miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45363_miR166:micropc
Length = 197
Score = 190 bits (96), Expect = 3e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 103 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 161
Query: 163 tcttgatctggtgtcgtcggaccaggcttcattccc 198
||||||||||||||||||||||||||||||||||||
Sbjct: 162 tcttgatctggtgtcgtcggaccaggcttcattccc 197
Score = 143 bits (72), Expect = 6e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 2 gagggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggat 60
Query: 62 ctcttttctctc 73
||||||||||||
Sbjct: 61 ctcttttctctc 72
>45116_miR166:micropc
Length = 197
Score = 190 bits (96), Expect = 3e-49
Identities = 96/96 (100%)
Strand = Plus / Plus
Query: 103 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 161
Query: 163 tcttgatctggtgtcgtcggaccaggcttcattccc 198
||||||||||||||||||||||||||||||||||||
Sbjct: 162 tcttgatctggtgtcgtcggaccaggcttcattccc 197
Score = 143 bits (72), Expect = 6e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 2 gagggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggat 60
Query: 62 ctcttttctctc 73
||||||||||||
Sbjct: 61 ctcttttctctc 72
>45879_miR166:micropc
Length = 194
Score = 188 bits (95), Expect = 1e-48
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 103 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 159
Query: 163 tcttgatctggtgtcgtcggaccaggcttcattcc 197
|||||||||||||||||||||||||||||||||||
Sbjct: 160 tcttgatctggtgtcgtcggaccaggcttcattcc 194
Score = 139 bits (70), Expect = 9e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 4 gggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggatct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggatct 60
Query: 64 cttttctctc 73
||||||||||
Sbjct: 61 cttttctctc 70
>45567_miR166:micropc
Length = 194
Score = 188 bits (95), Expect = 1e-48
Identities = 95/95 (100%)
Strand = Plus / Plus
Query: 103 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 catcatagtcaacgcatctgatttcattgccttcgttgactagagatggtgatagatcat 159
Query: 163 tcttgatctggtgtcgtcggaccaggcttcattcc 197
|||||||||||||||||||||||||||||||||||
Sbjct: 160 tcttgatctggtgtcgtcggaccaggcttcattcc 194
Score = 139 bits (70), Expect = 9e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 4 gggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggatct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggatgttgtctggctccaggccactagagaaccttatggatctctcgatctatggatct 60
Query: 64 cttttctctc 73
||||||||||
Sbjct: 61 cttttctctc 70
>46431_miR166:micropc
Length = 153
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 173 gtgtcgtcggaccaggcttcattcccc 199
|||||||||||||||||||||||||||
Sbjct: 127 gtgtcgtcggaccaggcttcattcccc 153
>46741_miR166:micropc
Length = 151
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 173 gtgtcgtcggaccaggcttcattccc 198
||||||||||||||||||||||||||
Sbjct: 126 gtgtcgtcggaccaggcttcattccc 151
>46481_miR166:micropc
Length = 88
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 173 gtgtcgtcggaccaggcttcattccc 198
||||||||||||||||||||||||||
Sbjct: 63 gtgtcgtcggaccaggcttcattccc 88
>46390_miR166:micropc
Length = 151
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 173 gtgtcgtcggaccaggcttcattccc 198
||||||||||||||||||||||||||
Sbjct: 126 gtgtcgtcggaccaggcttcattccc 151
>46337_miR166:micropc
Length = 145
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 173 gtgtcgtcggaccaggcttcattccc 198
||||||||||||||||||||||||||
Sbjct: 120 gtgtcgtcggaccaggcttcattccc 145
>45905_miR166:micropc
Length = 100
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 173 gtgtcgtcggaccaggcttcattccc 198
||||||||||||||||||||||||||
Sbjct: 75 gtgtcgtcggaccaggcttcattccc 100
>45748_miR166:micropc
Length = 100
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 173 gtgtcgtcggaccaggcttcattccc 198
||||||||||||||||||||||||||
Sbjct: 75 gtgtcgtcggaccaggcttcattccc 100
>45518_miR166:micropc
Length = 131
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 173 gtgtcgtcggaccaggcttcattccc 198
||||||||||||||||||||||||||
Sbjct: 106 gtgtcgtcggaccaggcttcattccc 131
>45045_miR166:micropc
Length = 149
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 173 gtgtcgtcggaccaggcttcattcc 197
|||||||||||||||||||||||||
Sbjct: 125 gtgtcgtcggaccaggcttcattcc 149
>44943_miR166:micropc
Length = 149
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 173 gtgtcgtcggaccaggcttcattcc 197
|||||||||||||||||||||||||
Sbjct: 125 gtgtcgtcggaccaggcttcattcc 149
>46784_miR166:micropc
Length = 138
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 175 gtcgtcggaccaggcttcattccc 198
||||||||||||||||||||||||
Sbjct: 115 gtcgtcggaccaggcttcattccc 138
>46335_miR166:micropc
Length = 99
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 175 gtcgtcggaccaggcttcattccc 198
||||||||||||||||||||||||
Sbjct: 76 gtcgtcggaccaggcttcattccc 99
>46273_miR166:micropc
Length = 138
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 175 gtcgtcggaccaggcttcattccc 198
||||||||||||||||||||||||
Sbjct: 115 gtcgtcggaccaggcttcattccc 138
>46070_miR166:micropc
Length = 142
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 168 atctggtgtcgtcggaccaggcttcattcccc 199
|||| |||| ||||||||||||||||||||||
Sbjct: 111 atcttgtgttgtcggaccaggcttcattcccc 142
>45764_miR166:micropc
Length = 99
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 175 gtcgtcggaccaggcttcattccc 198
||||||||||||||||||||||||
Sbjct: 76 gtcgtcggaccaggcttcattccc 99
>45017_miR166:micropc
Length = 178
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 175 gtcgtcggaccaggcttcattccc 198
||||||||||||||||||||||||
Sbjct: 155 gtcgtcggaccaggcttcattccc 178
>44979_miR166:micropc
Length = 99
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 175 gtcgtcggaccaggcttcattccc 198
||||||||||||||||||||||||
Sbjct: 76 gtcgtcggaccaggcttcattccc 99
>46788_miR166:micropc
Length = 164
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 177 cgtcggaccaggcttcattcccc 199
|||||||||||||||||||||||
Sbjct: 142 cgtcggaccaggcttcattcccc 164
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 atgttgtctggctccaggccacta 30
|||||||||||||| |||||||||
Sbjct: 6 atgttgtctggctcgaggccacta 29
>45882_miR166:micropc
Length = 140
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 168 atctggtgtcgtcggaccaggcttcattccc 198
|||| |||| |||||||||||||||||||||
Sbjct: 110 atcttgtgttgtcggaccaggcttcattccc 140
>44922_miR166:micropc
Length = 78
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 177 cgtcggaccaggcttcattcccc 199
|||||||||||||||||||||||
Sbjct: 56 cgtcggaccaggcttcattcccc 78
>44803_miR166:micropc
Length = 140
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 168 atctggtgtcgtcggaccaggcttcattccc 198
|||| |||| |||||||||||||||||||||
Sbjct: 110 atcttgtgttgtcggaccaggcttcattccc 140
>46517_miR166:micropc
Length = 75
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 178 gtcggaccaggcttcattcccc 199
||||||||||||||||||||||
Sbjct: 54 gtcggaccaggcttcattcccc 75
>46248_miR166:micropc
Length = 76
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 177 cgtcggaccaggcttcattccc 198
||||||||||||||||||||||
Sbjct: 55 cgtcggaccaggcttcattccc 76
>46204_miR166:micropc
Length = 76
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 177 cgtcggaccaggcttcattccc 198
||||||||||||||||||||||
Sbjct: 55 cgtcggaccaggcttcattccc 76
>45434_miR166:micropc
Length = 138
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 168 atctggtgtcgtcggaccaggcttcattcc 197
|||| |||| ||||||||||||||||||||
Sbjct: 109 atcttgtgttgtcggaccaggcttcattcc 138
>44893_miR166:micropc
Length = 162
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 177 cgtcggaccaggcttcattccc 198
||||||||||||||||||||||
Sbjct: 141 cgtcggaccaggcttcattccc 162
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 atgttgtctggctccaggccacta 30
|||||||||||||| |||||||||
Sbjct: 5 atgttgtctggctcgaggccacta 28
>46809_miR166:micropc
Length = 88
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 67 tcggaccaggcttcattcccc 87
>46747_miR166:micropc
Length = 114
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 94 tcggaccaggcttcattcccc 114
>46722_miR166:micropc
Length = 98
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 77 tcggaccaggcttcattcccc 97
>46579_miR166:micropc
Length = 78
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 58 tcggaccaggcttcattcccc 78
>46502_miR166:micropc
Length = 97
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccc 96
>46444_miR166:micropc
Length = 73
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 178 gtcggaccaggcttcattccc 198
|||||||||||||||||||||
Sbjct: 53 gtcggaccaggcttcattccc 73
>46438_miR166:micropc
Length = 74
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 177 cgtcggaccaggcttcattcc 197
|||||||||||||||||||||
Sbjct: 54 cgtcggaccaggcttcattcc 74
>46389_miR166:micropc
Length = 78
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 58 tcggaccaggcttcattcccc 78
>46012_miR166:micropc
Length = 116
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 95 tcggaccaggcttcattcccc 115
>45909_miR166:micropc
Length = 88
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 67 tcggaccaggcttcattcccc 87
>45842_miR166:micropc
Length = 96
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 76 tcggaccaggcttcattcccc 96
>45781_miR166:micropc
Length = 117
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 178 gtcggaccaggcttcattccc 198
|||||||||||||||||||||
Sbjct: 97 gtcggaccaggcttcattccc 117
>45504_miR166:micropc
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 150 tcggaccaggcttcattcccc 170
>45480_miR166:micropc
Length = 88
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 67 tcggaccaggcttcattcccc 87
>45417_miR166:micropc
Length = 95
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 74 tcggaccaggcttcattcccc 94
>45364_miR166:micropc
Length = 86
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 66 tcggaccaggcttcattcccc 86
>45050_miR166:micropc
Length = 86
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 66 tcggaccaggcttcattcccc 86
>45042_miR166:micropc
Length = 78
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 58 tcggaccaggcttcattcccc 78
>45034_miR166:micropc
Length = 97
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 77 tcggaccaggcttcattcccc 97
>45033_miR166:micropc
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 150 tcggaccaggcttcattcccc 170
>45032_miR166:micropc
Length = 97
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 77 tcggaccaggcttcattcccc 97
>45008_miR166:micropc
Length = 73
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 178 gtcggaccaggcttcattccc 198
|||||||||||||||||||||
Sbjct: 53 gtcggaccaggcttcattccc 73
>44998_miR166:micropc
Length = 86
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 66 tcggaccaggcttcattcccc 86
>44949_miR166:micropc
Length = 114
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 94 tcggaccaggcttcattcccc 114
>44945_miR166:micropc
Length = 117
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 178 gtcggaccaggcttcattccc 198
|||||||||||||||||||||
Sbjct: 97 gtcggaccaggcttcattccc 117
>44898_miR166:micropc
Length = 116
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 179 tcggaccaggcttcattcccc 199
|||||||||||||||||||||
Sbjct: 95 tcggaccaggcttcattcccc 115
>44795_miR166:micropc
Length = 160
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 177 cgtcggaccaggcttcattcc 197
|||||||||||||||||||||
Sbjct: 140 cgtcggaccaggcttcattcc 160
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 7 atgttgtctggctccaggccacta 30
|||||||||||||| |||||||||
Sbjct: 4 atgttgtctggctcgaggccacta 27
