miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46080_miR809:micropc
Length = 99
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1 attttagtatttcccacattcatattgatgctgatgatctagatagatatatatgtctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attttagtatttcccacattcatattgatgctgatgatctagatagatatatatgtctat 60
Query: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attcattaccatcaatatgaatgtgagaaatgctagaat 99
>45342_miR809:micropc
Length = 100
Score = 87.7 bits (44), Expect = 1e-18
Identities = 81/92 (88%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||| ||||||||| ||| | |||| ||||||| |||||||||||||| |||| ||
Sbjct: 92 atttcccatattcatattaatgttaatgaatctagatggatatatatgtctagattcgtt 33
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||||||||||||| |||||||||| |||||
Sbjct: 32 agcatcaatatgaatatgagaaatgccagaat 1
Score = 48.1 bits (24), Expect = 1e-06
Identities = 76/92 (82%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatg-atctagatagatatatatgtctatattcatt 67
||||| || ||||||||||||||| | | ||||||| | |||||| |||| |||||||
Sbjct: 9 atttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcatt 68
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||| ||||||||| || |||||| ||||||
Sbjct: 69 aacattaatatgaatatgggaaatgttagaat 100
>46758_miR808:micropc
Length = 98
Score = 85.7 bits (43), Expect = 5e-18
Identities = 80/91 (87%), Gaps = 1/91 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||| ||||||||| ||| | |||| ||||||| |||||||||||||| |||| ||
Sbjct: 91 atttcccatattcatattaatgttaatgaatctagatggatatatatgtctagattcgtt 32
Query: 68 accatcaatatgaatgtgagaaatgctagaa 98
| ||||||||||||| |||||||||| ||||
Sbjct: 31 agcatcaatatgaatatgagaaatgccagaa 1
Score = 46.1 bits (23), Expect = 5e-06
Identities = 75/91 (82%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatg-atctagatagatatatatgtctatattcatt 67
||||| || ||||||||||||||| | | ||||||| | |||||| |||| |||||||
Sbjct: 8 atttctcatattcatattgatgctaacgaatctagacatatatatccatctagattcatt 67
Query: 68 accatcaatatgaatgtgagaaatgctagaa 98
| ||| ||||||||| || |||||| |||||
Sbjct: 68 aacattaatatgaatatgggaaatgttagaa 98
>45708_miR809:micropc
Length = 100
Score = 85.7 bits (43), Expect = 5e-18
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaat 91
||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||
Sbjct: 38 atctagatagatatatatgtctagattcattagcatcaatataaatgtgagaaat 92
Score = 63.9 bits (32), Expect = 2e-11
Identities = 78/92 (84%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
||||| |||||| ||||||||||| |||| |||||| | |||||| | |||| |||||||
Sbjct: 92 atttctcacatttatattgatgctaatgaatctagacatatatatctatctagattcatt 33
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| |||||||||||| ||| ||||| ||||||
Sbjct: 32 aatatcaatatgaatatgaaaaatgttagaat 1
>45522_miR809:micropc
Length = 100
Score = 79.8 bits (40), Expect = 3e-16
Identities = 80/92 (86%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
||||||||||||| | |||||| | |||| |||||||||||| ||||||||| |||||||
Sbjct: 92 atttcccacattcgtgttgatgttaatgaatctagatagatacatatgtctagattcatt 33
Query: 68 accatcaatatgaatgtgagaaatgctagaat 99
| ||||| || ||||||| ||||||||||||
Sbjct: 32 aacatcattacgaatgtggaaaatgctagaat 1
>46801_miR809:micropc
Length = 110
Score = 77.8 bits (39), Expect = 1e-15
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||||||||||||| ||| | |||| ||||||||||||||||||| || |||||||
Sbjct: 9 atttcccacattcatattaatgttaatgaatctagatagatatatatgtttagattcatt 68
Query: 68 accatcaatat 78
| |||||||||
Sbjct: 69 aacatcaatat 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 46/53 (86%)
Strand = Plus / Minus
Query: 47 atatatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
|||||| | |||| |||||||| ||| |||||||||||| |||||| ||||||
Sbjct: 53 atatatctatctagattcattaacattaatatgaatgtgggaaatgatagaat 1
>46637_miR446:micropc
Length = 80
Score = 73.8 bits (37), Expect = 2e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 10 tttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatta 68
||||||| ||||||||||||| | |||| ||||| |||||||||||||||| ||||||||
Sbjct: 80 tttcccatattcatattgatgttaatgaatctagctagatatatatgtctagattcatta 21
Query: 69 ccatcaatatgaa 81
||| ||||||||
Sbjct: 20 acattaatatgaa 8
>46833_miR446:micropc
Length = 81
Score = 69.9 bits (35), Expect = 3e-13
Identities = 63/71 (88%), Gaps = 1/71 (1%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||| ||||||||||||||||| | |||| | ||||||||||| |||||||| |||||||
Sbjct: 80 attttccacattcatattgatgttaatgaatttagatagatatgtatgtctagattcatt 21
Query: 68 accatcaatat 78
| |||||||||
Sbjct: 20 aacatcaatat 10
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 56 tctatattcattaccatcaatatgaatgtg 85
|||| |||||||| ||||||||||||||||
Sbjct: 45 tctaaattcattaacatcaatatgaatgtg 74
>45913_miR809:micropc
Length = 100
Score = 69.9 bits (35), Expect = 3e-13
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgctag 96
|||||||||||||||||| | || |||||||| |||||||||||||||| |||||| |||
Sbjct: 39 atctagatagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttag 97
Query: 97 aat 99
|||
Sbjct: 98 aat 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 79/93 (84%), Gaps = 3/93 (3%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatg-atctagatagatatatatgtctatattcatt 67
|||||||||||||||||||||| | ||| ||||| | | |||||| | |||| ||| |||
Sbjct: 92 atttcccacattcatattgatgttaatgaatcta-aaatatatatctatctagatttatt 34
Query: 68 accatc-aatatgaatgtgagaaatgctagaat 99
| |||| |||||||||| || ||||||||||||
Sbjct: 33 aacatcaaatatgaatgcgaaaaatgctagaat 1
>46775_miR808:micropc
Length = 98
Score = 67.9 bits (34), Expect = 1e-12
Identities = 56/62 (90%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgctag 96
|||||||||||||||||| | || |||||||| |||||||||||||||| |||||| |||
Sbjct: 38 atctagatagatatatattt-tagattcattaacatcaatatgaatgtgggaaatgttag 96
Query: 97 aa 98
||
Sbjct: 97 aa 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 78/92 (84%), Gaps = 3/92 (3%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatgctgatg-atctagatagatatatatgtctatattcatt 67
|||||||||||||||||||||| | ||| ||||| | | |||||| | |||| ||| |||
Sbjct: 91 atttcccacattcatattgatgttaatgaatcta-aaatatatatctatctagatttatt 33
Query: 68 accatc-aatatgaatgtgagaaatgctagaa 98
| |||| |||||||||| || |||||||||||
Sbjct: 32 aacatcaaatatgaatgcgaaaaatgctagaa 1
>45995_miR446:micropc
Length = 86
Score = 63.9 bits (32), Expect = 2e-11
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatg 92
|||||||||||||||||| | || |||||||| |||||||||||||||| ||||||
Sbjct: 32 atctagatagatatatattt-tagattcattaacatcaatatgaatgtgggaaatg 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 85 atttcccacattcatattgatg 64
>45717_miR446:micropc
Length = 86
Score = 63.9 bits (32), Expect = 2e-11
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatg 92
|||||||||||||||||| | || |||||||| |||||||||||||||| ||||||
Sbjct: 32 atctagatagatatatattt-tagattcattaacatcaatatgaatgtgggaaatg 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 85 atttcccacattcatattgatg 64
>45176_miR446:micropc
Length = 86
Score = 63.9 bits (32), Expect = 2e-11
Identities = 51/56 (91%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatg 92
|||||||||||||||||| | || |||||||| |||||||||||||||| ||||||
Sbjct: 32 atctagatagatatatattt-tagattcattaacatcaatatgaatgtgggaaatg 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 85 atttcccacattcatattgatg 64
>46336_miR809:micropc
Length = 98
Score = 61.9 bits (31), Expect = 8e-11
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 49 atatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||||||| |||||||| || ||||||||||||| ||||||||||||
Sbjct: 48 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaat 98
>45839_miR809:micropc
Length = 98
Score = 61.9 bits (31), Expect = 8e-11
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 49 atatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||||||||| |||||||| || ||||||||||||| ||||||||||||
Sbjct: 48 atatatgtctagattcattaatataaatatgaatgtgaaaaatgctagaat 98
>46589_miR809:micropc
Length = 100
Score = 54.0 bits (27), Expect = 2e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 37 atctagatagatatatatgtctatattcattaccatcaatatgaatgtgagaaatgctag 96
|||||||||||||||||| | || |||||||| ||| ||||||| |||| ||||| |||
Sbjct: 38 atctagatagatatatatttttagattcattaatatcgatatgaacgtgaaaaatgttag 97
Query: 97 aat 99
|||
Sbjct: 98 aat 100
>46318_miR446:micropc
Length = 86
Score = 54.0 bits (27), Expect = 2e-08
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 9 atttcccacattcatattgatgctgatga-tctagatagatatatatgtctatattcatt 67
|||||||| ||| ||| ||||| | |||| |||| ||||||||||||||||| ||| |||
Sbjct: 2 atttcccatatttataatgatgttaatgaatctatatagatatatatgtctagatttatt 61
Query: 68 accatcaatatgaat 82
| | |||||||||||
Sbjct: 62 aacgtcaatatgaat 76
>46060_miR809:micropc
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 65 attaccatcaatatgaatgtgagaaatgctagaat 99
|||| ||||||||| ||||||||||||||||||||
Sbjct: 53 attaacatcaatataaatgtgagaaatgctagaat 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 55 gtctatattcattaccatcaatatgaatgtgagaaatgctagaat 99
||||| |||||||| ||||||||||||| || ||||||||||||
Sbjct: 45 gtctagattcattaacatcaatatgaatatggaaaatgctagaat 1
>45731_miR446:micropc
Length = 86
Score = 52.0 bits (26), Expect = 8e-08
Identities = 63/74 (85%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 13 cccacattcatattgatgctgatg-atctagatagatatatatgtctatattcattacca 71
|||||||||||||||||| | ||| ||||||| | | |||||||| || |||||||| |
Sbjct: 81 cccacattcatattgatgttaatgaatctagacacacatatatgtttagattcattaaaa 22
Query: 72 tcaatatgaatgtg 85
|| |||||||||||
Sbjct: 21 tctatatgaatgtg 8
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 54 tgtctatattcattaccatcaatatgaatgtg 85
|||||| |||||||| ||||||||||||||||
Sbjct: 48 tgtctagattcattaacatcaatatgaatgtg 79
>45998_miR446:micropc
Length = 53
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 70 catcaatatgaatgtgagaaatgctagaa 98
||||||||||||| |||||||||||||||
Sbjct: 1 catcaatatgaatatgagaaatgctagaa 29
>46670_miR809:micropc
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 49 atatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaa 98
||||||||||| |||||||| ||| ||||||||||| | |||| |||||
Sbjct: 48 atatatgtctacattcattaacatatatatgaatgtgggtaatgttagaa 97
>46468_miR446:micropc
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 62 ttcattaccatcaatatgaatgtgagaaat 91
||||||| |||||||||||||||| |||||
Sbjct: 48 ttcattaacatcaatatgaatgtgggaaat 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 atttcccacattcatattgatg 30
||||||||||||||||||||||
Sbjct: 77 atttcccacattcatattgatg 56
>44980_miR808:micropc
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 49 atatatgtctatattcattaccatcaatatgaatgtgagaaatgctagaa 98
||||||||||| |||||||| ||| ||||||||||| | |||| |||||
Sbjct: 48 atatatgtctacattcattaacatatatatgaatgtgggtaatgttagaa 97
