miRNEST 2.0, an integrative microRNA resource :: BLAST
>46111_miR398:micropc
Length = 76
Score = 151 bits (76), Expect = 8e-38
Identities = 76/76 (100%)
Strand = Plus / Plus
Query: 2 aggagcgacctgaaatcacatgtgggctgcaccctcctgggttatcttgggcaacatgtg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggagcgacctgaaatcacatgtgggctgcaccctcctgggttatcttgggcaacatgtg 60
Query: 62 ttctcaggtcgcccct 77
||||||||||||||||
Sbjct: 61 ttctcaggtcgcccct 76
>46116_miR398:micropc
Length = 77
Score = 115 bits (58), Expect = 5e-27
Identities = 74/78 (94%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 1 caggagcgacctgaaatcacatgtgggctgcaccctcctgggttatcttgggcaacatgt 60
||||||||||||| ||| ||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 1 caggagcgacctggaat-acatgtgggctccaccctcctgggttctcttgggcaacatgt 59
Query: 61 gttctcaggtcgcccctg 78
||||||||||||||||||
Sbjct: 60 gttctcaggtcgcccctg 77
>46303_miR398:micropc
Length = 75
Score = 111 bits (56), Expect = 7e-26
Identities = 72/76 (94%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 2 aggagcgacctgaaatcacatgtgggctgcaccctcctgggttatcttgggcaacatgtg 61
|||||||||||| ||| ||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 1 aggagcgacctggaat-acatgtgggctccaccctcctgggttctcttgggcaacatgtg 59
Query: 62 ttctcaggtcgcccct 77
||||||||||||||||
Sbjct: 60 ttctcaggtcgcccct 75
>45519_miR398:micropc
Length = 61
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 caggagcgacctgaaatcacatgtgggctgcac 33
|||||||||||||||||||||||||||||||||
Sbjct: 1 caggagcgacctgaaatcacatgtgggctgcac 33
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 ggcaacatgtgttctcaggtcgcccctg 78
||||||||||||||||||||||||||||
Sbjct: 34 ggcaacatgtgttctcaggtcgcccctg 61
>46304_miR398:micropc
Length = 59
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 2 aggagcgacctgaaatcacatgtgggctgcac 33
||||||||||||||||||||||||||||||||
Sbjct: 1 aggagcgacctgaaatcacatgtgggctgcac 32
Score = 54.0 bits (27), Expect = 1e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 ggcaacatgtgttctcaggtcgcccct 77
|||||||||||||||||||||||||||
Sbjct: 33 ggcaacatgtgttctcaggtcgcccct 59
>46550_miR398:micropc
Length = 61
Score = 61.9 bits (31), Expect = 6e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 caggagcgacctgaaatcacatgtgggctgc 31
|||||||||||||||||||||||||||||||
Sbjct: 1 caggagcgacctgaaatcacatgtgggctgc 31
Score = 48.1 bits (24), Expect = 9e-07
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 51 ggcaacatgtgttctcaggtcgcccctg 78
|||||||| |||||||||||||||||||
Sbjct: 34 ggcaacatttgttctcaggtcgcccctg 61
>46371_miR398:micropc
Length = 77
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 catgtgttctcaggtcgcccctg 78
|||||||||||||||||||||||
Sbjct: 55 catgtgttctcaggtcgcccctg 77
>46034_miR398:micropc
Length = 77
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 catgtgttctcaggtcgcccctg 78
|||||||||||||||||||||||
Sbjct: 55 catgtgttctcaggtcgcccctg 77
>45294_miR398:micropc
Length = 98
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 56 catgtgttctcaggtcgcccctg 78
|||||||||||||||||||||||
Sbjct: 76 catgtgttctcaggtcgcccctg 98
>46725_miR398:micropc
Length = 67
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 atgtgttctcaggtcgcccctg 78
||||||||||||||||||||||
Sbjct: 46 atgtgttctcaggtcgcccctg 67
>46690_miR398:micropc
Length = 75
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 catgtgttctcaggtcgcccct 77
||||||||||||||||||||||
Sbjct: 54 catgtgttctcaggtcgcccct 75
>46686_miR398:micropc
Length = 96
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 catgtgttctcaggtcgcccct 77
||||||||||||||||||||||
Sbjct: 75 catgtgttctcaggtcgcccct 96
>46604_miR398:micropc
Length = 67
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 atgtgttctcaggtcgcccctg 78
||||||||||||||||||||||
Sbjct: 46 atgtgttctcaggtcgcccctg 67
>46074_miR398:micropc
Length = 75
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 56 catgtgttctcaggtcgcccct 77
||||||||||||||||||||||
Sbjct: 54 catgtgttctcaggtcgcccct 75
>44891_miR398:micropc
Length = 89
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 57 atgtgttctcaggtcgcccctg 78
||||||||||||||||||||||
Sbjct: 68 atgtgttctcaggtcgcccctg 89
>46795_miR398:micropc
Length = 101
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccctg 78
|||||||||||||||||||||
Sbjct: 81 tgtgttctcaggtcgcccctg 101
>46392_miR398:micropc
Length = 68
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccctg 78
|||||||||||||||||||||
Sbjct: 48 tgtgttctcaggtcgcccctg 68
>46114_miR398:micropc
Length = 65
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 atgtgttctcaggtcgcccct 77
|||||||||||||||||||||
Sbjct: 45 atgtgttctcaggtcgcccct 65
>45920_miR398:micropc
Length = 104
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 catgtgttctcaggtcgcccc 76
|||||||||||||||||||||
Sbjct: 84 catgtgttctcaggtcgcccc 104
>45284_miR398:micropc
Length = 104
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 56 catgtgttctcaggtcgcccc 76
|||||||||||||||||||||
Sbjct: 84 catgtgttctcaggtcgcccc 104
>45192_miR398:micropc
Length = 65
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 atgtgttctcaggtcgcccct 77
|||||||||||||||||||||
Sbjct: 45 atgtgttctcaggtcgcccct 65
>45095_miR398:micropc
Length = 87
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 57 atgtgttctcaggtcgcccct 77
|||||||||||||||||||||
Sbjct: 67 atgtgttctcaggtcgcccct 87
>46367_miR398:micropc
Length = 73
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 gtgttctcaggtcgcccctg 78
||||||||||||||||||||
Sbjct: 54 gtgttctcaggtcgcccctg 73
>45930_miR398:micropc
Length = 63
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 gtgttctcaggtcgcccctg 78
||||||||||||||||||||
Sbjct: 44 gtgttctcaggtcgcccctg 63
>45898_miR398:micropc
Length = 66
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccct 77
||||||||||||||||||||
Sbjct: 47 tgtgttctcaggtcgcccct 66
>45694_miR398:micropc
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 tgtgttctcaggtcgcccct 77
||||||||||||||||||||
Sbjct: 80 tgtgttctcaggtcgcccct 99
>45087_miR398:micropc
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 59 gtgttctcaggtcgcccctg 78
||||||||||||||||||||
Sbjct: 65 gtgttctcaggtcgcccctg 84
>46124_miR398:micropc
Length = 97
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 56 catgtgttctcaggtcgcccctg 78
|||||||||||||||| ||||||
Sbjct: 75 catgtgttctcaggtcacccctg 97
>45384_miR398:micropc
Length = 83
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 59 gtgttctcaggtcgcccct 77
|||||||||||||||||||
Sbjct: 65 gtgttctcaggtcgcccct 83
>45380_miR398:micropc
Length = 108
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 56 catgtgttctcaggtcgcccctg 78
|||||||||||||||| ||||||
Sbjct: 86 catgtgttctcaggtcacccctg 108
>45163_miR398:micropc
Length = 71
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 59 gtgttctcaggtcgcccct 77
|||||||||||||||||||
Sbjct: 53 gtgttctcaggtcgcccct 71
>44941_miR398:micropc
Length = 61
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 59 gtgttctcaggtcgcccct 77
|||||||||||||||||||
Sbjct: 43 gtgttctcaggtcgcccct 61
