miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46019_miR1030:micropc
Length = 144
Score = 139 bits (70), Expect = 6e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 ctgcatttgcacctgcacctttctacctttcttctccatcttcatcttcttcaccaccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ctgcatttgcacctgcacctttctacctttcttctccatcttcatcttcttcaccaccat 61
Query: 61 cataagacaa 70
||||||||||
Sbjct: 62 cataagacaa 71
>45547_miR530:micropc
Length = 140
Score = 137 bits (69), Expect = 2e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 2 tgcatttgcacctgcacctttctacctttcttctccatcttcatcttcttcaccaccatc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcatttgcacctgcacctttctacctttcttctccatcttcatcttcttcaccaccatc 60
Query: 62 ataagacaa 70
|||||||||
Sbjct: 61 ataagacaa 69
>45211_miR530:micropc
Length = 140
Score = 137 bits (69), Expect = 2e-33
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 2 tgcatttgcacctgcacctttctacctttcttctccatcttcatcttcttcaccaccatc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcatttgcacctgcacctttctacctttcttctccatcttcatcttcttcaccaccatc 60
Query: 62 ataagacaa 70
|||||||||
Sbjct: 61 ataagacaa 69
>44837_miR1030:micropc
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 ctgcatttgcacctgcacctt 21
|||||||||||||||||||||
Sbjct: 109 ctgcatttgcacctgcacctt 89
>46800_miR1030:micropc
Length = 138
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ctgcatttgcacctgcacct 20
||||||||||||||||||||
Sbjct: 1 ctgcatttgcacctgcacct 20
>45414_miR530:micropc
Length = 141
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ctgcatttgcacctgcacct 20
||||||||||||||||||||
Sbjct: 2 ctgcatttgcacctgcacct 21
>45181_miR1030:micropc
Length = 138
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ctgcatttgcacctgcacct 20
||||||||||||||||||||
Sbjct: 1 ctgcatttgcacctgcacct 20
>44806_miR1030:micropc
Length = 138
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ctgcatttgcacctgcacct 20
||||||||||||||||||||
Sbjct: 1 ctgcatttgcacctgcacct 20
