miRNEST 2.0, an integrative microRNA resource :: BLAST
>44968_miR408:micropc
Length = 110
Score = 218 bits (110), Expect = 7e-58
Identities = 110/110 (100%)
Strand = Plus / Plus
Query: 2 gctgggaaaaggcagagcaagaatgtagctattgacagaaatggtgaagtgagaatgaga 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctgggaaaaggcagagcaagaatgtagctattgacagaaatggtgaagtgagaatgaga 60
Query: 62 ggagagagatatctgttgtggctacgctcatgcactgcctcttccctggc 111
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggagagagatatctgttgtggctacgctcatgcactgcctcttccctggc 110
>44861_miR408:micropc
Length = 121
Score = 95.6 bits (48), Expect = 7e-21
Identities = 103/121 (85%), Gaps = 9/121 (7%)
Strand = Plus / Plus
Query: 1 ggctgggaaaaggcagagcaagaatgtagctattgacagaaa-tggtgaagtgagaatga 59
||||||||| |||||| ||| ||||| |||||| ||||||| |||| ||||||||||||
Sbjct: 1 ggctgggaacaggcagggcacgaatggagctatcaacagaaaatggtaaagtgagaatga 60
Query: 60 gaggagagagata--------tctgttgtggctacgctcatgcactgcctcttccctggc 111
|||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaggagagagagagagagagatctgttgtggctacgctcatgcactgcctcttccctggc 120
Query: 112 t 112
|
Sbjct: 121 t 121
>44821_miR408:micropc
Length = 119
Score = 91.7 bits (46), Expect = 1e-19
Identities = 101/119 (84%), Gaps = 9/119 (7%)
Strand = Plus / Plus
Query: 2 gctgggaaaaggcagagcaagaatgtagctattgacagaaa-tggtgaagtgagaatgag 60
|||||||| |||||| ||| ||||| |||||| ||||||| |||| ||||||||||||
Sbjct: 1 gctgggaacaggcagggcacgaatggagctatcaacagaaaatggtaaagtgagaatgaa 60
Query: 61 aggagagagata--------tctgttgtggctacgctcatgcactgcctcttccctggc 111
|||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggagagagagagagagagatctgttgtggctacgctcatgcactgcctcttccctggc 119
>45398_miR408:micropc
Length = 89
Score = 61.9 bits (31), Expect = 9e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 74 ctgttgtggctacgctcatgcactgcctcttccctggct 112
||||||||||| | |||||||||||||||||||||||||
Sbjct: 51 ctgttgtggctccactcatgcactgcctcttccctggct 89
>45860_miR408:micropc
Length = 87
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 74 ctgttgtggctacgctcatgcactgcctcttccctggc 111
||||||||||| | ||||||||||||||||||||||||
Sbjct: 50 ctgttgtggctccactcatgcactgcctcttccctggc 87
>45090_miR408:micropc
Length = 87
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 74 ctgttgtggctacgctcatgcactgcctcttccctggc 111
||||||||||| | ||||||||||||||||||||||||
Sbjct: 50 ctgttgtggctccactcatgcactgcctcttccctggc 87
>46359_miR408:micropc
Length = 85
Score = 56.0 bits (28), Expect = 6e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 73 tctgttgtggctacgctcatgcactgcctcttccctggct 112
|||||| ||||| | |||||||||||||||||||||||||
Sbjct: 46 tctgttttggcttcactcatgcactgcctcttccctggct 85
>46309_miR408:micropc
Length = 83
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 73 tctgttgtggctacgctcatgcactgcctcttccctggc 111
|||||| ||||| | ||||||||||||||||||||||||
Sbjct: 45 tctgttttggcttcactcatgcactgcctcttccctggc 83
>46155_miR408:micropc
Length = 83
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 73 tctgttgtggctacgctcatgcactgcctcttccctggc 111
|||||| ||||| | ||||||||||||||||||||||||
Sbjct: 45 tctgttttggcttcactcatgcactgcctcttccctggc 83
>45531_miR408:micropc
Length = 89
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 74 ctgttgtggctacgctcatgcactgcctcttccctggct 112
||||||||||| |||||||||||||||||||||||||
Sbjct: 51 ctgttgtggctctactcatgcactgcctcttccctggct 89
>46728_miR408:micropc
Length = 87
Score = 52.0 bits (26), Expect = 9e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 74 ctgttgtggctacgctcatgcactgcctcttccctggc 111
||||||||||| ||||||||||||||||||||||||
Sbjct: 50 ctgttgtggctctactcatgcactgcctcttccctggc 87
>46159_miR408:micropc
Length = 87
Score = 52.0 bits (26), Expect = 9e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 74 ctgttgtggctacgctcatgcactgcctcttccctggc 111
||||||||||| ||||||||||||||||||||||||
Sbjct: 50 ctgttgtggctctactcatgcactgcctcttccctggc 87
>45949_miR408:micropc
Length = 99
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 75 tgttgtggctacgctcatgcactgcctcttccctggc 111
|||||||||| ||||||||||||||||||||||||
Sbjct: 63 tgttgtggctctactcatgcactgcctcttccctggc 99
>45551_miR408:micropc
Length = 99
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 75 tgttgtggctacgctcatgcactgcctcttccctggc 111
|||||||||| ||||||||||||||||||||||||
Sbjct: 63 tgttgtggctctactcatgcactgcctcttccctggc 99
>45814_miR408:micropc
Length = 85
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 catgcactgcctcttccctggct 112
|||||||||||||||||||||||
Sbjct: 63 catgcactgcctcttccctggct 85
>45593_miR408:micropc
Length = 85
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 catgcactgcctcttccctggct 112
|||||||||||||||||||||||
Sbjct: 63 catgcactgcctcttccctggct 85
>46505_miR408:micropc
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 catgcactgcctcttccctggc 111
||||||||||||||||||||||
Sbjct: 62 catgcactgcctcttccctggc 83
>46401_miR408:micropc
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 catgcactgcctcttccctggc 111
||||||||||||||||||||||
Sbjct: 62 catgcactgcctcttccctggc 83
>46052_miR408:micropc
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 catgcactgcctcttccctggc 111
||||||||||||||||||||||
Sbjct: 62 catgcactgcctcttccctggc 83
>45726_miR408:micropc
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 90 catgcactgcctcttccctggc 111
||||||||||||||||||||||
Sbjct: 62 catgcactgcctcttccctggc 83
