miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>44942_miR528:micropc
          Length = 82

 Score = 89.7 bits (45), Expect = 3e-19
 Identities = 76/86 (88%), Gaps = 4/86 (4%)
 Strand = Plus / Plus

                                                                      
Query: 1  tggaaggggcatgcagaggagcaggaggtttggttggaagccgacctgcgctaccctcgg 60
          ||||||||||||||||||||||| |||| |||| ||||||||||||| ||    ||||| 
Sbjct: 1  tggaaggggcatgcagaggagcacgagggttggctggaagccgacctacg----cctcgc 56

                                    
Query: 61 ttgctctcctgtgcctgcctcttcca 86
          | ||||||||||||||||||||||||
Sbjct: 57 tggctctcctgtgcctgcctcttcca 82




>46551_miR528:micropc
          Length = 82

 Score = 73.8 bits (37), Expect = 2e-14
 Identities = 74/86 (86%), Gaps = 4/86 (4%)
 Strand = Plus / Plus

                                                                      
Query: 1  tggaaggggcatgcagaggagcaggaggtttggttggaagccgacctgcgctaccctcgg 60
          ||||||||||||||| |||||||  ||| |||| ||||||||||||| ||    ||||| 
Sbjct: 1  tggaaggggcatgcaaaggagcacaaggcttggctggaagccgacctacg----cctcgc 56

                                    
Query: 61 ttgctctcctgtgcctgcctcttcca 86
          | ||||||||||||||||||||||||
Sbjct: 57 tggctctcctgtgcctgcctcttcca 82




>45035_miR528:micropc
          Length = 92

 Score = 73.8 bits (37), Expect = 2e-14
 Identities = 78/92 (84%), Gaps = 6/92 (6%)
 Strand = Plus / Plus

                                                                      
Query: 1  tggaaggggcatgcagaggagcaggaggtttggttggaagccgacctgcgcta------c 54
          ||||||||||||||||||||||| |||| |||| |  ||||||||||| ||||      |
Sbjct: 1  tggaaggggcatgcagaggagcacgaggcttggctaaaagccgacctgtgctatgctacc 60

                                          
Query: 55 cctcggttgctctcctgtgcctgcctcttcca 86
          ||||| | ||||||||||||||||||||||||
Sbjct: 61 cctcgctggctctcctgtgcctgcctcttcca 92




>45655_miR528:micropc
          Length = 84

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 1  tggaaggggcatgcagaggagcaggag 27
          |||||||||||||||||||||||||||
Sbjct: 1  tggaaggggcatgcagaggagcaggag 27



 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 64 ctctcctgtgcctgcctcttcca 86
          ||||||||||| |||||||||||
Sbjct: 62 ctctcctgtgcttgcctcttcca 84




>46253_miR528:micropc
          Length = 117

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 1  tggaaggggcatgcagaggagca 23
          |||||||||||||||||||||||
Sbjct: 1  tggaaggggcatgcagaggagca 23



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 64  ctctcctgtgcctgcctcttcca 86
           |||||||||||||||||||||||
Sbjct: 95  ctctcctgtgcctgcctcttcca 117




>46295_miR528:micropc
          Length = 103

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 1  tggaaggggcatgcagaggag 21
          |||||||||||||||||||||
Sbjct: 1  tggaaggggcatgcagaggag 21