66 (87%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
|||||| || ||||||||||||| ||| ||||||| | ||||||||| ||||||||| ||
Sbjct: 86 catttcccacattcatattgatgttaatgaatcta-aaatatatatctatctagatttat 28
Query: 68 taacat 73
||||||
Sbjct: 27 taacat 22
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 59 tagattcattaacattaatatgaatatgggaaatg 93
||||||||||||||| ||||||||| |||||||||
Sbjct: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
>45731_miR446:micropc
Length = 86
Score = 56.0 bits (28), Expect = 5e-09
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
|||||||| ||| ||| ||||||| |||||||| | ||||||||||||||||| |||
Sbjct: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
Query: 78 atgaatatgggaaatg 93
|||||| |||| ||||
Sbjct: 71 atgaatgtgggcaatg 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
||||||||||||| ||| ||||||||||| | |||| | |||||||||||| || ||
Sbjct: 76 attcatattgatgttaatgaatctagacacacatatatgtttagattcattaaaatctat 17
Query: 78 atgaat 83
||||||
Sbjct: 16 atgaat 11
>45998_miR446:micropc
Length = 53
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 2 ttctggcatttctcatattcatattgatg 30
|||| ||||||||||||||||||||||||
Sbjct: 29 ttctagcatttctcatattcatattgatg 1
>46670_miR809:micropc
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaa 99
|||| |||||||||||| |||||||| |||| ||||||||||
Sbjct: 55 tctacattcattaacatatatatgaatgtgggtaatgttagaa 97
>46464_miR1132:micropc
Length = 149
Score = 46.1 bits (23), Expect = 5e-06
Identities = 71/87 (81%)
Strand = Plus / Plus
Query: 2 ttctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatctag 61
|||| ||||| | ||||||||||| ||| ||| |||||||| ||||||||| | |||
Sbjct: 26 ttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtttag 85
Query: 62 attcattaacattaatatgaatatggg 88
|||||||||| | |||| ||||||||
Sbjct: 86 attcattaacttctatataaatatggg 112
>46336_miR809:micropc
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatat 51
||||| |||||| ||| ||||||||| || ||| ||||||||||||||||
Sbjct: 98 attctagcatttttcacattcatatttatattaatgaatctagacatatat 48
Score = 40.1 bits (20), Expect = 3e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||||| || ||||||||| || ||||| ||||||
Sbjct: 55 tctagattcattaatataaatatgaatgtgaaaaatgctagaat 98
>45839_miR809:micropc
Length = 98
Score = 46.1 bits (23), Expect = 5e-06
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 1 attctggcatttctcatattcatattgatgctaacgaatctagacatatat 51
||||| |||||| ||| ||||||||| || ||| ||||||||||||||||
Sbjct: 98 attctagcatttttcacattcatatttatattaatgaatctagacatatat 48
Score = 40.1 bits (20), Expect = 3e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaat 100
|||||||||||||| || ||||||||| || ||||| ||||||
Sbjct: 55 tctagattcattaatataaatatgaatgtgaaaaatgctagaat 98
>45514_miR1132:micropc
Length = 149
Score = 46.1 bits (23), Expect = 5e-06
Identities = 71/87 (81%)
Strand = Plus / Plus
Query: 2 ttctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatctag 61
|||| ||||| | ||||||||||| ||| ||| |||||||| ||||||||| | |||
Sbjct: 26 ttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtttag 85
Query: 62 attcattaacattaatatgaatatggg 88
|||||||||| | |||| ||||||||
Sbjct: 86 attcattaacttctatataaatatggg 112
>45099_miR1132:micropc
Length = 149
Score = 46.1 bits (23), Expect = 5e-06
Identities = 71/87 (81%)
Strand = Plus / Plus
Query: 2 ttctggcatttctcatattcatattgatgctaacgaatctagacatatatatccatctag 61
|||| ||||| | ||||||||||| ||| ||| |||||||| ||||||||| | |||
Sbjct: 26 ttctagcattgcacatattcatatagatattaatgaatctaggcatatatatgtgtttag 85
Query: 62 attcattaacattaatatgaatatggg 88
|||||||||| | |||| ||||||||
Sbjct: 86 attcattaacttctatataaatatggg 112
>44980_miR808:micropc
Length = 97
Score = 46.1 bits (23), Expect = 5e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 57 tctagattcattaacattaatatgaatatgggaaatgttagaa 99
|||| |||||||||||| |||||||| |||| ||||||||||
Sbjct: 55 tctacattcattaacatatatatgaatgtgggtaatgttagaa 97
>46468_miR446:micropc
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 63 ttcattaacattaatatgaatatgggaaat 92
||||||||||| ||||||||| ||||||||
Sbjct: 48 ttcattaacatcaatatgaatgtgggaaat 77
>45260_miR819:micropc
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 61/73 (83%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 15 catattcatattgatgctaacgaatctagacatatatatccatctagattcattaacatt 74
|||||| |||| |||| ||| |||| |||||| |||||| | |||||||||||||||
Sbjct: 93 catatttatatagatgttaatgaatatagacacatatatg--tttagattcattaacata 36
Query: 75 aatatgaatatgg 87
||||||||||||
Sbjct: 35 tatatgaatatgg 23
>45215_miR1120:micropc
Length = 142
Score = 44.1 bits (22), Expect = 2e-05
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 8 catttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcat 67
|||| ||||||| ||||| |||| ||| |||| || ||| ||| || ||||||||||||
Sbjct: 114 cattgctcatatacatatagatgttaatgaatttaaacacataaatatatctagattcat 55
Query: 68 taacat 73
||||||
Sbjct: 54 taacat 49
>45075_miR819:micropc
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 61/73 (83%), Gaps = 2/73 (2%)
Strand = Plus / Minus
Query: 15 catattcatattgatgctaacgaatctagacatatatatccatctagattcattaacatt 74
|||||| |||| |||| ||| |||| |||||| |||||| | |||||||||||||||
Sbjct: 93 catatttatatagatgttaatgaatatagacacatatatg--tttagattcattaacata 36
Query: 75 aatatgaatatgg 87
||||||||||||
Sbjct: 35 tatatgaatatgg 23
