miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>44990_miR395:micropc
          Length = 117

 Score =  232 bits (117), Expect = 9e-62
 Identities = 117/117 (100%)
 Strand = Plus / Plus

                                                                       
Query: 50  gtgaagtgtttgggggaactcttagtgtcgccaagcatttaagtagatagtgtttaaact 109
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtgaagtgtttgggggaactcttagtgtcgccaagcatttaagtagatagtgtttaaact 60

                                                                    
Query: 110 acaagaaatgagagaaacgtttggtattatcaagagttctctttaagcacttcatac 166
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acaagaaatgagagaaacgtttggtattatcaagagttctctttaagcacttcatac 117




>46254_miR395:micropc
          Length = 115

 Score =  228 bits (115), Expect = 1e-60
 Identities = 115/115 (100%)
 Strand = Plus / Plus

                                                                       
Query: 51  tgaagtgtttgggggaactcttagtgtcgccaagcatttaagtagatagtgtttaaacta 110
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgaagtgtttgggggaactcttagtgtcgccaagcatttaagtagatagtgtttaaacta 60

                                                                  
Query: 111 caagaaatgagagaaacgtttggtattatcaagagttctctttaagcacttcata 165
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  caagaaatgagagaaacgtttggtattatcaagagttctctttaagcacttcata 115




>46230_miR395:micropc
          Length = 67

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 tgaagtgtttgggggaactc 70
          ||||||||||||||||||||
Sbjct: 48 tgaagtgtttgggggaactc 67




>45745_miR395:micropc
          Length = 67

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 tgaagtgtttgggggaactc 70
          ||||||||||||||||||||
Sbjct: 48 tgaagtgtttgggggaactc 67




>45586_miR395:micropc
          Length = 66

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 tgaagtgtttgggggaactc 70
          ||||||||||||||||||||
Sbjct: 47 tgaagtgtttgggggaactc 66




>45520_miR395:micropc
          Length = 66

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 tgaagtgtttgggggaactc 70
          ||||||||||||||||||||
Sbjct: 47 tgaagtgtttgggggaactc 66




>45105_miR395:micropc
          Length = 66

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 tgaagtgtttgggggaactc 70
          ||||||||||||||||||||
Sbjct: 47 tgaagtgtttgggggaactc 66