miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45509_miR166:micropc
Length = 199
Score = 190 bits (96), Expect = 3e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 102 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 162
Query: 162 tcttgatctggtgtcgtcggaccaggcttcattccc 197
||||||||||||||||||||||||||||||||||||
Sbjct: 163 tcttgatctggtgtcgtcggaccaggcttcattccc 198
Score = 143 bits (72), Expect = 6e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 1 gagggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gagggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggat 61
Query: 61 ctcttttctctc 72
||||||||||||
Sbjct: 62 ctcttttctctc 73
>45116_miR166:micropc
Length = 197
Score = 190 bits (96), Expect = 3e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 102 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 161
Query: 162 tcttgatctggtgtcgtcggaccaggcttcattccc 197
||||||||||||||||||||||||||||||||||||
Sbjct: 162 tcttgatctggtgtcgtcggaccaggcttcattccc 197
Score = 143 bits (72), Expect = 6e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 1 gagggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggat 60
Query: 61 ctcttttctctc 72
||||||||||||
Sbjct: 61 ctcttttctctc 72
>45879_miR166:micropc
Length = 194
Score = 188 bits (95), Expect = 1e-48
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 102 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 159
Query: 162 tcttgatctggtgtcgtcggaccaggcttcattcc 196
|||||||||||||||||||||||||||||||||||
Sbjct: 160 tcttgatctggtgtcgtcggaccaggcttcattcc 194
Score = 139 bits (70), Expect = 9e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 3 gggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggatct 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggatct 60
Query: 63 cttttctctc 72
||||||||||
Sbjct: 61 cttttctctc 70
>45567_miR166:micropc
Length = 194
Score = 188 bits (95), Expect = 1e-48
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 102 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 159
Query: 162 tcttgatctggtgtcgtcggaccaggcttcattcc 196
|||||||||||||||||||||||||||||||||||
Sbjct: 160 tcttgatctggtgtcgtcggaccaggcttcattcc 194
Score = 139 bits (70), Expect = 9e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 3 gggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggatct 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggatct 60
Query: 63 cttttctctc 72
||||||||||
Sbjct: 61 cttttctctc 70
>46741_miR166:micropc
Length = 151
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 172 gtgtcgtcggaccaggcttcattccc 197
||||||||||||||||||||||||||
Sbjct: 126 gtgtcgtcggaccaggcttcattccc 151
>46481_miR166:micropc
Length = 88
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 172 gtgtcgtcggaccaggcttcattccc 197
||||||||||||||||||||||||||
Sbjct: 63 gtgtcgtcggaccaggcttcattccc 88
>46431_miR166:micropc
Length = 153
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 172 gtgtcgtcggaccaggcttcattccc 197
||||||||||||||||||||||||||
Sbjct: 127 gtgtcgtcggaccaggcttcattccc 152
>46390_miR166:micropc
Length = 151
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 172 gtgtcgtcggaccaggcttcattccc 197
||||||||||||||||||||||||||
Sbjct: 126 gtgtcgtcggaccaggcttcattccc 151
>46337_miR166:micropc
Length = 145
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 172 gtgtcgtcggaccaggcttcattccc 197
||||||||||||||||||||||||||
Sbjct: 120 gtgtcgtcggaccaggcttcattccc 145
>45905_miR166:micropc
Length = 100
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 172 gtgtcgtcggaccaggcttcattccc 197
||||||||||||||||||||||||||
Sbjct: 75 gtgtcgtcggaccaggcttcattccc 100
>45748_miR166:micropc
Length = 100
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 172 gtgtcgtcggaccaggcttcattccc 197
||||||||||||||||||||||||||
Sbjct: 75 gtgtcgtcggaccaggcttcattccc 100
>45518_miR166:micropc
Length = 131
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 172 gtgtcgtcggaccaggcttcattccc 197
||||||||||||||||||||||||||
Sbjct: 106 gtgtcgtcggaccaggcttcattccc 131
>45045_miR166:micropc
Length = 149
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 172 gtgtcgtcggaccaggcttcattcc 196
|||||||||||||||||||||||||
Sbjct: 125 gtgtcgtcggaccaggcttcattcc 149
>44943_miR166:micropc
Length = 149
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 172 gtgtcgtcggaccaggcttcattcc 196
|||||||||||||||||||||||||
Sbjct: 125 gtgtcgtcggaccaggcttcattcc 149
>46784_miR166:micropc
Length = 138
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 174 gtcgtcggaccaggcttcattccc 197
||||||||||||||||||||||||
Sbjct: 115 gtcgtcggaccaggcttcattccc 138
>46335_miR166:micropc
Length = 99
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 174 gtcgtcggaccaggcttcattccc 197
||||||||||||||||||||||||
Sbjct: 76 gtcgtcggaccaggcttcattccc 99
>46273_miR166:micropc
Length = 138
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 174 gtcgtcggaccaggcttcattccc 197
||||||||||||||||||||||||
Sbjct: 115 gtcgtcggaccaggcttcattccc 138
>45764_miR166:micropc
Length = 99
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 174 gtcgtcggaccaggcttcattccc 197
||||||||||||||||||||||||
Sbjct: 76 gtcgtcggaccaggcttcattccc 99
>45017_miR166:micropc
Length = 178
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 174 gtcgtcggaccaggcttcattccc 197
||||||||||||||||||||||||
Sbjct: 155 gtcgtcggaccaggcttcattccc 178
>44979_miR166:micropc
Length = 99
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 174 gtcgtcggaccaggcttcattccc 197
||||||||||||||||||||||||
Sbjct: 76 gtcgtcggaccaggcttcattccc 99
>46070_miR166:micropc
Length = 142
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 167 atctggtgtcgtcggaccaggcttcattccc 197
|||| |||| |||||||||||||||||||||
Sbjct: 111 atcttgtgttgtcggaccaggcttcattccc 141
>45882_miR166:micropc
Length = 140
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 167 atctggtgtcgtcggaccaggcttcattccc 197
|||| |||| |||||||||||||||||||||
Sbjct: 110 atcttgtgttgtcggaccaggcttcattccc 140
>44803_miR166:micropc
Length = 140
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 167 atctggtgtcgtcggaccaggcttcattccc 197
|||| |||| |||||||||||||||||||||
Sbjct: 110 atcttgtgttgtcggaccaggcttcattccc 140
>46788_miR166:micropc
Length = 164
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 176 cgtcggaccaggcttcattccc 197
||||||||||||||||||||||
Sbjct: 142 cgtcggaccaggcttcattccc 163
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 atgttgtctggctccaggccacta 29
|||||||||||||| |||||||||
Sbjct: 6 atgttgtctggctcgaggccacta 29
>46248_miR166:micropc
Length = 76
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 176 cgtcggaccaggcttcattccc 197
||||||||||||||||||||||
Sbjct: 55 cgtcggaccaggcttcattccc 76
>46204_miR166:micropc
Length = 76
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 176 cgtcggaccaggcttcattccc 197
||||||||||||||||||||||
Sbjct: 55 cgtcggaccaggcttcattccc 76
>45434_miR166:micropc
Length = 138
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 167 atctggtgtcgtcggaccaggcttcattcc 196
|||| |||| ||||||||||||||||||||
Sbjct: 109 atcttgtgttgtcggaccaggcttcattcc 138
>44922_miR166:micropc
Length = 78
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 176 cgtcggaccaggcttcattccc 197
||||||||||||||||||||||
Sbjct: 56 cgtcggaccaggcttcattccc 77
>44893_miR166:micropc
Length = 162
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 176 cgtcggaccaggcttcattccc 197
||||||||||||||||||||||
Sbjct: 141 cgtcggaccaggcttcattccc 162
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 atgttgtctggctccaggccacta 29
|||||||||||||| |||||||||
Sbjct: 5 atgttgtctggctcgaggccacta 28
>46517_miR166:micropc
Length = 75
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 177 gtcggaccaggcttcattccc 197
|||||||||||||||||||||
Sbjct: 54 gtcggaccaggcttcattccc 74
>46444_miR166:micropc
Length = 73
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 177 gtcggaccaggcttcattccc 197
|||||||||||||||||||||
Sbjct: 53 gtcggaccaggcttcattccc 73
>46438_miR166:micropc
Length = 74
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 176 cgtcggaccaggcttcattcc 196
|||||||||||||||||||||
Sbjct: 54 cgtcggaccaggcttcattcc 74
>45781_miR166:micropc
Length = 117
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 177 gtcggaccaggcttcattccc 197
|||||||||||||||||||||
Sbjct: 97 gtcggaccaggcttcattccc 117
>45008_miR166:micropc
Length = 73
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 177 gtcggaccaggcttcattccc 197
|||||||||||||||||||||
Sbjct: 53 gtcggaccaggcttcattccc 73
>44945_miR166:micropc
Length = 117
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 177 gtcggaccaggcttcattccc 197
|||||||||||||||||||||
Sbjct: 97 gtcggaccaggcttcattccc 117
>44795_miR166:micropc
Length = 160
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 176 cgtcggaccaggcttcattcc 196
|||||||||||||||||||||
Sbjct: 140 cgtcggaccaggcttcattcc 160
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 atgttgtctggctccaggccacta 29
|||||||||||||| |||||||||
Sbjct: 4 atgttgtctggctcgaggccacta 27
>46839_miR166:micropc
Length = 85
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 66 tcggaccaggcttcattccc 85
>46809_miR166:micropc
Length = 88
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 67 tcggaccaggcttcattccc 86
>46782_miR166:micropc
Length = 108
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 89 tcggaccaggcttcattccc 108
>46766_miR166:micropc
Length = 108
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 89 tcggaccaggcttcattccc 108
>46747_miR166:micropc
Length = 114
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 94 tcggaccaggcttcattccc 113
>46733_miR166:micropc
Length = 111
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 92 tcggaccaggcttcattccc 111
>46731_miR166:micropc
Length = 85
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 66 tcggaccaggcttcattccc 85
>46726_miR166:micropc
Length = 84
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 65 tcggaccaggcttcattccc 84
>46722_miR166:micropc
Length = 98
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 77 tcggaccaggcttcattccc 96
>46652_miR166:micropc
Length = 105
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 86 tcggaccaggcttcattccc 105
>46646_miR166:micropc
Length = 100
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 81 tcggaccaggcttcattccc 100
>46621_miR166:micropc
Length = 148
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 129 tcggaccaggcttcattccc 148
>46618_miR166:micropc
Length = 108
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 89 tcggaccaggcttcattccc 108
>46579_miR166:micropc
Length = 78
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 58 tcggaccaggcttcattccc 77
>46502_miR166:micropc
Length = 97
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattccc 95
>46396_miR166:micropc
Length = 100
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 81 tcggaccaggcttcattccc 100
>46389_miR166:micropc
Length = 78
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 58 tcggaccaggcttcattccc 77
>46376_miR166:micropc
Length = 95
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattccc 95
>46338_miR166:micropc
Length = 84
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 65 tcggaccaggcttcattccc 84
>46289_miR166:micropc
Length = 108
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 89 tcggaccaggcttcattccc 108
>46239_miR166:micropc
Length = 148
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 129 tcggaccaggcttcattccc 148
>46216_miR166:micropc
Length = 84
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 65 tcggaccaggcttcattccc 84
>46212_miR166:micropc
Length = 95
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattccc 95
>46143_miR166:micropc
Length = 111
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 92 tcggaccaggcttcattccc 111
>46097_miR166:micropc
Length = 94
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 75 tcggaccaggcttcattccc 94
>46012_miR166:micropc
Length = 116
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 95 tcggaccaggcttcattccc 114
>46000_miR166:micropc
Length = 84
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 178 tcggaccaggcttcattccc 197
||||||||||||||||||||
Sbjct: 65 tcggaccaggcttcattccc 84