miRNEST 2.0, an integrative microRNA resource :: BLAST
>46801_miR809:micropc
Length = 110
Score = 87.7 bits (44), Expect = 1e-18
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 15 atatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatga 74
|||| ||| ||||||||||||||||||||| | | ||||||||||||||||| |||||||
Sbjct: 79 atattgatgttaatgaatctaaacatatatatctatctagattcattaacattaatatga 20
Query: 75 atgtgggcaatg 86
||||||| ||||
Sbjct: 19 atgtgggaaatg 8
Score = 60.0 bits (30), Expect = 3e-10
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| || |||||||||||| | | |||| | ||| |||||||||||||||
Sbjct: 14 ccacattcatattaatgttaatgaatctagatagatatatatgtttagattcattaacat 73
Query: 67 caatat 72
||||||
Sbjct: 74 caatat 79
>46670_miR809:micropc
Length = 97
Score = 81.8 bits (41), Expect = 7e-17
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
||||||||||||| || ||||||||| || ||||||||||||||||||||| ||||||||
Sbjct: 85 ccacattcatatatatgttaatgaatgtagacatatatgtgtgtctagatttattaacat 26
Query: 67 c 67
|
Sbjct: 25 c 25
Score = 52.0 bits (26), Expect = 6e-08
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 17 atagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaat 76
|||||| ||||| |||||| ||| | || | |||||| |||||||||||| ||||||||
Sbjct: 22 atagatgttaataaatctagacacacatatatgtctacattcattaacatatatatgaat 81
Query: 77 gtgggcaatg 86
||||| ||||
Sbjct: 82 gtgggtaatg 91
>44980_miR808:micropc
Length = 97
Score = 81.8 bits (41), Expect = 7e-17
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
||||||||||||| || ||||||||| || ||||||||||||||||||||| ||||||||
Sbjct: 85 ccacattcatatatatgttaatgaatgtagacatatatgtgtgtctagatttattaacat 26
Query: 67 c 67
|
Sbjct: 25 c 25
Score = 52.0 bits (26), Expect = 6e-08
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 17 atagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaat 76
|||||| ||||| |||||| ||| | || | |||||| |||||||||||| ||||||||
Sbjct: 22 atagatgttaataaatctagacacacatatatgtctacattcattaacatatatatgaat 81
Query: 77 gtgggcaatg 86
||||| ||||
Sbjct: 82 gtgggtaatg 91
>46833_miR446:micropc
Length = 81
Score = 79.8 bits (40), Expect = 3e-16
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
|||| ||||||||||||| ||| ||||||||| || | | |||||| |||||||||||||
Sbjct: 81 cattttccacattcatattgatgttaatgaatttagatagatatgtatgtctagattcat 22
Query: 61 taacatcaatat 72
||||||||||||
Sbjct: 21 taacatcaatat 10
Score = 67.9 bits (34), Expect = 1e-12
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 15 atatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatga 74
|||| ||| |||||||||||| ||||| || | | |||| ||||||||||||||||||||
Sbjct: 10 atattgatgttaatgaatctagacatacatatctatctaaattcattaacatcaatatga 69
Query: 75 atgtgg 80
||||||
Sbjct: 70 atgtgg 75
>45260_miR819:micropc
Length = 116
Score = 73.8 bits (37), Expect = 2e-14
Identities = 64/72 (88%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
|||| |||| ||||||||| || |||||||||||||||||||| |||||||| ||||||
Sbjct: 17 cattatccatattcatatatatgttaatgaatctaaacatata--tgtgtctatattcat 74
Query: 61 taacatcaatat 72
||||||| ||||
Sbjct: 75 taacatctatat 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 60/72 (83%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 5 gtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaac 64
||||| ||| |||||||| ||||||||| || ||| |||| ||| | ||||||||||||
Sbjct: 96 gtccatatttatatagatgttaatgaatatagacacatatatgttt--agattcattaac 39
Query: 65 atcaatatgaat 76
|| ||||||||
Sbjct: 38 atatatatgaat 27
>45075_miR819:micropc
Length = 116
Score = 73.8 bits (37), Expect = 2e-14
Identities = 64/72 (88%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
|||| |||| ||||||||| || |||||||||||||||||||| |||||||| ||||||
Sbjct: 17 cattatccatattcatatatatgttaatgaatctaaacatata--tgtgtctatattcat 74
Query: 61 taacatcaatat 72
||||||| ||||
Sbjct: 75 taacatctatat 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 60/72 (83%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 5 gtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaac 64
||||| ||| |||||||| ||||||||| || ||| |||| ||| | ||||||||||||
Sbjct: 96 gtccatatttatatagatgttaatgaatatagacacatatatgttt--agattcattaac 39
Query: 65 atcaatatgaat 76
|| ||||||||
Sbjct: 38 atatatatgaat 27
>44978_miR1130:micropc
Length = 144
Score = 71.9 bits (36), Expect = 7e-14
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||||||| | ||| |||||||||||||||||||| ||||||||||| ||| ||
Sbjct: 105 attcatatagatgtcaataaatctaaacatatatgtgtgcttagattcattagcatatat 46
Query: 71 atgaatgtgggcaatg 86
|| ||||||| |||||
Sbjct: 45 ataaatgtggacaatg 30
Score = 48.1 bits (24), Expect = 1e-06
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||||||||||| ||||| || |||||||||||| || | || | ||| |||||| ||
Sbjct: 30 cattgtccacatttatatatatgctaatgaatctaagcacacatatatgtttagatttat 89
Query: 61 taacatcaatatgaat 76
| ||||| ||||||||
Sbjct: 90 tgacatctatatgaat 105
>46464_miR1132:micropc
Length = 149
Score = 69.9 bits (35), Expect = 3e-13
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||||||| |||||||||||| ||||||| ||||| ||||||||||||| || ||
Sbjct: 42 attcatatagatattaatgaatctaggcatatatatgtgtttagattcattaacttctat 101
Query: 71 atgaatgtggg 81
|| ||| ||||
Sbjct: 102 ataaatatggg 112
Score = 63.9 bits (32), Expect = 2e-11
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 15 atatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatga 74
||||||| |||||||||||||||| |||| | || ||||||||||||| ||| ||||||
Sbjct: 103 atatagaagttaatgaatctaaacacatatatatgcctagattcattaatatctatatga 44
Query: 75 atgtgggcaatg 86
|| || ||||||
Sbjct: 43 atatgtgcaatg 32
>45514_miR1132:micropc
Length = 149
Score = 69.9 bits (35), Expect = 3e-13
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||||||| |||||||||||| ||||||| ||||| ||||||||||||| || ||
Sbjct: 42 attcatatagatattaatgaatctaggcatatatatgtgtttagattcattaacttctat 101
Query: 71 atgaatgtggg 81
|| ||| ||||
Sbjct: 102 ataaatatggg 112
Score = 63.9 bits (32), Expect = 2e-11
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 15 atatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatga 74
||||||| |||||||||||||||| |||| | || ||||||||||||| ||| ||||||
Sbjct: 103 atatagaagttaatgaatctaaacacatatatatgcctagattcattaatatctatatga 44
Query: 75 atgtgggcaatg 86
|| || ||||||
Sbjct: 43 atatgtgcaatg 32
>45099_miR1132:micropc
Length = 149
Score = 69.9 bits (35), Expect = 3e-13
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||||||| |||||||||||| ||||||| ||||| ||||||||||||| || ||
Sbjct: 42 attcatatagatattaatgaatctaggcatatatatgtgtttagattcattaacttctat 101
Query: 71 atgaatgtggg 81
|| ||| ||||
Sbjct: 102 ataaatatggg 112
Score = 63.9 bits (32), Expect = 2e-11
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 15 atatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatga 74
||||||| |||||||||||||||| |||| | || ||||||||||||| ||| ||||||
Sbjct: 103 atatagaagttaatgaatctaaacacatatatatgcctagattcattaatatctatatga 44
Query: 75 atgtgggcaatg 86
|| || ||||||
Sbjct: 43 atatgtgcaatg 32
>46637_miR446:micropc
Length = 80
Score = 67.9 bits (34), Expect = 1e-12
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 24 ttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatgaatgtggg 81
|||||||||||| |||||||| | | |||||||||||||||||||||||||| ||||
Sbjct: 20 ttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatggg 77
Score = 58.0 bits (29), Expect = 1e-09
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||| ||| |||||||||||| | |||| | ||||||||||||||||||| |||
Sbjct: 72 attcatattgatgttaatgaatctagctagatatatatgtctagattcattaacattaat 13
Query: 71 atgaa 75
|||||
Sbjct: 12 atgaa 8
>45522_miR809:micropc
Length = 100
Score = 67.9 bits (34), Expect = 1e-12
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
|||| ||||||||| || ||| |||||||||||| |||||| | | | |||||||||||
Sbjct: 8 cattttccacattcgtaatgatgttaatgaatctagacatatgtatctatctagattcat 67
Query: 61 taacatcaatatgaatgtgggcaatg 86
||||||||| | ||||||||| ||||
Sbjct: 68 taacatcaacacgaatgtgggaaatg 93
Score = 52.0 bits (26), Expect = 6e-08
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||| | | ||| |||||||||||| | | ||| | |||||||||||||||||||
Sbjct: 87 ccacattcgtgttgatgttaatgaatctagatagatacatatgtctagattcattaacat 28
Query: 67 caatatgaatgtgg 80
|| || ||||||||
Sbjct: 27 cattacgaatgtgg 14
>45708_miR809:micropc
Length = 100
Score = 65.9 bits (33), Expect = 4e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||| ||| |||||||||||| | | |||| | ||||||||||||||| |||||||
Sbjct: 18 attcatattgatattaatgaatctagatagatatatatgtctagattcattagcatcaat 77
Query: 71 atgaatgtg 79
|| ||||||
Sbjct: 78 ataaatgtg 86
Score = 65.9 bits (33), Expect = 4e-12
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 8 cacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatc 67
|||||| |||| ||| ||||||||||| |||||||| | | |||||||||||||| |||
Sbjct: 86 cacatttatattgatgctaatgaatctagacatatatatctatctagattcattaatatc 27
Query: 68 aatatgaat 76
|||||||||
Sbjct: 26 aatatgaat 18
>46775_miR808:micropc
Length = 98
Score = 63.9 bits (32), Expect = 2e-11
Identities = 64/72 (88%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||||| |||||| | | |||||||| ||||||||
Sbjct: 86 ccacattcatattgatgttaatgaatctaaa-atatatatctatctagatttattaacat 28
Query: 67 c-aatatgaatg 77
| ||||||||||
Sbjct: 27 caaatatgaatg 16
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||| ||||
Sbjct: 58 tagattcattaacatcaatatgaatgtgggaaatg 92
>45995_miR446:micropc
Length = 86
Score = 63.9 bits (32), Expect = 2e-11
Identities = 64/72 (88%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||||| |||||| | | |||||||| ||||||||
Sbjct: 80 ccacattcatattgatgttaatgaatctaaa-atatatatctatctagatttattaacat 22
Query: 67 c-aatatgaatg 77
| ||||||||||
Sbjct: 21 caaatatgaatg 10
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||| ||||
Sbjct: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
>45913_miR809:micropc
Length = 100
Score = 63.9 bits (32), Expect = 2e-11
Identities = 64/72 (88%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||||| |||||| | | |||||||| ||||||||
Sbjct: 87 ccacattcatattgatgttaatgaatctaaa-atatatatctatctagatttattaacat 29
Query: 67 c-aatatgaatg 77
| ||||||||||
Sbjct: 28 caaatatgaatg 17
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||| ||||
Sbjct: 59 tagattcattaacatcaatatgaatgtgggaaatg 93
>45717_miR446:micropc
Length = 86
Score = 63.9 bits (32), Expect = 2e-11
Identities = 64/72 (88%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||||| |||||| | | |||||||| ||||||||
Sbjct: 80 ccacattcatattgatgttaatgaatctaaa-atatatatctatctagatttattaacat 22
Query: 67 c-aatatgaatg 77
| ||||||||||
Sbjct: 21 caaatatgaatg 10
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||| ||||
Sbjct: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
>45176_miR446:micropc
Length = 86
Score = 63.9 bits (32), Expect = 2e-11
Identities = 64/72 (88%), Gaps = 2/72 (2%)
Strand = Plus / Minus
Query: 7 ccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacat 66
|||||||||||| ||| |||||||||||||| |||||| | | |||||||| ||||||||
Sbjct: 80 ccacattcatattgatgttaatgaatctaaa-atatatatctatctagatttattaacat 22
Query: 67 c-aatatgaatg 77
| ||||||||||
Sbjct: 21 caaatatgaatg 10
Score = 61.9 bits (31), Expect = 7e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 52 tagattcattaacatcaatatgaatgtgggcaatg 86
|||||||||||||||||||||||||||||| ||||
Sbjct: 52 tagattcattaacatcaatatgaatgtgggaaatg 86
>46589_miR809:micropc
Length = 100
Score = 61.9 bits (31), Expect = 7e-11
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 12 ttcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaata 71
||||||| ||| |||||||||||||| |||||| | | |||||||| |||||||||| ||
Sbjct: 82 ttcatatcgatattaatgaatctaaaaatatatatctatctagatttattaacatcatta 23
Query: 72 tgaatgt 78
| |||||
Sbjct: 22 taaatgt 16
>45215_miR1120:micropc
Length = 142
Score = 58.0 bits (29), Expect = 1e-09
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 14 catatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaatatg 73
||||||||| ||||||||| |||||| ||| | | ||||||||||||||||| | |||
Sbjct: 101 catatagatgttaatgaatttaaacacataaatatatctagattcattaacatataaatg 42
Query: 74 aatgtgggcaatg 86
|| ||||||||||
Sbjct: 41 aacgtgggcaatg 29
Score = 52.0 bits (26), Expect = 6e-08
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
||||| |||| ||||| || || |||||||||||| | |||| | ||||| || ||||||
Sbjct: 29 cattgcccacgttcatttatatgttaatgaatctagatatatttatgtgtttaaattcat 88
Query: 61 taacatcaatatgaatgtgggcaatg 86
||||||| ||||| || || ||||||
Sbjct: 89 taacatctatatgtatatgagcaatg 114
>46758_miR808:micropc
Length = 98
Score = 56.0 bits (28), Expect = 4e-09
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||| ||| ||| ||||||| |||||||| | ||||||||||||||||| |||
Sbjct: 17 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 76
Query: 71 atgaatgtgggcaatg 86
|||||| |||| ||||
Sbjct: 77 atgaatatgggaaatg 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||| || |||||||||||| | |||| | ||||||||||| ||| |||||||
Sbjct: 82 attcatattaatgttaatgaatctagatggatatatatgtctagattcgttagcatcaat 23
Query: 71 atgaat 76
||||||
Sbjct: 22 atgaat 17
>46060_miR809:micropc
Length = 87
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 49 gtctagattcattaacatcaatatgaat 76
||||||||||||||||||||||||||||
Sbjct: 45 gtctagattcattaacatcaatatgaat 18
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 51 ctagattcattaacatcaatatgaatgtg 79
||||||| |||||||||||||| ||||||
Sbjct: 45 ctagatttattaacatcaatataaatgtg 73
Score = 38.2 bits (19), Expect = 0.001
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 1 cattgtccacattcatatagattttaatgaatcta 35
|||| |||| |||||||| ||| ||||||||||||
Sbjct: 8 cattttccatattcatattgatgttaatgaatcta 42
>45342_miR809:micropc
Length = 100
Score = 56.0 bits (28), Expect = 4e-09
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||| ||| ||| ||||||| |||||||| | ||||||||||||||||| |||
Sbjct: 18 attcatattgatgctaacgaatctagacatatatatccatctagattcattaacattaat 77
Query: 71 atgaatgtgggcaatg 86
|||||| |||| ||||
Sbjct: 78 atgaatatgggaaatg 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 11 attcatatagattttaatgaatctaaacatatatgtgtgtctagattcattaacatcaat 70
|||||||| || |||||||||||| | |||| | ||||||||||| ||| |||||||
Sbjct: 83 attcatattaatgttaatgaatctagatggatatatatgtctagattcgttagcatcaat 24
Query: 71 atgaat 76
||||||
Sbjct: 23 atgaat 18
