miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46728_miR408:micropc
          Length = 87

 Score =  172 bits (87), Expect = 3e-44
 Identities = 87/87 (100%)
 Strand = Plus / Plus

                                                                      
Query: 2  gacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggct 61
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggct 60

                                     
Query: 62 ctactcatgcactgcctcttccctggc 88
          |||||||||||||||||||||||||||
Sbjct: 61 ctactcatgcactgcctcttccctggc 87




>46159_miR408:micropc
          Length = 87

 Score =  172 bits (87), Expect = 3e-44
 Identities = 87/87 (100%)
 Strand = Plus / Plus

                                                                      
Query: 2  gacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggct 61
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggct 60

                                     
Query: 62 ctactcatgcactgcctcttccctggc 88
          |||||||||||||||||||||||||||
Sbjct: 61 ctactcatgcactgcctcttccctggc 87




>45398_miR408:micropc
          Length = 89

 Score =  121 bits (61), Expect = 9e-29
 Identities = 82/89 (92%)
 Strand = Plus / Plus

                                                                      
Query: 1  agacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggc 60
          |||||||||  ||||||||||||||||||||||||||||||| | |  ||||||||||||
Sbjct: 1  agacagggacgaggtagagcatggatggagttcccaacagaacagtcaagctgttgtggc 60

                                       
Query: 61 tctactcatgcactgcctcttccctggct 89
          || ||||||||||||||||||||||||||
Sbjct: 61 tccactcatgcactgcctcttccctggct 89




>45860_miR408:micropc
          Length = 87

 Score =  117 bits (59), Expect = 1e-27
 Identities = 80/87 (91%)
 Strand = Plus / Plus

                                                                      
Query: 2  gacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggct 61
          ||||||||  ||||||||||||||||||||||||||||||| | |  |||||||||||||
Sbjct: 1  gacagggacgaggtagagcatggatggagttcccaacagaacagtcaagctgttgtggct 60

                                     
Query: 62 ctactcatgcactgcctcttccctggc 88
          | |||||||||||||||||||||||||
Sbjct: 61 ccactcatgcactgcctcttccctggc 87




>45090_miR408:micropc
          Length = 87

 Score =  117 bits (59), Expect = 1e-27
 Identities = 80/87 (91%)
 Strand = Plus / Plus

                                                                      
Query: 2  gacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggct 61
          ||||||||  ||||||||||||||||||||||||||||||| | |  |||||||||||||
Sbjct: 1  gacagggacgaggtagagcatggatggagttcccaacagaacagtcaagctgttgtggct 60

                                     
Query: 62 ctactcatgcactgcctcttccctggc 88
          | |||||||||||||||||||||||||
Sbjct: 61 ccactcatgcactgcctcttccctggc 87




>45949_miR408:micropc
          Length = 99

 Score = 73.8 bits (37), Expect = 2e-14
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                               
Query: 52 tgttgtggctctactcatgcactgcctcttccctggc 88
          |||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgttgtggctctactcatgcactgcctcttccctggc 99




>45551_miR408:micropc
          Length = 99

 Score = 73.8 bits (37), Expect = 2e-14
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                               
Query: 52 tgttgtggctctactcatgcactgcctcttccctggc 88
          |||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgttgtggctctactcatgcactgcctcttccctggc 99




>45814_miR408:micropc
          Length = 85

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 75/89 (84%), Gaps = 4/89 (4%)
 Strand = Plus / Plus

                                                                      
Query: 1  agacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggc 60
          |||| ||||||||| ||||||||||||||| | | |||||||  | |    |||| ||||
Sbjct: 1  agacggggaacaggcagagcatggatggagctactaacagaagtaca----tgttttggc 56

                                       
Query: 61 tctactcatgcactgcctcttccctggct 89
          ||||| |||||||||||||||||||||||
Sbjct: 57 tctacccatgcactgcctcttccctggct 85




>46401_miR408:micropc
          Length = 83

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 70/83 (84%), Gaps = 4/83 (4%)
 Strand = Plus / Plus

                                                                      
Query: 6  gggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggctctac 65
          ||||||||| ||||||||||||||| | | |||||||  | |    |||| |||||||||
Sbjct: 5  gggaacaggcagagcatggatggagctactaacagaagtaca----tgttttggctctac 60

                                 
Query: 66 tcatgcactgcctcttccctggc 88
           ||||||||||||||||||||||
Sbjct: 61 ccatgcactgcctcttccctggc 83




>45726_miR408:micropc
          Length = 83

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 70/83 (84%), Gaps = 4/83 (4%)
 Strand = Plus / Plus

                                                                      
Query: 6  gggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggctctac 65
          ||||||||| ||||||||||||||| | | |||||||  | |    |||| |||||||||
Sbjct: 5  gggaacaggcagagcatggatggagctactaacagaagtaca----tgttttggctctac 60

                                 
Query: 66 tcatgcactgcctcttccctggc 88
           ||||||||||||||||||||||
Sbjct: 61 ccatgcactgcctcttccctggc 83




>45593_miR408:micropc
          Length = 85

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                
Query: 52 tgttgtggctctactcatgcactgcctcttccctggct 89
          |||| ||||||||| |||||||||||||||||||||||
Sbjct: 48 tgttttggctctacccatgcactgcctcttccctggct 85




>46505_miR408:micropc
          Length = 83

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                               
Query: 52 tgttgtggctctactcatgcactgcctcttccctggc 88
          |||| ||||||||| ||||||||||||||||||||||
Sbjct: 47 tgttttggctctacccatgcactgcctcttccctggc 83




>46052_miR408:micropc
          Length = 83

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                               
Query: 52 tgttgtggctctactcatgcactgcctcttccctggc 88
          |||| ||||||||| ||||||||||||||||||||||
Sbjct: 47 tgttttggctctacccatgcactgcctcttccctggc 83




>46359_miR408:micropc
          Length = 85

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                 
Query: 51 ctgttgtggctctactcatgcactgcctcttccctggct 89
          ||||| |||||  ||||||||||||||||||||||||||
Sbjct: 47 ctgttttggcttcactcatgcactgcctcttccctggct 85




>45394_miR408:micropc
          Length = 112

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 51  ctgttgtggctctactcatgcactgcctcttccctggct 89
           |||||||||||   |||||||||||||||||||||||||
Sbjct: 74  ctgttgtggctacgctcatgcactgcctcttccctggct 112




>44861_miR408:micropc
          Length = 121

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 51  ctgttgtggctctactcatgcactgcctcttccctggct 89
           |||||||||||   |||||||||||||||||||||||||
Sbjct: 83  ctgttgtggctacgctcatgcactgcctcttccctggct 121




>46309_miR408:micropc
          Length = 83

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                
Query: 51 ctgttgtggctctactcatgcactgcctcttccctggc 88
          ||||| |||||  |||||||||||||||||||||||||
Sbjct: 46 ctgttttggcttcactcatgcactgcctcttccctggc 83




>46155_miR408:micropc
          Length = 83

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                
Query: 51 ctgttgtggctctactcatgcactgcctcttccctggc 88
          ||||| |||||  |||||||||||||||||||||||||
Sbjct: 46 ctgttttggcttcactcatgcactgcctcttccctggc 83




>44968_miR408:micropc
          Length = 110

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 51  ctgttgtggctctactcatgcactgcctcttccctggc 88
           |||||||||||   ||||||||||||||||||||||||
Sbjct: 73  ctgttgtggctacgctcatgcactgcctcttccctggc 110




>44821_miR408:micropc
          Length = 119

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 51  ctgttgtggctctactcatgcactgcctcttccctggc 88
           |||||||||||   ||||||||||||||||||||||||
Sbjct: 82  ctgttgtggctacgctcatgcactgcctcttccctggc 119