miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46746_miR399:micropc
Length = 86
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 agtgcgattctcctttggcaggaatttggtattctgctgttaaccagtctgctaaactga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtgcgattctcctttggcaggaatttggtattctgctgttaaccagtctgctaaactga 61
Query: 61 tagctgccaaaggagaattgccct 84
||||||||||||||||||||||||
Sbjct: 62 tagctgccaaaggagaattgccct 85
>45072_miR399:micropc
Length = 86
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 agtgcgattctcctttggcaggaatttggtattctgctgttaaccagtctgctaaactga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agtgcgattctcctttggcaggaatttggtattctgctgttaaccagtctgctaaactga 61
Query: 61 tagctgccaaaggagaattgccct 84
||||||||||||||||||||||||
Sbjct: 62 tagctgccaaaggagaattgccct 85
>45028_miR399:micropc
Length = 84
Score = 167 bits (84), Expect = 2e-42
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 1 agtgcgattctcctttggcaggaatttggtattctgctgttaaccagtctgctaaactga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtgcgattctcctttggcaggaatttggtattctgctgttaaccagtctgctaaactga 60
Query: 61 tagctgccaaaggagaattgccct 84
||||||||||||||||||||||||
Sbjct: 61 tagctgccaaaggagaattgccct 84
>46617_miR399:micropc
Length = 122
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 65 tgccaaaggagaattgccct 84
||||||||||||||||||||
Sbjct: 103 tgccaaaggagaattgccct 122
>46471_miR399:micropc
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 65 tgccaaaggagaattgccct 84
||||||||||||||||||||
Sbjct: 70 tgccaaaggagaattgccct 89
>46409_miR399:micropc
Length = 112
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 65 tgccaaaggagaattgccct 84
||||||||||||||||||||
Sbjct: 93 tgccaaaggagaattgccct 112
>46133_miR399:micropc
Length = 124
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 65 tgccaaaggagaattgccct 84
||||||||||||||||||||
Sbjct: 104 tgccaaaggagaattgccct 123
>45856_miR399:micropc
Length = 124
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 65 tgccaaaggagaattgccct 84
||||||||||||||||||||
Sbjct: 104 tgccaaaggagaattgccct 123
>45711_miR399:micropc
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 65 tgccaaaggagaattgccct 84
||||||||||||||||||||
Sbjct: 70 tgccaaaggagaattgccct 89
>45532_miR399:micropc
Length = 114
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 65 tgccaaaggagaattgccct 84
||||||||||||||||||||
Sbjct: 94 tgccaaaggagaattgccct 113
>45183_miR399:micropc
Length = 114
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 65 tgccaaaggagaattgccct 84
||||||||||||||||||||
Sbjct: 94 tgccaaaggagaattgccct 113
>46699_miR399:micropc
Length = 120
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 tgccaaaggagaattgccc 83
|||||||||||||||||||
Sbjct: 102 tgccaaaggagaattgccc 120
>46490_miR399:micropc
Length = 86
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 tgccaaaggagaattgccc 83
|||||||||||||||||||
Sbjct: 68 tgccaaaggagaattgccc 86
>46173_miR399:micropc
Length = 86
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 tgccaaaggagaattgccc 83
|||||||||||||||||||
Sbjct: 68 tgccaaaggagaattgccc 86
>45456_miR399:micropc
Length = 110
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 65 tgccaaaggagaattgccc 83
|||||||||||||||||||
Sbjct: 92 tgccaaaggagaattgccc 110
